Gsm1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 induced -0.03 0.120112023898432 -0.00360336071695296 0.0494783786533504 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced 0.3 0.104937453323376 0.0314812359970128 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced 0.48 0.12120285660941 0.0581773711725168 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed -0.18 0.120348207617625 0.0216626773711725 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed -0.13 0.0983728528752801 0.0127884708737864 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed -0.11 0.0985978342046303 0.0108457617625093 6. Expression during the cell cycle (cdc15 arrest and release)(14) 37 repressed -0.32 0.0980456497386109 0.0313746079163555 7. Expression during the cell Cycle (cdc28)(2) 49 repressed 0.46 0.105742625093353 -0.0486416075429424 7. Expression during the cell Cycle (cdc28)(6) 53 repressed 0.33 0.105168969380134 -0.0347057598954442 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.06 0.124643390589993 -0.00747860343539958 7. Expression during the cell Cycle (cdc28)(16) 63 induced 0.19 0.116872199402539 0.0222057178864824 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced -0.16 0.105504107542943 -0.0168806572068709 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed -0.23 0.137102781926811 0.0315336398431665 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed -0.1 0.126704630321135 0.0126704630321135 8. Expression during the cell cycle (cell size selection and release)(7) 71 repressed -0.05 0.114178024645258 0.0057089012322629 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced -0.07 0.0974248506348021 -0.00681973954443615 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed 0.28 0.101804518297237 -0.0285052651232264 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.26 0.128851755041075 0.0335014563106795 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -0.16 0.11231282673637 -0.0179700522778192 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced 0 0.132170929798357 0 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced -1.029 0.100627333831217 -0.103545526512322 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -0.536 0.111905806572069 0.059981512322629 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(6) 84 repressed -0.705 0.0959302651232263 0.0676308369118745 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 repressed -0.566 0.116046489917849 0.0656823132935025 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -0.832 0.113749066467513 0.0946392233009708 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced 0.029 0.115115758028379 0.00333835698282299 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced 0.401 0.136874066467513 0.0548865006534727 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced 1.887 0.152187733383122 0.287178252893951 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced 2.251 0.185148431665422 0.416769119678865 12. Expression in tup1-deleted cells(1) 96 induced 0.322 0.195071882001494 0.0628131460044811 13. Expression in cells overexpressing Yap1p(1) 97 induced -0.578 0.112150392083645 -0.0648229266243468 14. Galactose-induced expression in med2-deleted cells(1) 98 repressed 0.136 0.104370799103809 -0.014194428678118 16. parental strain versus evolved strain 1(1) 100 repressed 0.38 0.110484036594473 -0.0419839339058997 17. parental strain versus evolved strain 2(1) 101 induced 0.91 0.122835138162808 0.111779975728155 18. parental strain versus evolved strain 3(1) 102 bimodal 0.94 0.137601755041075 0.12934564973861 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.134731609410007 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.120257188200149 0 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.13534353995519 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.124564040328603 0 28. Young: Expression in srb4 mutant(1) 112 repressed 0 0.109792289021658 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.10635782300224 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.140628734129948 0 32. Young: Expression in swi2 mutant(1) 116 induced 0 0.10777212471994 0 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.150004200896191 0 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.115463032113518 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(3) 124 induced 0 0.103133868558626 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced 0 0.121629480955937 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(6) 127 induced 0 0.0977875280059746 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(7) 128 induced 0 0.114453883495146 0 40. Young: Expression in sir3 deletion mutant(1) 130 repressed 0 0.0989035660941001 0 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.11948282300224 0 45. Expression in snf2 mutant cells in minimal medium(1) 135 bimodal 0.454 0.138012042569081 0.0626574673263628 46. Expression in swi1 mutant cells in YPD(1) 136 induced 0.152 0.103841486183719 0.0157839058999253 47. Expression in swi1 mutant cells in minimal medium(1) 137 bimodal 0.697 0.124816560866318 0.0869971429238236 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 induced 0.677 0.0972045369678865 0.0658074715272592 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 induced 0.117 0.101870799103809 0.0119188834951457 54. Expression in response to overproduction of Ste5p(1) 159 repressed -0.068 0.106393764002987 0.00723477595220312 55. Expression in response to overproduction of Ste11p(1) 160 repressed -0.041 0.12464572442121 0.00511047470126961 56. Expression in response to overproduction of Ste12p(1) 161 repressed -0.168 0.142526605675878 0.0239444697535475 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 repressed -0.025 0.102660567587752 0.0025665141896938 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.002 0.109860436893204 0.000219720873786408 62. Expression in response to osmotic shock in hog1 deletion mutant cells(1) 167 induced 0.153 0.125814507094847 0.0192496195855116 65. Expression in ste4 deletion mutant cells(1) 170 induced 0.062 0.125558719193428 0.00778464058999254 66. Expression in ste5 deletion mutant cells(1) 171 induced 0.133 0.105223114264376 0.013994674197162 70. Expression in ste18 deletion mutant cells(1) 175 repressed 0.044 0.101036221060493 -0.00444559372666169 71. Expression in bni1 deletion mutant cells(1) 176 induced 0.021 0.112054705003734 0.00235314880507841 72. Expression in response to overproduction of activated Bni1p(1) 177 induced -0.048 0.100013069454817 -0.00480062733383122 73. Expression in response to overproduction of activated Pkc1p(1) 178 induced 0.058 0.1067321695295 0.006190465832711 