Cbf1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 induced 0.15 0.132274085138163 0.0198411127707244 -0.00391460684202457 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed -0.09 0.0961869865571322 0.0086568287901419 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed -0.25 0.0962850074682599 0.024071251867065 7. Expression during the cell Cycle (cdc28)(9) 56 repressed -0.17 0.10477501867065 0.0178117531740105 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced 0.29 0.103958644510829 0.0301480069081404 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced -0.11 0.0982127520537715 -0.0108034027259149 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed -0.03 0.0968834017923824 0.00290650205377147 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(5) 83 repressed -0.433 0.10527212471994 0.045582830003734 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(6) 84 repressed -0.74 0.104312920089619 0.0771915608663181 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed 0.152 0.10023571695295 -0.0152358289768484 12. Expression in tup1-deleted cells(1) 96 induced 0.275 0.0958980582524272 0.0263719660194175 15. evolved strain 1 versus evolved strain 1(1) 99 repressed 0 0.0954859036594474 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.101634148618372 0 32. Young: Expression in swi2 mutant(1) 116 induced -0.314 0.103873693054518 -0.0326163396191187 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.130233383121733 0 42. Young: Expression in rap1 deletion mutant(1) 132 repressed -0.03 0.109465085884989 0.00328395257654967 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed -0.907 0.0990407953696789 0.0898300014002988 46. Expression in swi1 mutant cells in YPD(1) 136 induced -0.526 0.101773244958925 -0.0535327268483946 72. Expression in response to overproduction of activated Bni1p(1) 177 induced 0.022 0.109754480955937 0.00241459858103061 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.063 0.122876213592233 0.00774120145631068 102. Young: Expression in taf25_2 deletion mutant(1) 208 repressed -0.64 0.0956628080657207 0.0612241971620612 105. Young: Expression in taf90 deletion mutant(1) 211 repressed -0.004 0.104086071695295 0.00041634428678118 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0 0.111125373412995 0 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.046 0.102380507841673 0.00470950336071696 131. Rosetta 2000: Expression in cbp2 deletion mutant (1) 250 induced 0.03 0.119931385362211 0.00359794156086633 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 repressed -0.076 0.131984223300971 0.0100308009708738 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 repressed 0.103 0.122585418222554 -0.0126262980769231 137. Rosetta 2000: Expression in clb2 deletion mutant (1) 256 induced 0.003 0.103241224794623 0.000309723674383869 141. Rosetta 2000: Expression in cnb1 deletion mutant (1) 260 induced -0.196 0.114384802091113 -0.0224194212098582 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed -0.02 0.109785754294249 0.00219571508588498 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 repressed -0.066 0.118528752800597 0.0078228976848394 160. Rosetta 2000: Expression in erd1 deletion mutant (1) 279 induced -0.219 0.124717606422704 -0.0273131558065722 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced -0.086 0.118600634802091 -0.0101996545929798 177. Rosetta 2000: Expression in gcn4 deletion mutant (1) 296 repressed 0.013 0.127584951456311 -0.00165860436893204 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced 0.063 0.1210856982823 0.0076283989917849 181. Rosetta 2000: Expression in gyp1 deletion mutant (1) 300 induced 0.086 0.118512415982076 0.0101920677744585 184. Rosetta 2000: Expression in hdf1 deletion mutant (1) 303 induced 0.12 0.0984531366691561 0.0118143764002987 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced 0.106 0.108916635548917 0.0115451633681852 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced 0.04 0.100798170276326 0.00403192681105304 193. Rosetta 2000: Expression in imp2 deletion mutant (1) 312 induced -0.033 0.102274551904406 -0.0033750602128454 198. Rosetta 2000: Expression in jnm1 deletion mutant (1) 317 induced 0.083 0.13191140776699 0.0109486468446602 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced -0.146 0.101467513069455 -0.0148142569081404 209. Rosetta 2000: Expression in mrpl33 deletion mutant (1) 328 induced 0.083 0.112824869305452 0.00936446415235252 210. Rosetta 2000: Expression in mrt4 deletion mutant (1) 329 repressed 0.163 0.111146377893951 -0.018116859596714 216. Rosetta 2000: Expression in pac2 deletion mutant (1) 335 induced -0.13 0.10411501120239 -0.0135349514563107 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 repressed -0.086 0.132226474981329 0.0113714768483943 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced 0.269 0.122668035847648 0.0329977016430173 222. Rosetta 2000: Expression in pet117 deletion mutant (1) 341 induced 0.113 0.119161221060493 0.0134652179798357 224. Rosetta 2000: Expression in pex12 deletion mutant (1) 343 induced -0.02 0.0994184092606423 -0.00198836818521285 225. Rosetta 2000: Expression in pfd2 (**14) deletion mutant (1) 344 repressed -0.322 0.10409353995519 0.0335181198655712 238. Rosetta 2000: Expression in rml2 (**13) deletion mutant (1) 357 repressed -0.355 0.100418222554145 0.0356484690067215 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed 0 0.146915608663181 0 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed 0.126 0.0980540515309933 -0.0123548104929052 