Input Cluster (n=200) YAL017W PSK1 YAL018C YAL026C DRS2 YAL053W YAL054C ACS1 YAR064W YBR039W ATP3 YBR049C REB1 YBR089C-A NHP6B YBR222C FAT2 YBR249C ARO4 YBR250W YCL034W LSB5 YCL035C GRX1 YCL040W GLK1 YCL042W YCL043C PDI1 YCR011C ADP1 YCR012W PGK1 YCR051W YCR087C-A YCR092C MSH3 YCR093W CDC39 YCR098C GIT1 YDL020C RPN4 YDL058W USO1 YDL059C RAD59 YDL073W YDL074C BRE1 YDL112W TRM3 YDR055W PST1 YDR113C PDS1 YDR115W YDR141C DOP1 YDR169C STB3 YDR253C MET32 YDR267C YDR268W MSW1 YDR382W RPP2B YDR438W YDR502C SAM2 YDR510W SMT3 YDR530C APA2 YDR531W YEL024W RIP1 YEL043W YEL044W IES6 YEL046C GLY1 YEL076C YEL076C-A YER043C SAH1 YER060W-A FCY22 YER062C HOR2 YER091C MET6 YER092W IES5 YER099C PRS2 YER100W UBC6 YER112W LSM4 YER114C BOI2 YER124C DSE1 YER177W BMH1 YFL017W-A SMX2 YFL018C LPD1 YFL023W BUD27 YFL024C EPL1 YFL031W HAC1 YFL033C RIM15 YFR030W MET10 YFR049W YMR31 YGL001C ERG26 YGL056C SDS23 YGR155W CYS4 YGR204W ADE3 YGR223C YGR224W AZR1 YGR286C BIO2 YHL004W MRP4 YHL036W MUP3 YHL038C CBP2 YHR001W-A QCR10 YHR033W YHR041C SRB2 YHR042W NCP1 YHR082C KSP1 YHR083W YHR089C GAR1 YHR099W TRA1 YHR112C YHR113W YHR136C SPL2 YHR137W ARO9 YIL031W ULP2 YIL046W MET30 YIL047C SYG1 YIL074C SER33 YIL088C YIL106W MOB1 YIL107C PFK26 YIL118W RHO3 YIL126W STH1 YIL127C YIR017C MET28 YIR018W YAP5 YJL012C VTC4 YJL052W TDH1 YJL054W TIM54 YJL060W BNA3 YJL062W LAS21 YJL063C MRPL8 YJL100W LSB6 YJL101C GSH1 YJL133W MRS3 YJL158C CIS3 YJL166W QCR8 YJL167W ERG20 YJL168C SET2 YJL186W MNN5 YJL187C SWE1 YJL209W CBP1 YJR001W YJR009C TDH2 YJR010W MET3 YJR058C APS2 YJR113C RSM7 YJR137C ECM17 YJR138W IML1 YKL001C MET14 YKL007W CAP1 YKL008C LAC1 YKL015W PUT3 YKL016C ATP7 YKL139W CTK1 YKL191W DPH2 YKL192C ACP1 YKL201C MNN4 YKR072C SIS2 YLL010C PSR1 YLL021W SPA2 YLR081W GAL2 YLR092W SUL2 YLR149C YLR150W STM1 YLR155C ASP3-1 YLR157C ASP3-2 YLR158C ASP3-3 YLR160C ASP3-4 YLR174W IDP2 YLR283W YML004C GLO1 YML017W PSP2 YML119W YML120C NDI1 YML121W GTR1 YML123C PHO84 YMR083W ADH3 YMR196W YMR217W GUA1 YMR255W GFD1 YMR271C URA10 YMR301C ATM1 YMR308C PSE1 YNL036W NCE103 YNL037C IDH1 YNL063W YNL080C YNL094W APP1 YNL095C YNL103W MET4 YNL220W ADE12 YNL221C POP1 YNL232W CSL4 YNL259C ATX1 YNL277W MET2 YNL282W POP3 YOL064C MET22 YOL100W PKH2 YOR001W RRP6 YOR065W CYT1 YOR098C NUP1 YOR099W KTR1 YOR163W DDP1 YOR298C-A MBF1 YOR299W BUD7 YOR377W ATF1 YPL018W CTF19 YPL019C VTC3 YPL068C YPL096W PNG1 YPL170W YPL171C OYE3 YPL189W GUP2 YPL190C NAB3 YPL204W HRR25 YPL206C YPL235W RVB2 YPL236C YPL250C ICY2 YPL254W