74. Expression in response to overproduction of activated Rho1p(1) 179 induced -0.041 0.0990795369678865 -0.00406226101568335 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(1) 181 induced -0.018 0.0992410380881255 -0.00178633868558626 77. Expression in tec1 deletion mutant cells(1) 183 induced 0.008 0.0971597274085138 0.00077727781926811 79. Expression in fus3 deletion mutant cells(1) 185 induced -0.039 0.122374439880508 -0.00477260315533981 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.124 0.124510828976848 0.0154393427931292 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.005 0.111862397311426 0.00055931198655713 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced 0.068 0.15478715459298 0.0105255265123226 94. Expression in response to 1ug/mL FK506(1) 200 induced 0.01 0.0996625280059746 0.000996625280059746 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced 0 0.0984886109036594 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 induced 0 0.119845500373413 0 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0 0.100230582524272 0 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.116877333831217 0 105. Young: Expression in taf90 deletion mutant(1) 211 repressed 0 0.0967424383868559 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.144735810306199 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0 0.0973235623599701 0 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced -0.05 0.146508121732636 -0.0073254060866318 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced -0.01 0.168497012696042 -0.00168497012696042 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.488 0.106609876773712 0.0520256198655715 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 bimodal -0.269 0.0965491971620612 -0.0259717340365945 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced 0.714 0.102296956684093 0.0730400270724424 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced 0.07 0.111808252427184 0.00782657766990288 125. Rosetta 2000: Expression in bub1 (haploid **2,10) deletion mutant (1) 244 induced 1.196 0.0992592419716206 0.118714053398058 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.199 0.120679144884242 0.0240151498319642 128. Rosetta 2000: Expression in bub3 (haploid **2) deletion mutant (1) 247 induced 0.226 0.108443334578043 0.0245081936146377 129. Rosetta 2000: Expression in bul1 deletion mutant (1) 248 induced 0.033 0.108728528752801 0.00358804144884243 130. Rosetta 2000: Expression in cat8 deletion mutant (1) 249 induced 0.043 0.102707710978342 0.00441643157206871 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced -0.14 0.140251120238984 -0.0196351568334578 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 induced 0.262 0.122317961165049 0.0320473058252428 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal 0.036 0.142763256161314 0.0051394772218073 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced -0.309 0.0977207804331591 -0.0301957211538462 142. Rosetta 2000: Expression in cue1 deletion mutant (1) 261 induced 0.209 0.10850354742345 0.022677241411501 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced -0.033 0.146372759522031 -0.00483030106422702 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced -0.289 0.103522684839432 -0.0299180559185958 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 induced -0.226 0.0972992905153099 -0.02198963965646 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed 0.053 0.112133121732636 -0.00594305545182971 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed 0.468 0.102923356982823 -0.0481681310679612 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced 0.16 0.102050504107543 0.0163280806572069 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 repressed 0.153 0.0955190440627334 -0.0146144137415982 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.223 0.100449962658701 0.0224003416728903 161. Rosetta 2000: Expression in erg2 deletion mutant (1) 280 induced 0.339 0.11570855115758 0.0392251988424196 164. Rosetta 2000: Expression in erg5 deletion mutant (1) 283 repressed -0.322 0.104922050037341 0.0337849001120238 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.186 0.105176904406273 0.0195629042195668 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced -0.13 0.122374439880508 -0.015908677184466 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced 0.173 0.119143017176998 0.0206117419716207 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced 0.14 0.138853622106049 0.0194395070948469 182. Rosetta 2000: Expression in hat2 deletion mutant (1) 301 induced 0.04 0.102214339058999 0.00408857356235996 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced -0.236 0.120106889469754 -0.0283452259148619 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 bimodal 0 0.108659447348768 0 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced 0.133 0.107161594473488 0.0142524920649739 194. Rosetta 2000: Expression in imp2 (**12) deletion mutant (1) 313 induced -0.08 0.108910100821509 -0.00871280806572072 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced 0.369 0.124619118745332 0.0459844548170275 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 repressed 0.319 0.102303491411501 -0.0326348137602688 198. Rosetta 2000: Expression in jnm1 deletion mutant (1) 317 induced 0.057 0.103248693054518 0.00588517550410753 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced 0.033 0.143698188946975 0.00474204023525018 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced 0.003 0.114362397311426 0.000343087191934278 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed -0.203 0.101609876773712 0.0206268049850635 205. Rosetta 2000: Expression in mak10 deletion mutant (1) 324 induced 0 0.112808999253174 0 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed 0.113 0.104011389096341 -0.0117532869678865 211. Rosetta 2000: Expression in msu1 deletion mutant (1) 330 induced -0.033 0.110101288274832 -0.00363334251306946 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.345 0.12863144137416 0.0443778472740852 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 induced 0.189 0.0980993278566094 0.0185407729648992 223. Rosetta 2000: Expression in pet127 deletion mutant (1) 342 induced -0.133 0.109294249439881 -0.0145361351755042 227. Rosetta 2000: Expression in ppr1 deletion mutant (1) 346 repressed -0.083 0.102306758775205 0.00849146097834201 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 bimodal 0.179 0.126781179985063 0.0226938312173263 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 induced 0.239 0.10869072068708 0.0259770822442121 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal -0.083 0.117868278566094 -0.0097830671209858 238. Rosetta 2000: Expression in rml2 (**13) deletion mutant (1) 357 induced -0.01 0.0983219753547423 -0.000983219753547423 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.146 0.100567587752054 0.0146828678117999 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced 0.943 0.119866038088125 0.113033673917102 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed 0.083 0.0976418969380134 -0.00810427744585511 247. Rosetta 2000: Expression in rpl8a deletion mutant (1) 366 repressed 0.16 0.0995719753547423 -0.0159315160567588 249. Rosetta 2000: Expression in rps24a (haploid) deletion mutant (1) 368 repressed -0.133 0.101390963405527 0.0134849981329351 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.043 0.127612490664675 -0.00548733709858102 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.272 0.12761855862584 0.0347122479462285 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.392 0.138759335324869 0.0543936594473487 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced 0.036 0.100143764002987 0.00360517550410753 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.229 0.182566747572816 -0.0418077851941749 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.046 0.110066280806572 0.00506304891710231 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced 1.05 0.122892550410754 0.129037177931292 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced 0.933 0.110803771471247 0.103379918782673 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced -0.166 0.102233009708738 -0.0169706796116505 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed -0.518 0.14003500746826 0.0725381338685587 269. Rosetta 2000: Expression in sod1 (haploid) deletion mutant (1) 388 induced 0.236 0.111164115011202 0.0262347311426437 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced 0.043 0.107155526512323 0.00460768764002989 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced -0.571 0.164642923823749 -0.0940111095033607 277. Rosetta 2000: Expression in ste2 (haploid) deletion mutant (1) 396 induced -0.482 0.0962948095593727 -0.0464140982076176 280. Rosetta 2000: Expression in ste4 (haploid) deletion mutant (1) 399 induced 0.206 0.125558719193428 0.0258650961538462 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced 0.442 0.105223114264376 0.0465086165048542 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced -0.186 0.107957897684839 -0.0200801689693801 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.299 0.132795929798357 0.0397059830097087 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.073 0.135621732636296 0.00990038648244961 287. Rosetta 2000: Expression in tom6 deletion mutant (1) 406 repressed -0.365 0.100400952203137 0.036646347554145 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 repressed -0.036 0.103846620612397 0.00373847834204629 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.757 0.226154779686333 0.171199168222554 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.13 0.149246639283047 0.0194020631067961 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.05 0.142069641523525 0.00710348207617625 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 induced 0.392 0.0978850821508589 0.0383709522031367 302. Rosetta 2000: Expression in yap1 deletion mutant (1) 421 induced 0.07 0.103276699029126 0.00722936893203882 303. Rosetta 2000: Expression in yap3 deletion mutant (1) 422 induced 0.12 0.10133355115758 0.0121600261389096 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced -0.233 0.156247666168783 -0.0364057062173264 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.638 0.0962350634802091 0.0613979705003734 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced 0.209 0.147599421209858 0.0308482790328603 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 induced 0.06 0.099872572815534 0.00599235436893204 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.452 0.111429705003734 0.0503662266616878 336. Rosetta 2000: Expression in yhl045w deletion mutant (1) 455 induced 0.136 0.0964572442120986 0.0131181852128454 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced 0.193 0.135502707244212 0.0261520224981329 341. Rosetta 2000: Expression in yhr039c deletion mutant (1) 460 induced 0.123 0.109961258401792 0.0135252347834204 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced 0.16 0.120695481702763 0.0193112770724421 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed 0.146 0.115772498132935 -0.0169027847274085 346. Rosetta 2000: Expression in yml005w deletion mutant (1) 465 repressed -0.083 0.0970691747572816 0.00805674150485437 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed -0.01 0.100751493651979 0.00100751493651979 362. Rosetta 2000: Expression in ymr044w deletion mutant (1) 481 repressed 0.017 0.0987042569081404 -0.00167797236743839 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced -0.007 0.151647684839432 -0.00106153379387602 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.04 0.159436613144137 -0.00637746452576548 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced -0.106 0.114731142643764 -0.012161501120239 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 induced 0.96 0.105889189693801 0.101653622106049 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced -0.076 0.125880321135176 -0.00956690440627338 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.196 0.127704910380881 0.0250301624346527 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced -0.073 0.104642457057506 -0.00763889936519794 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced -0.1 0.107833271097834 -0.0107833271097834 395. Rosetta 2000: Expression in response to 2-deoxy-D-glucose(1) 514 induced -0.076 0.0988484876773712 -0.00751248506348021 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced -0.133 0.157030899925317 -0.0208851096900672 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced -0.146 0.0975798170276326 -0.0142466532860344 401. Rosetta 2000: Expression in response to HU(1) 520 induced 0.409 0.116171583271098 0.0475141775578791 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 0.242 0.106706030619866 0.0258228594100076 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.216 0.103716392830471 0.0224027408513817 404. Rosetta 2000: Expression in response to MMS(1) 523 induced 0.701 0.102748319641524 0.0720265720687083 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.223 0.120309932785661 0.0268291150112024 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0 0.140596527259149 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 repressed -0.02 0.102221340552651 0.00204442681105302 