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed -0.086 0.0972390776699029 0.00836256067961165 247. Rosetta 2000: Expression in rpl8a deletion mutant (1) 366 repressed 0.126 0.125895257654966 -0.0158628024645257 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed -0.442 0.132484129947722 0.0585579854368931 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed -0.196 0.117431852128454 0.023016643017177 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 repressed -0.04 0.127950429424944 0.00511801717699776 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced -0.345 0.0998263629574309 -0.0344400952203137 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 repressed 0 0.0983499813293503 0 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced -0.023 0.110679611650485 -0.00254563106796116 267. Rosetta 2000: Expression in sir3 deletion mutant (1) 386 induced 0.14 0.0982080843913368 0.0137491318147872 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced -0.08 0.115143297236744 -0.00921146377893952 273. Rosetta 2000: Expression in stb4 deletion mutant (1) 392 induced -0.013 0.0973483009708738 -0.00126552791262136 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 induced -0.04 0.134578976848394 -0.00538315907393576 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced -0.306 0.104027725914862 -0.0318324841299478 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 induced 0.01 0.13476568334578 0.0013476568334578 294. Rosetta 2000: Expression in utr4 deletion mutant (1) 413 repressed -0.106 0.108214619118745 0.011470749626587 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.103 0.0951199589245706 0.00979735576923077 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 repressed -0.05 0.129873506348021 0.00649367531740105 302. Rosetta 2000: Expression in yap1 deletion mutant (1) 421 induced -0.086 0.123211351755041 -0.0105961762509335 309. Rosetta 2000: Expression in yel008w deletion mutant (1) 428 repressed 0.06 0.11120425690814 -0.0066722554144884 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed 0.063 0.158501213592233 -0.00998557645631068 316. Rosetta 2000: Expression in yel059w deletion mutant (1) 435 repressed -0.003 0.099965926064227 0.000299897778192681 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced -0.226 0.0964171023151606 -0.0217902651232263 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 induced -0.365 0.115079817027633 -0.042004133215086 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced -0.113 0.120986277072442 -0.0136714493091859 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced -0.329 0.0983919902912621 -0.0323709648058252 333. Rosetta 2000: Expression in yhl013c deletion mutant (1) 452 repressed -0.043 0.102969100074683 0.00442767130321137 334. Rosetta 2000: Expression in yhl029c deletion mutant (1) 453 induced -0.02 0.0991322815533981 -0.00198264563106796 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed -0.073 0.158869958924571 0.0115975070014937 355. Rosetta 2000: Expression in ymr029c deletion mutant (1) 474 repressed -0.395 0.0990856049290515 0.0391388139469753 358. Rosetta 2000: Expression in ymr031w-a deletion mutant (1) 477 induced -0.229 0.102827203136669 -0.0235474295182972 368. Rosetta 2000: Expression in ymr237w deletion mutant (1) 487 induced -0.133 0.104733009708738 -0.0139294902912622 374. Rosetta 2000: Expression in ynd1 deletion mutant (1) 493 induced 0.096 0.0985324869305452 0.00945911874533234 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed 0.06 0.133349047796863 -0.00800094286781178 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed -0.03 0.138866224794623 0.00416598674383869 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.176 0.104209764749813 -0.0183409185959671 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced -0.007 0.0989054331590739 -0.000692338032113517 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.09 0.100373412994772 0.00903360716952948 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced -0.116 0.100204443614638 -0.011623715459298 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.01 0.107247012696042 0.00107247012696042 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(8) 534 repressed -0.44 0.108834017923824 0.0478869678864826 Expression in PDR1-3 mutant(1) 555 repressed 0.084 0.107078043315907 -0.00899455563853619 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(3) 559 induced 1.486 0.103513816280807 0.153821530993279 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(1) 564 induced -0.196 0.104588778939507 -0.0204994006721434 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(3) 566 induced -0.45 0.114469753547423 -0.0515113890963404 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(1) 571 induced -0.443 0.111334017923824 -0.049320969940254 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(2) 572 induced -0.009 0.119094940253921 -0.00107185446228529 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced 0.263 0.105273991784914 0.0276870598394324 PHO4c vs WT(1) 580 induced 0.287 0.0987121919342793 0.0283303990851382 pho80 vs WT(1) 581 induced 0.536 0.117095780433159 0.0627633383121732 PHO81c vs WT exp1(1) 583 induced 0.345 0.0997418782673637 0.0344109480022405 PHO81c vs WT exp2(1) 584 induced -0.168 0.129273711725168 -0.0217179835698282 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced 0.342 0.0962719380134429 0.0329250028005975 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced 0.187 0.104447348767737 0.0195316542195668 437. Expression in wild type versus strain PH2 (ure2 deletion) under steady state conditions in YPD(1) 594 induced 0.353 0.119572908887229 0.0422092368371918 438. Expression in wild type versus strain P40-1A (gln3 ure2 double deletion) under steady state conditions in YPD(1) 595 induced -1.188 0.0952511202389843 -0.113158330843913 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced -1.109 0.118178211351755 -0.131059636389096 465. Expression in rpd3 deletion(1) 622 repressed -0.407 0.103394790888723 0.0420816798917103 466. Expression in rpd3 deletion(1) 623 repressed -0.708 0.110671676624347 0.0783555470500377 469. Expression in hda1 deletion(1) 626 induced -0.865 0.124465552651232 -0.107662703043316 470. Expression in hda1 deletion(1) 627 induced -0.808 0.103598767737117 -0.0837078043315905 474. Expression in hda1 deletion(1) 631 induced -0.927 0.105680545182972 -0.097965865384615 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced -0.484 0.0975826176250933 -0.0472299869305451 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -1.292 0.0995799103808813 -0.128657244212099 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.335 0.12892643764003 -0.17211679424944 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced -1.208 0.140418689320388 -0.169625776699029 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(2) 648 induced 0 0.11244072068708 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced -0.731 0.105417289021658 -0.077060038274832 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced -0.285 0.0974691934279313 -0.0277787201269604 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced -0.58 0.11194501493652 -0.0649281086631816 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced -0.27 0.106876867064974 -0.028856754107543 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced -0.23 0.097345500373413 -0.022389465085885 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.45 0.0982921023151606 -0.0442314460418223 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.04 0.0974836631814787 -0.00389934652725915 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced -0.84 0.106320481702763 -0.0893092046303209 572. Brown enviromental changes :Hypo-osmotic shock - 5 min(1) 770 induced 0.23 0.0979686333084391 0.022532785660941 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced 0.06 0.135715552651232 0.00814293315907392 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.11 0.127952763256161 0.0140748039581777 580. Brown enviromental changes :aa starv 2 h(1) 778 induced -0.07 0.134819361463779 -0.00943735530246453 581. Brown enviromental changes :aa starv 4 h(1) 779 induced 0.11 0.128230955937267 0.0141054051530994 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.39 0.116341019417476 0.0453729975728156 583. Brown enviromental changes :Nitrogen Depletion 30 min.(1) 781 induced 0.68 0.142247479462285 0.0967282860343538 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 induced 0.84 0.154829163554892 0.130056497386109 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 induced 0.76 0.147303024645258 0.111950298730396 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 induced 0.39 0.124848300970874 0.0486908373786409 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced -0.43 0.121648151605676 -0.0523087051904407 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced -0.92 0.0970556385362211 -0.0892911874533234 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced -0.89 0.104407206870799 -0.0929224141150111 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced -0.64 0.118069454817028 -0.0755644510828979 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced -0.84 0.105128827483196 -0.0883082150858846 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced 0.15 0.137560212845407 0.0206340319268111 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced -0.263 0.127037434652726 -0.0334108453136669 mec1_plus_gamma_10_min 949 induced 0.862 0.101646284540702 0.0876190972740851 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0 0.097197068707991 0 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0 0.0997661501120239 0 YBL020W 1013 induced -0.16107 0.108283233756535 -0.0174411804611651 YDL047W 1032 induced 0.043573 0.114339058999253 0.00498209581777445 YDL132W 1037 induced -0.081278 0.117178398058252 -0.00952402583737861 YFL005W 1051 induced 0.01813 0.0979420276325616 0.00177568896097834 YFL024C 1052 induced -0.038714 0.101811053024645 -0.00394151310679611 YHR197W 1071 repressed -0.096099 0.111896471247199 0.0107531389903846 YKR079C 1094 induced 0.023856 0.100382281553398 0.00239471970873786 YLR086W 1102 induced -0.13392 0.0979522964899179 -0.0131177715459298 YLR163C 1105 induced 0.024031 0.10058999253174 0.00241727811053024 YLR359W 1112 induced -0.17753 0.100394884241972 -0.0178231037994773 YNL158W 1133 induced -0.15948 0.0993390589992532 -0.0158425931292009 YOR145C 1151 repressed 0.092612 0.0968175877520538 -0.00896647043689321 YPL063W 1167 induced 0.07536 0.0984241971620612 0.00741724749813293 YPL076W 1168 induced -0.059528 0.105729088872293 -0.00629384120238986 YPL243W 1174 induced -0.055892 0.0971853995519044 -0.00543188635175504 YBR029C 1182 induced -0.0054316 0.103086258401792 -0.000559923321135173 YGR198W 1196 induced 0.065856 0.105419622852875 0.00694251468259894 YHR085W 1199 repressed 0.07061 0.0989922516803585 -0.00698984289115011 YPL075W 1221 induced -0.076811 0.102223674383869 -0.00785190265309936 HMS1OE+ 1239 induced 0.0173115 0.112047703510082 0.00193971381931478 SPS18OE+ 1262 induced -0.0269955 0.0974229835698282 -0.0026299821529593