HFI1 YPR102C RPL11A YPR103W PRE2 Genes Not Found: MIPS Functional Classification Category p-value In Category from Cluster k f amino acid metabolism 1.00253e-12 ARO4 MET32 SAM2 GLY1 MET6 LPD1 MET10 CYS4 ADE3 MUP3 YHR033W YHR112C ARO9 MET30 SER33 MET28 MET3 ECM17 MET14 PUT3 DPH2 SUL2 ASP3-1 ASP3-2 ASP3-3 ASP3-4 GLO1 MET4 MET2 MET22 30 204 METABOLISM 1.59291e-08 ACS1 FAT2 ARO4 GLK1 PDI1 PGK1 GIT1 MET32 SAM2 APA2 GLY1 SAH1 FCY22 HOR2 MET6 PRS2 LPD1 HAC1 MET10 ERG26 CYS4 ADE3 BIO2 MUP3 YHR033W NCP1 YHR112C ARO9 MET30 SER33 PFK26 MET28 TDH1 BNA3 ERG20 MNN5 TDH2 MET3 ECM17 MET14 PUT3 DPH2 ACP1 GAL2 SUL2 STM1 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 GLO1 GTR1 PHO84 ADH3 GUA1 URA10 IDH1 MET4 ADE12 CSL4 MET2 MET22 KTR1 BUD7 ATF1 66 1066 amino acid biosynthesis 2.5998e-08 ARO4 GLY1 MET6 LPD1 MET10 CYS4 ADE3 MUP3 YHR033W YHR112C SER33 MET3 ECM17 MET14 DPH2 SUL2 MET2 MET22 18 118 amino acid degradation (catabolism) 9.54358e-05 SAM2 GLY1 ASP3-1 ASP3-2 ASP3-3 ASP3-4 GLO1 7 35 regulation of amino acid metabolism 0.000527982 MET32 ARO9 MET30 MET28 PUT3 MET4 6 33 nitrogen and sulfur metabolism 0.00121124 MET32 MET10 MET28 BNA3 MET3 ECM17 MET14 MET4 8 67 mitochondrion 0.00289742 ACS1 ATP3 MSW1 RIP1 LPD1 YMR31 MRP4 CBP2 QCR10 TIM54 MRPL8 MRS3 QCR8 CBP1 RSM7 ATP7 ACP1 NDI1 ADH3 ATM1 IDH1 CYT1 22 366 MIPS Phenotypes Category p-value In Category from Cluster k f Methionine auxotrophy (Met) 0.00233288 MET6 MET28 MET4 3 9 Auxotrophies, carbon and 0.00453614 ATP3 RIP1 GLY1 MET6 HAC1 CYS4 CBP2 STH1 MET28 MRPL8 CBP1 ACP1 STM1 ATM1 IDH1 MET4 HFI1 17 265 MIPS Subcellular Localization Category p-value In Category from Cluster k f mitochondrial inner membrane 0.00425513 ATP3 RIP1 QCR10 TIM54 MRS3 QCR8 ATP7 NDI1 ATM1 CYT1 10 118 MIPS Protein Complexes Category p-value In Category from Cluster k f Met4/Met28/Met32 complex 3.20315e-05 MET32 MET28 MET4 3 3 Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III) 0.000181761 RIP1 QCR10 QCR8 CYT1 4 10 Met4 complexes 0.000305393 MET32 MET28 MET4 3 5 Respiration chain complexes 0.00251429 ATP3 RIP1 QCR10 QCR8 ATP7 CYT1 6 44 Met4/Met28/Met31 complex 0.0029765 MET28 MET4 2 3 Cbf1/Met4/Met28 complex 0.0029765 MET28 MET4 2 3 MIPS Protein Classes Category p-value In Category from Cluster k f Leucine zipper factors 0.00172766 HAC1 MET28 YAP5 MET4 4 17 GO Molecular Function Category p-value In Category from Cluster k f enzyme [GO:0003824] 3.94989e-08 PSK1 DRS2 ACS1 ATP3 ARO4 GRX1 GLK1 PDI1 ADP1 PGK1 CDC39 RPN4 