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed -0.02 0.129383401792382 0.00258766803584764 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 induced 0.2 0.107395911127707 0.0214791822255414 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 bimodal -0.3 0.109960791635549 -0.0329882374906647 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 bimodal 0.44 0.146711165048544 0.0645529126213594 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed 0.13 0.107561146377894 -0.0139829490291262 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced 0.08 0.11768857356236 0.0094150858849888 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(12) 551 repressed 0 0.119013722927558 0 Expression in PDR1-3 mutant(1) 555 repressed 0.098 0.110094753547423 -0.0107892858476475 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(6) 562 repressed -1.274 0.0972148058252427 0.123851662621359 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced -0.044 0.101303678117999 -0.00445736183719196 Low-Pi vs High-Pi in WT (NBW7) exp2(1) 578 induced 0.138 0.0976969753547424 0.0134821825989545 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.623 0.11455143764003 0.0713655456497387 PHO81c vs WT exp2(1) 584 induced -0.059 0.138701923076923 -0.00818341346153846 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced 1.284 0.138248226288275 0.177510722554145 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced 0.825 0.0995752427184466 0.0821495752427184 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 2.136 0.174828696788648 0.373434096340552 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced 0.72 0.171422236743839 0.123424010455564 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced 0.77 0.127327296489918 0.0980420182972369 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced 1.729 0.110334671396565 0.190768646844661 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced 0.477 0.16763069454817 0.0799598412994771 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced 1.625 0.134716206123973 0.218913834951456 440. Expression in strain TS19-4c in response to 30 min 50 nM treatment with rapamycin in YPD(1) 597 induced 0.351 0.103616504854369 0.0363693932038835 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0 0.173552091112771 0 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 1.79 0.15018717326363 0.268835040141898 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced 2.197 0.150379480955937 0.330383719660194 449. Expression in response to 0.1% MMS for 60 min(1) 606 repressed 0.516 0.10523431665422 -0.0543009073935775 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced 0.379 0.116336351755041 0.0440914773151605 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 induced 0 0.122118651979089 0 455. Expression in response to high MNNG (27 microgram/ml) for 60 min(1) 612 induced 0 0.0985772964899179 0 458. Expression of S arrested cells (with hydroxyurea) in response to 0.1% MMS for 60 min(1) 615 repressed 0.263 0.103742531740105 -0.0272842858476476 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed 0 0.10515216579537 0 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed -0.171 0.132879947722181 0.022722471060493 461. Expression of rpn4 deletion in response to 0.1% MMS for 60 min(1) 618 repressed 0.189 0.102021564600448 -0.0192820757094847 468. Expression in sin33 deletion(1) 625 repressed 1.419 0.110891056758775 -0.157354409540702 469. Expression in hda1 deletion(1) 626 induced -0.171 0.175480769230769 -0.0300072115384615 470. Expression in hda1 deletion(1) 627 induced -0.45 0.126877333831217 -0.0570948002240477 474. Expression in hda1 deletion(1) 631 induced -0.663 0.121446041822255 -0.0805187257281551 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced -0.247 0.106200056011949 -0.0262314138349514 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced 0.015 0.125299663928305 0.00187949495892457 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced 1.24 0.123601101568335 0.153265365944735 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced 1.374 0.141404499626587 0.194289782486931 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.932 0.135667008961912 -0.262108661314414 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 repressed -1.018 0.100280526512323 0.102085575989545 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced -1.502 0.110917195668409 -0.16659762789395 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 induced 0 0.126470780433159 0 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced 0 0.113638442867812 0 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0 0.121142643764003 0 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 induced 0 0.101837191934279 0 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 bimodal 0 0.109070668409261 0 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 0 0.108550224047797 0 482. Expression in response to acid: 10,20,40,60,80,100 min(6) 662 induced 0 0.102566747572816 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced 0 0.119085138162808 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 induced 0 0.114375933532487 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0 0.10095500373413 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0 0.109734410007468 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 0.123 0.120144697535474 0.0147777977968633 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0 0.119386669156087 0 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0 0.133274365197909 0 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced 0 0.132744118745332 0 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 induced 0 0.137899551904406 0 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced 0 0.108539021657954 0 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 0.996 0.135424757281553 0.134883058252427 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 induced 0 0.125457897684839 0 486. Expression in response to NaCl: 15 30 45 60 120 min(4) 679 induced 0 0.106200056011949 0 486. Expression in response to NaCl: 15 30 45 60 120 min(5) 680 induced 0 0.105586725168036 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced 0 0.146630414488424 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 0.194 0.143343913368185 0.0278087191934279 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 induced 0 0.133007374906647 0 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0 0.165828043315907 0 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced 1.55 0.144602781926811 0.224134311986557 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 2 0.158324775952203 0.316649551904406 