SOFTWARE GENRE v1.0 Code/Executables for GENRE http://thebrain.bwh.harvard.edu/glossary-GENRE/download/bin/GENRE/GENREscripts_v1.0.zip bin/GENRE/ glossary v1.5 Code/Executables for glossary and glossary+GENRE http://thebrain.bwh.harvard.edu/glossary-GENRE/download/bin/glossary/glossaryScripts_v1.5.zip bin/glossary/ GENOMES hg19 v1.0 human genome for UCSC hg19 http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/GENRE/hg19/hg19_genome.zip data/GENRE/hg19/ DATABASES hg19_dflt v1.0 default database for human genome hg19 (200bp): promoters, repeats, GC, CpG http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/GENRE/hg19/db/hg19_dflt.zip data/GENRE/hg19/db/ MOTIFS glossary-pwm v1.0 108 glossary modules in PWM format; appropriate for mammals and insects, but not worm or yeast http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/glossary/motifs/glossary-pwm.zip data/glossary/motifs/ glossary-kmer v1.0 108 glossary modules in 8mer format; appropriate for mammals and insects, but not worm or yeast http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/glossary/motifs/glossary-kmer.zip data/glossary/motifs/ glossaryDemo-pwm v1.0 5 glossary modules in PWM format; appropriate for mammals and insects, but not worm or yeast http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/glossary/motifs/glossaryDemo-pwm.zip data/glossary/motifs/ glossaryDemo-kmer v1.0 5 glossary modules in 8mer format; appropriate for mammals and insects, but not worm or yeast http://thebrain.bwh.harvard.edu/glossary-GENRE/download/data/glossary/motifs/glossaryDemo-kmer.zip data/glossary/motifs/