TRM3 MSW1 SAM2 APA2 RIP1 GLY1 SAH1 HOR2 MET6 PRS2 UBC6 LPD1 EPL1 RIM15 MET10 ERG26 CYS4 ADE3 BIO2 QCR10 KSP1 TRA1 ARO9 ULP2 MET30 SER33 PFK26 RHO3 STH1 TDH1 BNA3 LAS21 GSH1 QCR8 ERG20 SET2 MNN5 SWE1 TDH2 MET3 ECM17 MET14 ATP7 CTK1 PSR1 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 GLO1 NDI1 GTR1 ADH3 GUA1 URA10 ATM1 IDH1 ADE12 POP1 CSL4 MET2 POP3 MET22 PKH2 RRP6 KTR1 DDP1 ATF1 PNG1 OYE3 HRR25 RVB2 PRE2 86 1604 hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811] 6.00953e-06 BNA3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 PNG1 6 16 asparaginase [GO:0004067] 1.43638e-05 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 6 oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor [GO:0016668] 3.20315e-05 LPD1 MET10 ECM17 3 3 transporter [GO:0005215] 4.39084e-05 DRS2 ATP3 FAT2 ADP1 GIT1 RIP1 FCY22 LPD1 MET10 AZR1 MUP3 QCR10 NCP1 TIM54 MRS3 QCR8 ECM17 LAC1 ATP7 GAL2 SUL2 NDI1 PHO84 ATM1 PSE1 CYT1 OYE3 27 372 electron transporter [GO:0005489] 4.76857e-05 LPD1 MET10 NCP1 ECM17 CYT1 OYE3 6 22 oxidoreductase [GO:0016491] 0.000467975 GRX1 PDI1 RIP1 LPD1 MET10 ERG26 QCR10 SER33 TDH1 QCR8 TDH2 ECM17 IDP2 NDI1 ADH3 IDH1 OYE3 17 215 oxidoreductase, acting on sulfur group of donors [GO:0016667] 0.000596423 LPD1 MET10 ECM17 3 6 hydrolase, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810] 0.000857419 BNA3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 PNG1 6 36 sulfite reductase (NADPH) [GO:0004783] 0.00101352 MET10 ECM17 2 2 flavin-containing electron transporter [GO:0015933] 0.0010418 LPD1 MET10 ECM17 OYE3 4 15 carrier [GO:0005386] 0.00170709 DRS2 ATP3 ADP1 RIP1 FCY22 QCR10 MRS3 QCR8 ATP7 NDI1 PHO84 ATM1 PSE1 13 160 primary active transporter [GO:0015399] 0.00216403 DRS2 ATP3 ADP1 RIP1 QCR10 QCR8 ATP7 NDI1 ATM1 9 90 oxidoreductase, acting on diphenols and related substances as donors [GO:0016679] 0.00233288 RIP1 QCR10 QCR8 3 9 oxidoreductase, acting on diphenols and related substances as donors, cytochrome as acceptor [GO:0016681] 0.00233288 RIP1 QCR10 QCR8 3 9 ubiquinol-cytochrome c reductase [GO:0008121] 0.00233288 RIP1 QCR10 QCR8 3 9 glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [GO:0004365] 0.0029765 TDH1 TDH2 2 3 glyceraldehyde 3-phosphate dehydrogenase [GO:0008943] 0.0029765 TDH1 TDH2 2 3 transferase [GO:0016740] 0.00418089 PSK1 GLK1 PGK1 TRM3 SAM2 MET6 PRS2 EPL1 RIM15 BIO2 KSP1 TRA1 ARO9 PFK26 LAS21 ERG20 SET2 MNN5 SWE1 MET3 MET14 CTK1 URA10 MET2 PKH2 KTR1 ATF1 HRR25 28 522 GO Biological