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 1.6 0.157012696041822 0.251220313666915 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced 1.68 0.155498506348021 0.261237490664675 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced 0 0.130239451082898 0 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 induced 0 0.127936893203883 0 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 induced 1 0.113249159820762 0.113249159820762 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed 0.03 0.135177371172517 -0.00405532113517551 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.76 0.134976194921583 0.102581908140403 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -1.29 0.165137229275579 0.213027025765497 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.83 0.12415141896938 0.103045677744585 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed -0.22 0.118723394324122 0.0261191467513068 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed -0.97 0.09754714339059 0.0946207290888723 506. Brown enviromental changes :37C to 25C shock - 60 min(1) 704 induced -1.29 0.108834951456311 -0.140397087378641 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced 1.68 0.149983663181479 0.251972554144885 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 1.09 0.177006161314414 0.192936715832711 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 1.35 0.16570855115758 0.223706544062733 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 1.32 0.155194174757282 0.204856310679612 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced 0.74 0.162950429424944 0.120583317774459 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced -0.54 0.135851848394324 -0.073359998132935 515. Brown enviromental changes :29C to 33C - 30 minutes(1) 713 repressed -0.54 0.115155899925317 0.0621841859596712 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 0.85 0.156966952949963 0.133421910007469 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced 0.18 0.133435399551904 0.0240183719193427 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed -0.14 0.107366971620612 0.0150313760268857 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 bimodal -0.47 0.11246359223301 -0.0528578883495147 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed -0.6 0.129544436146378 0.0777266616878268 523. Brown enviromental changes :constant 0.32 mM H2O2 (10 min) redo(1) 721 induced 0 0.0981950149365198 0 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced 1.5 0.122546209858103 0.183819314787154 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 1.45 0.151747106049291 0.220033303771472 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0.89 0.145175504107543 0.129206198655713 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.99 0.13589712471994 0.134538153472741 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced 0 0.129876773711725 0 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0 0.163135268857356 0 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced 0 0.150439693801344 0 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0 0.151074495892457 0 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 induced 0.59 0.124459017923824 0.0734308205750561 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced 1.04 0.13448002240478 0.139859223300971 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 induced 0.58 0.110926997759522 0.0643376587005228 538. Brown enviromental changes :1 mM Menadione (80 min) redo(1) 736 induced 0.78 0.099556572068708 0.0776541262135922 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 induced 0.72 0.109361930545183 0.0787405899925318 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 1.22 0.121848394324122 0.148655041075429 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 induced 0 0.104323655713219 0 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 induced -0.04 0.134568241224795 -0.0053827296489918 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 repressed -1.12 0.10056572068708 0.11263360716953 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -0.6 0.13933999253174 0.083603995519044 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed -0.22 0.113099794622853 0.0248819548170277 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 induced 0.3 0.101232729648992 0.0303698188946976 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced 1.17 0.143823749066468 0.168273786407768 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced 0.39 0.106597274085138 0.0415729368932038 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced 0.26 0.174504761015683 0.0453712378640776 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced 1.26 0.185954536967886 0.234302716579536 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced 1.08 0.177472927557879 0.191670761762509 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced 0.79 0.15515216579537 0.122570210978342 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced 0.78 0.156905806572069 0.122386529126214 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced 0.37 0.136618278566094 0.0505487630694548 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced 0.26 0.117791262135922 0.0306257281553397 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.4 0.109933252427184 -0.0439733009708736 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced -0.2 0.132825802837939 -0.0265651605675878 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced 1.18 0.124630321135176 0.147063778939508 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced 0.65 0.133012976101568 0.0864584344660192 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced 0.19 0.174089339058999 0.0330769744212098 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed -0.67 0.117289488424197 0.078583957244212 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed -2.12 0.107085511575803 0.227021284540702 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed -0.51 0.121774178491412 0.0621048310306201 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed -0.43 0.115425224047797 0.0496328463405527 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced 1.15 0.107594753547423 0.123733966579536 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.11 0.110286127707244 0.0121314740477968 581. Brown enviromental changes :aa starv 4 h(1) 779 induced 0.34 0.120238050784167 0.0408809372666168 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.31 0.126976288274832 0.0393626493651979 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 induced 0.56 0.104862770724421 0.0587231516056758 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed -0.22 