ModuleFinder Online Supplemental Materials



We developed a rigorous scoring scheme, implemented as a C program called ModuleFinder, that evaluates the likelihood that a given genomic region is a cis regulatory module for an input set of transcription factors according to its degree of: (1) homotypic site clustering; (2) heterotypic site clustering; and (3) evolutionary conservation across multiple genomes.



Program

Sequences


Questions or problems should be directed to aphilippakis[at]receptor.med.harvard.edu and mlbulyk[at]receptor.med.harvard.edu