Process Category p-value In Category from Cluster k f sulfur metabolism [GO:0006790] 1.1624e-13 MET32 SAM2 SAH1 MET6 MET10 CYS4 BIO2 MET28 GSH1 MET3 ECM17 MET14 GLO1 MET4 MET2 MET22 16 44 amino acid metabolism [GO:0006520] 8.03513e-12 ARO4 MET32 SAM2 GLY1 SAH1 MET6 PRS2 LPD1 CYS4 ARO9 SER33 MET28 MET3 MET14 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 IDH1 MET4 MET2 MET22 24 140 amino acid and derivative metabolism [GO:0006519] 3.19174e-11 ARO4 MET32 SAM2 GLY1 SAH1 MET6 PRS2 LPD1 CYS4 ARO9 SER33 MET28 MET3 MET14 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 IDH1 MET4 MET2 MET22 24 149 amine metabolism [GO:0009308] 4.27383e-11 ARO4 MET32 SAM2 GLY1 SAH1 MET6 PRS2 LPD1 CYS4 ARO9 SER33 MET28 MET3 MET14 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 IDH1 MET4 MET2 MET22 24 151 sulfur amino acid metabolism [GO:0000096] 5.56566e-10 MET32 SAM2 SAH1 MET6 CYS4 MET28 MET3 MET14 MET4 MET2 MET22 11 29 aspartate family amino acid metabolism [GO:0009066] 2.81454e-09 SAM2 GLY1 SAH1 MET6 MET3 MET14 ASP3-1 ASP3-2 ASP3-3 ASP3-4 MET2 MET22 12 41 cell growth and/or maintenance [GO:0008151] 1.95597e-07 DRS2 ACS1 ATP3 REB1 NHP6B FAT2 ARO4 LSB5 GRX1 GLK1 PDI1 ADP1 PGK1 MSH3 CDC39 GIT1 RPN4 USO1 RAD59 BRE1 TRM3 PDS1 YDR115W DOP1 MET32 MSW1 RPP2B SAM2 SMT3 APA2 RIP1 GLY1 SAH1 HOR2 MET6 PRS2 UBC6 LSM4 BOI2 DSE1 BMH1 SMX2 LPD1 BUD27 EPL1 HAC1 RIM15 MET10 YMR31 ERG26 CYS4 ADE3 AZR1 BIO2 MRP4 MUP3 CBP2 QCR10 SRB2 NCP1 KSP1 GAR1 TRA1 SPL2 ARO9 ULP2 MET30 SER33 MOB1 PFK26 RHO3 STH1 MET28 YAP5 VTC4 TDH1 TIM54 BNA3 LAS21 MRPL8 LSB6 GSH1 MRS3 CIS3 QCR8 ERG20 SET2 MNN5 SWE1 CBP1 TDH2 MET3 APS2 RSM7 ECM17 MET14 CAP1 PUT3 ATP7 CTK1 DPH2 ACP1 MNN4 SIS2 PSR1 SPA2 GAL2 SUL2 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 GLO1 NDI1 GTR1 PHO84 ADH3 GUA1 GFD1 URA10 ATM1 PSE1 IDH1 APP1 MET4 ADE12 POP1 CSL4 ATX1 MET2 POP3 MET22 PKH2 RRP6 CYT1 NUP1 KTR1 DDP1 MBF1 BUD7 ATF1 CTF19 VTC3 PNG1 NAB3 HRR25 RVB2 HFI1 RPL11A PRE2 151 3657 asparagine catabolism [GO:0006530] 1.00738e-06 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 4 amine catabolism [GO:0009310] 1.10457e-06 GLY1 LPD1 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 7 19 amino acid catabolism [GO:0009063] 1.10457e-06 GLY1 LPD1 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 7 19 metabolism [GO:0008152] 1.31112e-06 DRS2 ACS1 REB1 NHP6B ARO4 GRX1 GLK1 PDI1 PGK1 MSH3 CDC39 RPN4 USO1 RAD59 TRM3 PDS1 YDR115W MET32 MSW1 RPP2B SAM2 SMT3 APA2 RIP1 GLY1 SAH1 HOR2 MET6 PRS2 UBC6 