0.134796023151606 0.0296551250933533 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.2 0.143023244958925 0.028604648991785 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 induced 1.56 0.122765123226288 0.191513592233009 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 induced 1.77 0.136819454817028 0.24217043502614 589. Brown enviromental changes :Nitrogen Depletion 1 d(1) 787 induced 1.83 0.106340552651232 0.194603211351755 590. Brown enviromental changes :Nitrogen Depletion 2 d(1) 788 induced 1.73 0.11725074682599 0.202843792008963 591. Brown enviromental changes :Nitrogen Depletion 3 d(1) 789 induced 2.17 0.104786687826736 0.227387112584017 592. Brown enviromental changes :Nitrogen Depletion 5 d(1) 790 induced 2.06 0.106094566840926 0.218554807692308 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 3.47 0.16077996639283 0.55790648338312 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 3.44 0.180583457804332 0.621207094846902 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 3.52 0.201245799103809 0.708385212845408 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 3.23 0.162784727408514 0.5257946695295 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 3.23 0.169409540702016 0.547192816467512 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 3.12 0.147910287528006 0.461480097087379 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 4.52 0.16516570201643 0.746548973114263 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 3.87 0.150572722180732 0.582716434839433 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced 0.06 0.105831310679612 0.00634987864077672 612. Brown enviromental changes :YPD stationary phase 4 h ypd-1(1) 803 induced 0.31 0.109485623599701 0.0339405433159073 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced 0 0.134172423450336 0 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 3.1 0.201236930545183 0.623834484690067 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 2.83 0.206847460791636 0.58537831404033 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 2.45 0.170540515309933 0.417824262509336 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 3.19 0.175359410007468 0.559396517923823 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 0 0.17158140403286 0 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 3.13 0.169087471994025 0.529243787341298 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 1.94 0.163346247199403 0.316891719566842 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 2.94 0.161180918595967 0.473871900672143 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 2.96 0.160383215085885 0.47473431665422 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced 0.14 0.128966112770724 0.0180552557879014 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.07 0.126029686333084 0.00882207804331588 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal 0.08 0.115678211351755 0.0092542569081404 628. Brown enviromental changes :DBY7286 + 0.3 mM H2O2 (20 min)(1) 819 induced 0.29 0.134181292008962 0.038912574682599 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced 0.67 0.131329817027633 0.0879909774085141 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced 1.06 0.140739357729649 0.149183719193428 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.33 0.116718166542196 0.0385169949589247 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced 0.94 0.13569501493652 0.127553314040329 636. Brown enviromental changes :ethanol car-1(1) 827 induced 1.42 0.156059092606423 0.221603911501121 638. Brown enviromental changes :glucose car-1(1) 829 repressed -1.6 0.160190907393577 0.256305451829723 639. Brown enviromental changes :mannose car-1(1) 830 repressed -0.64 0.12996359223301 0.0831766990291264 640. Brown enviromental changes :raffinose car-1(1) 831 repressed 0.82 0.104460884988798 -0.0856579256908144 641. Brown enviromental changes :sucrose car-1(1) 832 repressed -0.97 0.118637976101568 0.115078836818521 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.74 0.152207804331591 0.112633775205377 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -1.4 0.193176811053025 0.270447535474235 644. Brown enviromental changes :YP galactose vs reference pool car-2(1) 835 induced 0.38 0.113561893203883 0.0431535194174755 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed -1.47 0.178622572815534 0.262575182038835 646. Brown enviromental changes :YP mannose vs reference pool car-2(1) 837 repressed -0.49 0.145216112770724 0.0711558952576548 647. Brown enviromental changes :YP raffinose vs reference pool car-2(1) 838 induced 0.28 0.110477035100822 0.0309335698282302 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed -0.54 0.143410194174757 0.0774415048543688 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.27 0.105217979835698 0.0284088545556385 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed -0.71 0.123333644510829 0.0875668876026886 653. Brown enviromental changes :37 deg growth ct-1(1) 844 induced 0.11 0.0977767923823749 0.0107554471620612 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced -0.22 0.108533887229276 -0.0238774551904407 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced 0.21 0.104242905153099 0.0218910100821508 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0.03 0.135313200149365 0.00405939600448095 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 induced 0.07 0.106734036594473 0.00747138256161311 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 1.328 0.184913648244959 0.245565324869306 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 bimodal -0.824 0.185288928304705 -0.152678076923077 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 bimodal -1.828 0.217209204630321 -0.397058426064227 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 bimodal -0.903 0.174156553398058 -0.157263367718446 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 0.585 0.106840926064227 0.0625019417475728 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 induced 0.53 0.0955325802837939 0.0506322675504108 Rich Media 2% Glucose YPD-Average kss1 5mM aF, 30 min. 885 induced 0.71 0.0982458924570575 0.0697545836445108 trp- 2% Glucose-Average wt vs fus3 (+Fus3T180A,Y182F) + 5mM aF, 30 min. 913 induced 0.44 0.0972829536967886 0.042804499626587 Addition of 1M NaCl (10) 915 induced -2.59 0.116857729648992 -0.302661519790889 Addition of 1M NaCl (30) 916 induced -2.28 0.101541262135922 -0.231514077669902 Addition of 1M NaCl (90) 917 induced 0.03 0.168260828976848 0.00504782486930544 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -3.114 0.16688713592233 -0.519686541262136 DES460 + 0.02% MMS - 15 