LSM4 BMH1 SMX2 LPD1 EPL1 HAC1 RIM15 MET10 YMR31 ERG26 CYS4 ADE3 BIO2 MRP4 CBP2 QCR10 SRB2 NCP1 KSP1 GAR1 TRA1 ARO9 ULP2 MET30 SER33 PFK26 RHO3 STH1 MET28 YAP5 TDH1 TIM54 BNA3 LAS21 MRPL8 GSH1 MRS3 QCR8 ERG20 SET2 MNN5 CBP1 TDH2 MET3 RSM7 ECM17 MET14 PUT3 CTK1 DPH2 ACP1 MNN4 GAL2 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 GLO1 NDI1 ADH3 GUA1 GFD1 URA10 PSE1 IDH1 MET4 ADE12 POP1 CSL4 ATX1 MET2 POP3 MET22 PKH2 RRP6 CYT1 NUP1 KTR1 DDP1 MBF1 ATF1 PNG1 NAB3 HRR25 RVB2 HFI1 RPL11A PRE2 119 2693 sulfur utilization [GO:0006791] 1.63162e-06 MET10 MET3 ECM17 MET14 MET22 5 8 sulfate assimilation [GO:0000103] 1.63162e-06 MET10 MET3 ECM17 MET14 MET22 5 8 aspartate family amino acid catabolism [GO:0009068] 1.63162e-06 GLY1 ASP3-1 ASP3-2 ASP3-3 ASP3-4 5 8 methionine metabolism [GO:0006555] 1.65367e-06 SAM2 SAH1 MET6 MET3 MET14 MET2 MET22 7 20 serine family amino acid metabolism [GO:0009069] 3.85802e-06 GLY1 SAH1 LPD1 CYS4 SER33 MET2 6 15 response to nitrogen starvation [GO:0006995] 4.91078e-06 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 5 glutamine family amino acid catabolism [GO:0009065] 6.96698e-06 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 5 10 asparagine metabolism [GO:0006528] 1.43638e-05 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 6 serine family amino acid biosynthesis [GO:0009070] 3.26781e-05 GLY1 LPD1 CYS4 SER33 4 7 sulfur amino acid biosynthesis [GO:0000097] 3.26781e-05 CYS4 MET28 MET2 MET22 4 7 oxidative phosphorylation [GO:0006119] 7.2839e-05 RIP1 QCR10 QCR8 NDI1 CYT1 5 15 glutamine family amino acid metabolism [GO:0009064] 7.8446e-05 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 IDP2 IDH1 7 34 amino acid biosynthesis [GO:0008652] 0.000109626 ARO4 GLY1 PRS2 LPD1 CYS4 SER33 MET28 IDP2 IDH1 MET2 MET22 11 89 energy pathways [GO:0006091] 0.000151393 ACS1 PGK1 YDR115W RIP1 HOR2 BMH1 QCR10 TDH1 QCR8 CBP1 TDH2 IDP2 ADH3 IDH1 ATF1 15 159 energy derivation by oxidation of organic compounds [GO:0015980] 0.000151393 ACS1 PGK1 YDR115W RIP1 HOR2 BMH1 QCR10 TDH1 QCR8 CBP1 TDH2 IDP2 ADH3 IDH1 ATF1 15 159 regulation of transcription from Pol II promoter [GO:0006357] 0.000158001 REB1 NHP6B CDC39 EPL1 HAC1 TRA1 MET28 YAP5 PUT3 CTK1 MET4 MBF1 NAB3 RVB2 14 142 oxidative phosphorylation, ubiquinone to cytochrome c [GO:0006122] 0.000181761 RIP1 QCR10 QCR8 CYT1 4 10 amine biosynthesis [GO:0009309] 0.000198295 ARO4 GLY1 PRS2 LPD1 CYS4 SER33 MET28 IDP2 IDH1 MET2 MET22 11 95 catabolism [GO:0009056] 0.000323855 