min 920 induced 0.569 0.0970407020164302 0.0552161594473488 DES460 + 0.02% MMS - 30 min 921 induced 0.276 0.106229462285288 0.0293193315907395 DES460 + 0.2% MMS - 45 min 922 induced 0.531 0.112936893203883 0.0599694902912619 DES460 + 0.02% MMS - 60 min 923 induced 0.567 0.0995472367438387 0.0564432832337565 DES460 + 0.02% MMS - 90 min 924 induced 0.776 0.116773711725168 0.0906164002987304 DES460 + 0.02% MMS - 120 min 925 induced 0.727 0.120476568334578 0.0875864651792382 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed -0.33 0.0977604555638536 0.0322609503360717 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.126 0.126317681105302 0.0159160278192681 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed -0.219 0.136783513816281 0.0299555895257655 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.175 0.118157206870799 0.0206775112023898 dun1- + 0.02% MMS - 120 min 935 repressed -0.05 0.099462285287528 0.0049731142643764 wt_plus_gamma_5_min 936 induced 0.926 0.162043502613891 0.150052283420463 wt_plus_gamma_10_min 937 induced 0.777 0.167996639283047 0.130533388722928 wt_plus_gamma_20_min 938 induced 0.09 0.1290678678118 0.011616108103062 wt_plus_gamma_30_min 939 bimodal 0.25 0.123103061986557 0.0307757654966393 wt_plus_gamma_45_min 940 induced 0.56 0.0994473487677371 0.0556905153099328 wt_plus_gamma_60_min 941 repressed 0.442 0.104740944734877 -0.0462954975728156 wt_plus_gamma_90_min 942 induced 0.667 0.101220593726662 0.0675141360156836 wt_plus_gamma_120_min 943 induced 0.773 0.100486370425691 0.0776759643390591 DES460 (wt) - mock irradiation - 5 min 944 induced 0.368 0.121729368932039 0.0447964077669904 mec1_plus_gamma_5_min 948 induced 0.574 0.154146284540702 0.0884799673263629 mec1_plus_gamma_10_min 949 induced 0.368 0.144399738610904 0.0531391038088127 mec1_plus_gamma_20_min 950 repressed -0.3 0.113415328603435 0.0340245985810305 mec1_plus_gamma_30_min 951 repressed -0.043 0.135559652725915 0.00582906506721434 mec1_plus_gamma_45_min 952 repressed -0.309 0.154826829723674 0.0478414903846153 mec1_plus_gamma_60_min 953 repressed 0.011 0.144015123226288 -0.00158416635548917 mec1_plus_gamma_90_min 954 repressed -0.124 0.124872572815534 0.0154841990291262 DES460 (wild type) + heat 20 min 960 induced 0.429 0.0997605489171023 0.0427972754854369 DES459 (mec1) + heat 20 min 961 induced 0.367 0.125794902912621 0.0461667293689319 MHY1 (dun1) + heat 20 min 962 induced 0.315 0.129467419716206 0.0407822372106049 DES460 + 0.02% MMS - 5 min 966 induced 0.136 0.115324869305452 0.0156841822255415 wt-gal 973 induced 0.721 0.120301064227035 0.0867370673076922 gal1+gal 975 induced 0.355 0.110985810306199 0.0393999626587006 gal3+gal 977 induced 0.023 0.177429518297237 0.00408087892083645 gal4+gal 978 induced 0.163 0.133616971620612 0.0217795663741598 gal7+gal 981 induced 0.738 0.185523244958925 0.136916154779687 gal10+gal 982 induced 0.216 0.178038181478715 0.0384562471994024 gal2-gal 985 induced 0.854 0.175980209111277 0.150287098581031 gal3-gal 986 induced 0.425 0.162784727408514 0.0691835091486184 gal4-gal 987 induced 0.535 0.181425970873786 0.0970628944174755 gal5-gal 988 induced -0.369 0.122696508588499 -0.0452750116691561 gal6-gal 989 induced 0.076 0.12695855115758 0.00964884988797608 gal7-gal 990 repressed -0.216 0.116799850634802 0.0252287677371172 gal10-gal 991 induced -0.007 0.197455657206871 -0.0013821896004481 gal1gal10+gal 993 induced 0.834 0.168499346527259 0.140528455003734 gal2gal80-gal 994 repressed 0.797 0.146019417475728 -0.116377475728155 gal4gal80-gal 995 repressed 0.784 0.0995173637042569 -0.0780216131441374 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced 0 0.114310586258402 0 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed 0 0.0979798356982823 0 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed 0 0.107684839432412 0 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0.07 0.152520537714712 0.0106764376400298 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0 0.129749346527259 0 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0 0.141292942494399 0 YAL038W 1010 induced 0.21314 0.135975541448842 0.0289818269044062 YBL020W 1013 induced 0.52797 0.168175410754294 0.0887915716159446 YBL040C 1014 induced 0.2618 0.132849141150112 0.0347799051530993 YBL084C 1015 induced 0.27605 0.117797330097087 0.0325179529733009 YBR002C 1016 induced 0.35709 0.106351288274832 0.0379769815300598 YBR088C 1018 induced 0.22645 0.148186146377894 0.0335567528472741 YBR142W 1019 induced 0.19883 0.0997246079163555 0.019828243792009 YBR143C 1020 induced 0.10254 0.122720313666916 0.0125837409634056 YBR192W 1022 induced 0.022341 0.112954163554892 0.00252350896797984 YBR196C 1024 induced -0.051227 0.0987686706497386 -0.00505962269137416 YCR013C 1028 induced 0.057863 0.111177184466019 0.00643304542475726 YDL031W 1031 induced -0.43638 0.107978435399552 -0.0471196296396565 YDL047W 1032 induced 0.012379 0.148822348767737 0.00184227185539582 YDL055C 1033 induced 0.26281 0.132468726661688 0.0348141060539582 YDL132W 1037 induced 0.020034 0.123236090365945 0.00246891183439134 YDR047W 1039 induced 0.32497 0.11726288274832 0.0381069190067216 YDR062W 1040 induced 0.10348 0.109919249439881 0.0113744439320389 YDR141C 1042 induced 0.15033 0.153505414488424 0.0230764689600448 YDR373W 1045 induced 0.047316 0.127605955937267 0.00603780341112773 YDR489W 1047 induced 0.15599 0.125005134428678 0.0194995509195295 YER172C 1050 induced 0.045083 0.10055498506348 0.00453332039161687 YFL005W 1051 induced 0.13845 0.122963498879761 0.0170242964199029 YFL024C 1052 induced 0.59377 0.141251867064974 0.0838711211071696 YGL116W 1055 induced 0.0068119 0.110888722927558 0.000755362891710232 YGR048W 1057 induced 0.28555 0.117640963405527 0.0335923771004482 YGR172C 1061 induced 0.25113 0.0982043502613891 0.0246620584811426 YGR175C 1062 induced 0.12687 0.106141710231516 0.0134661987770724 YHR090C 1068 induced 0.011466 0.101471247199403 0.00116346932038835 YHR118C 1069 induced 0.161 0.124072535474235 0.0199756782113518 YHR188C 1070 induced 0.47422 0.10425784167289 0.0494411536781179 YIR022W 1076 induced 0.1239 0.113205283793876 0.0140261346620612 YJL039C 1079 repressed -0.066415 0.104264376400299 0.00692471855862586 YJL081C 1082 induced 0.087368 0.147948095593727 0.0129259292158327 YJL091C 1083 induced 0.2572 0.131699962658701 0.0338732303958179 YJL194W 1084 induced 0.28917 0.112962098581031 0.0326652500466767 YKL052C 1089 induced 0.14429 0.111945948469007 0.016152680904593 YKR079C 1094 induced 0.076808 0.142942494398805 0.0109791271097834 YKR086W 1095 induced 0.26516 0.126041355489171 0.0334211258215086 YLL003W 1096 induced 0.16723 0.110863050784167 0.0185396279826362 YLR076C 