PGK1 CDC39 RPN4 SMT3 GLY1 UBC6 LPD1 ULP2 MET30 PFK26 TDH1 CBP1 TDH2 PUT3 ASP3-1 ASP3-2 ASP3-3 ASP3-4 CSL4 PNG1 PRE2 21 289 electron transport [GO:0006118] 0.000330073 RIP1 QCR10 QCR8 NDI1 CYT1 5 20 response to starvation [GO:0009267] 0.000407383 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 12 purine ribonucleoside metabolism [GO:0046128] 0.00101352 ADE12 DDP1 2 2 fermentation [GO:0006113] 0.0010418 ACS1 HOR2 ADH3 ATF1 4 15 transcription from Pol II promoter [GO:0006366] 0.00192896 REB1 NHP6B CDC39 EPL1 HAC1 SRB2 TRA1 MET28 YAP5 PUT3 CTK1 MET4 MBF1 NAB3 RVB2 HFI1 16 223 biosynthesis [GO:0009058] 0.00267998 ACS1 ARO4 PGK1 MSW1 RPP2B GLY1 HOR2 PRS2 LPD1 YMR31 ERG26 CYS4 ADE3 BIO2 MRP4 NCP1 SER33 MET28 TDH1 BNA3 LAS21 MRPL8 GSH1 ERG20 MNN5 TDH2 RSM7 ACP1 MNN4 IDP2 URA10 IDH1 ADE12 MET2 MET22 KTR1 RPL11A 37 731 phosphorylation [GO:0016310] 0.0029212 RIP1 RIM15 QCR10 KSP1 QCR8 CTK1 NDI1 PKH2 CYT1 9 94 ribonucleoside metabolism [GO:0009119] 0.0029765 ADE12 DDP1 2 3 purine nucleoside metabolism [GO:0042278] 0.0029765 ADE12 DDP1 2 3 glycine metabolism [GO:0006544] 0.0029765 GLY1 LPD1 2 3 response to stress [GO:0006950] 0.00437283 GRX1 RAD59 HOR2 HAC1 RIM15 CAP1 MNN4 SIS2 PSR1 ASP3-1 ASP3-2 ASP3-3 ASP3-4 ATX1 14 199 GO Cellular Component Category p-value In Category from Cluster k f cell [GO:0005623] 2.05307e-05 DRS2 ACS1 ATP3 REB1 NHP6B FAT2 LSB5 GRX1 GLK1 YCL042W PDI1 ADP1 PGK1 MSH3 CDC39 GIT1 RPN4 USO1 RAD59 PDS1 YDR115W MET32 MSW1 RPP2B SMT3 RIP1 FCY22 MET6 PRS2 UBC6 LSM4 BOI2 SMX2 LPD1 EPL1 HAC1 YMR31 ERG26 SDS23 CYS4 ADE3 AZR1 MRP4 MUP3 CBP2 QCR10 YHR033W SRB2 NCP1 KSP1 GAR1 TRA1 YHR113W SPL2 ULP2 MET30 SYG1 MOB1 PFK26 RHO3 STH1 MET28 YAP5 VTC4 TDH1 TIM54 LAS21 MRPL8 LSB6 GSH1 MRS3 CIS3 QCR8 ERG20 SET2 MNN5 SWE1 CBP1 TDH2 APS2 RSM7 CAP1 LAC1 PUT3 ATP7 CTK1 ACP1 SIS2 PSR1 SPA2 GAL2 SUL2 STM1 ASP3-1 IDP2 NDI1 GTR1 PHO84 ADH3 GFD1 ATM1 PSE1 NCE103 IDH1 APP1 MET4 POP1 CSL4 ATX1 MET2 POP3 MET22 PKH2 RRP6 CYT1 NUP1 KTR1 MBF1 CTF19 VTC3 PNG1 GUP2 NAB3 HRR25 RVB2 HFI1 RPL11A PRE2 128 3106 intracellular [GO:0005622] 7.66378e-05 DRS2 ACS1 ATP3 REB1 NHP6B FAT2 LSB5 GRX1 GLK1 YCL042W PDI1 ADP1 PGK1 MSH3 CDC39 GIT1 RPN4 RAD59 PDS1 YDR115W MET32 MSW1 RPP2B SMT3 RIP1 MET6 PRS2 UBC6 LSM4 SMX2 LPD1 EPL1 HAC1 YMR31 ERG26 SDS23 CYS4 ADE3 MRP4 CBP2 QCR10 YHR033W SRB2 KSP1 GAR1 TRA1 YHR113W SPL2 ULP2 MET30 SYG1 PFK26 RHO3 STH1 MET28 YAP5 VTC4 TDH1 TIM54 LAS21 MRPL8 LSB6 GSH1 MRS3 CIS3 QCR8 ERG20 SET2 MNN5 SWE1 CBP1 TDH2 APS2 RSM7 CAP1 LAC1 PUT3 ATP7 CTK1 ACP1 SIS2 PSR1 SPA2 GAL2 SUL2 STM1 ASP3-1 IDP2 NDI1 GTR1 PHO84 ADH3 GFD1 ATM1 PSE1 NCE103 IDH1 APP1 MET4 POP1 CSL4 ATX1 MET2 POP3 MET22 PKH2 RRP6 CYT1 NUP1 KTR1 MBF1 CTF19 VTC3 PNG1 NAB3 HRR25 RVB2 HFI1 RPL11A PRE2 120 2921 periplasmic space (sensu Fungi) [GO:0030287] 0.000111843 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 9 respiratory chain complex III (sensu Eukarya) [GO:0005750] 0.000181761 RIP1 QCR10 QCR8 CYT1 4 10 respiratory chain complex III [GO:0045275] 0.000181761 RIP1 QCR10 QCR8 CYT1 4 10 mitochondrial electron transport chain complex (sensu Eukarya) [GO:0005746] 0.00143298 RIP1 QCR10 QCR8 NDI1 CYT1 5 27 cytoplasm [GO:0005737] 0.0029597 DRS2 ACS1 ATP3 FAT2 GRX1 GLK1 YCL042W PDI1 ADP1 PGK1 CDC39 RPN4 PDS1 YDR115W MSW1 RPP2B RIP1 MET6 PRS2 UBC6 LPD1 YMR31 ERG26 SDS23 CYS4 ADE3 MRP4 CBP2 QCR10 YHR033W YHR113W SPL2 PFK26 VTC4 TDH1 TIM54 LAS21 MRPL8 LSB6 MRS3 CIS3 QCR8 ERG20 MNN5 CBP1 TDH2 APS2 RSM7 CAP1 LAC1 ATP7 ACP1 SIS2 SPA2 STM1 ASP3-1 IDP2 NDI1 GTR1 ADH3 GFD1 ATM1 PSE1 NCE103 IDH1 APP1 CSL4 ATX1 MET2 MET22 CYT1 KTR1 VTC3 PNG1 RPL11A PRE2 76 1810 SMART Domains Category p-value In Category from Cluster k f BRLZ 0.0010418 HAC1 MET28 YAP5 MET4 4 15 PFam-A Domains Category p-value In Category from Cluster k f PF00710 (Asparaginase) 3.26781e-05 ASP3-1 ASP3-2 ASP3-3 ASP3-4 4 7 PF00667 (FAD_binding) 0.0029765 MET10 NCP1 2 3 PF02800 (gpdh_C) 0.0029765 TDH1 TDH2 2 3 PF00044 (gpdh) 0.0029765 TDH1 TDH2 2 3 PF03105 (SPX) 0.00325479 SYG1 VTC4 VTC3 3 10 Yeast Two Hybrid - Uetz Category p-value In Category from Cluster k f YNL311C 0.00101352 SER33 MET14 2 2 Yeast Two Hybrid - Ito (core) Category p-value In Category from Cluster k f Yeast Two Hybrid - Ito (full) Category p-value In Category from Cluster k f Synthetic Genetic Array Analysis Category p-value In Category from Cluster k f MDS Proteomics Complexes Category p-value In Category from Cluster k f YDR523C (SPS1) 0.00135467 ATP3 YHR033W PHO84 IDH1 4 16 YGL237C (HAP2) 0.00360755 ATP3 SAH1 CYS4 PSE1 YNL063W 5 33 Cellzome Complexes Category p-value In Category from Cluster k f Proteome Localization--Observed Category p-value In Category from Cluster k f Proteome Localization--Predicted+Observed Category p-value In Category from Cluster k f Deletions Consortium (Essentiality, Morphology) Category p-value In Category from Cluster k f Yeast Fitness Data Category p-value In Category from Cluster k f Published Complexes Category p-value In Category from Cluster k f