1101 induced 0.13638 0.12787714712472 0.0174398853248693 YLR086W 1102 induced 0.2394 0.118530153099328 0.0283761186519791 YLR101C 1103 induced 0.023882 0.125819641523525 0.00300482467886482 YLR163C 1105 induced 0.0245 0.141986557132188 0.00347867064973861 YLR291C 1109 induced 0.34326 0.102686239731143 0.0352480786501121 YLR359W 1112 induced 0.22187 0.118833084391337 0.0263654964339059 YLR378C 1113 induced 0.18144 0.111671489917849 0.0202616751306945 YLR440C 1115 induced 0.061457 0.120039208364451 0.00737724962845407 YLR457C 1116 induced 0.08822 0.0974383868558626 0.0085960144884242 YLR459W 1117 induced 0.40331 0.141739637789395 0.0571650133168409 YML031W 1118 induced 0.18696 0.125184372666169 0.023404470313667 YML046W 1119 induced 0.12613 0.100034073935773 0.012617297745519 YMR001C 1121 induced -0.087905 0.12995145631068 -0.0114233827669903 YMR043W 1122 induced 0.14494 0.104355862584018 0.0151253387229276 YMR076C 1123 induced 0.31375 0.106937546676624 0.0335516552697908 YMR079W 1124 induced 0.17671 0.142921956684093 0.0252557389656461 YMR200W 1126 induced 0.14598 0.100489637789395 0.0146694773244959 YMR239C 1128 induced 0.065404 0.100877987303958 0.00659782388162807 YNL131W 1131 induced 0.072623 0.0976512322628827 0.00709172544062733 YNL150W 1132 induced -0.057149 0.1106357356236 -0.00632272165515312 YNL158W 1133 induced 0.54822 0.129782486930545 0.0711493549850634 YNL182C 1134 induced -0.044342 0.120546583271098 -0.00534527659540703 YNL272C 1136 induced 0.05761 0.12573282300224 0.00724346793315905 YNR035C 1138 induced 0.13785 0.148488610903659 0.0204691550130694 YNR043W 1139 induced 0.11963 0.110089152352502 0.0131699652959298 YNR053C 1140 induced -0.0018995 0.0975322068707991 -0.000185262426951083 YOR204W 1155 induced 0.45971 0.111939413741598 0.05145966789115 YOR232W 1157 induced 0.17227 0.111719566840926 0.0192459297796863 YOR236W 1158 induced 0.11943 0.114535100821509 0.0136789270911128 YOR261C 1160 induced 0.38858 0.101955750560119 0.039617965552651 YOR335C 1164 induced 0.084349 0.134305918595967 0.0113285699276512 YPL010W 1166 induced 0.2682 0.154772684839432 0.0415100340739357 YPL063W 1167 induced -0.044891 0.152473394324122 -0.00684468314460416 YPL076W 1168 induced 0.037276 0.0972507468259895 0.00362511883868558 YPL231W 1173 induced 0.16111 0.128863890963406 0.0207612614731143 YPL243W 1174 induced 0.27109 0.130205377147125 0.0352973756908141 YPR105C 1176 induced 0.020558 0.113267363704257 0.00232855046303212 YPR169W 1178 induced 0.25401 0.127034167289022 0.0322679488330845 YPR178W 1179 induced 0.14349 0.118338312173264 0.0169803644137417 YPR180W 1180 induced 0.00029034 0.12481002613891 0.0000362373429891711 YBR029C 1182 induced 0.20046 0.136311613144137 0.0273250259708737 YFR037C 1190 induced 0.33283 0.137237210604929 0.0456766608056385 YGL073W 1191 induced 0.22111 0.13169716206124 0.0291195595033608 YGL122C 1192 induced -0.0748 0.112759055265123 -0.0084343773338312 YGR198W 1196 induced 0.11287 0.145085418222554 0.0163757911547797 YHR205W 1201 induced 0.12176 0.116050224047797 0.0141302752800598 YJL097W 1202 induced 0.32368 0.160051811053025 0.0518055702016431 YKL033W 1204 induced 0.16827 0.123216952949963 0.0207337166728903 YKL082C 1205 induced 0.040761 0.100290328603435 0.00408793408420461 YKL210W 1206 induced 0.10858 0.0989395070948469 0.0107428516803585 YLR008C 1208 induced 0.23593 0.109629387602689 0.0258648614171024 YLR147C 1210 induced 0.045045 0.0981035287528006 0.0044190734526699 YLR229C 1211 induced 0.14041 0.140309932785661 0.0197009176624347 YMR235C 1212 induced 0.3677 0.110326736370426 0.0405671409634056 YNL149C 1213 induced 0.072948 0.113435399551904 0.00827488552651229 YNL222W 1214 induced 0.15058 0.102953696788648 0.0155027676624346 YNL245C 1215 induced 0.11866 0.103099327856609 0.0122337662434652 YNL258C 1216 induced 0.42285 0.128700522778193 0.0544210160567589 YOR077W 1220 induced 0.082881 0.117619025392084 0.00974838244352131 YPL075W 1221 induced 0.10696 0.131394697535474 0.0140539768483943 ADR1OE+ 1224 induced 0.0061805 0.108828883495146 0.00067261691444175 CAT8OE+ 1226 repressed 0.094908 0.101901138909634 -0.00967123329163554 CST6OE+ 1228 induced -0.0287435 0.110473300970874 -0.00317538932645632 ECM22OE+ 1230 induced -0.026971 0.119572442120986 -0.00322498833644511 GAT3OE+ 1231 induced -0.3518095 0.0980615197908887 -0.0344989742468727 GAT4OE+ 1232 induced -0.43397 0.176432505601195 -0.0765664144557506 GIS1OE+ 1234 induced -0.2395645 0.11350214712472 -0.02719108512486 GZF3OE+ 1236 induced 0.081001 0.104645257654966 0.0084763705153099 HAC1OE+ 1237 repressed -0.110211 0.112674570575056 0.0124179770976475 HAP4OE+ 1238 repressed 0.2759145 0.109436146377894 -0.0301950196097834 HMS1OE+ 1239 induced -0.3299045 0.0961440440627334 -0.031718352784494 MBP1OE+ 1242 induced -0.0296715 0.100155899925317 -0.00297177578463404 MGA1OE+ 1245 induced 0.061514 0.16113284167289 0.00991192562266616 MIG1OE+ 1246 induced 0.057733 0.111677091112771 0.00644745350121361 MOT3OE+ 1247 induced -0.165669 0.125487303958178 -0.0207893561594474 MSN2OE+ 1248 induced 0.043891 0.106702763256161 0.00468329098207616 RFX1OE+ 1253 induced -0.0144445 0.147090179238238 -0.00212464409400673 RME1OE+ 1255 repressed -0.09622 0.102954630321135 0.00990629452949961 ROX1OE+ 1256 induced 0.0466565 0.155175037341299 0.00723992412971432 RSC30OE+ 1257 repressed -0.078835 0.097708644510829 0.0077028609900112 SFP1OE+ 1258 repressed -0.2888035 0.109967326362957 0.0317589487392642 SIP4OE+ 1259 induced 0.008025 0.103866224794623 0.00083352645397685 SKN7OE+ 1260 induced 0.067026 0.131198655713219 0.00879372109783422 SOK2OE+ 1261 bimodal -0.2214645 0.142559746079164 -0.031571922885549 SPS18OE+ 1262 induced -0.0047205 0.0992695108289769 -0.000468601725868185 STP2OE+ 1265 induced -0.187906 0.109014656460045 -0.0204845080367812 SUT1OE+ 1267 repressed -0.117206 0.181843259895444 0.0213131211193054 SWI4OE+ 1268 induced 0.070817 0.139888442867812 0.00990647985856984 TOS8OE+ 1269 induced 0.0106595 0.125699682598954 0.00133989576666355 UPC2OE+ 1270 induced -0.177852 0.148957710978342 -0.0264924268129201 XBP1OE+ 1271 induced 0.00816 0.135332804331591 0.00110431568334578 YHP1OE+ 1273 induced -0.081395 0.158351848394324 -0.012889048700056 YOX1OE+ 1274 induced -0.084346 0.171867064973861 -0.0144962994622853 WT/cst6+ 1282 induced 0.1304575 0.110603995519044 0.0144291207454257 WT/mot3+ 1299 induced -0.005448 0.0982500933532487 -0.000535266508588499 WT/rgm1+ 1305 repressed NaN 0.106511855862584 0 WT/rox1+ 1307 induced 0.08875 0.11129574309186 0.00987749719940257 WT/sok2+ 1312 induced 0.1249005 0.112835138162808 0.0140931651741038 WT/zap1+ 1328 repressed -0.0920975 0.100197442120986 0.00922793392573751