Input Cluster (n=184) YAL001C TFC3 YAL002W VPS8 YAL018C YAL062W GDH3 YAR027W UIP3 YBL030C PET9 YBL097W BRN1 YBL098W BNA4 YBR057C MUM2 YBR118W TEF2 YBR203W YBR240C THI2 YBR249C ARO4 YBR275C RIF1 YCR004C YCP4 YCR026C YCR034W FEN1 YCR042C TAF2 YDL003W MCD1 YDL004W ATP16 YDL005C MED2 YDL007W RPT2 YDL028C MPS1 YDL046W YDL117W CYK3 YDL131W LYS21 YDL139C SCM3 YDL241W YDR023W SES1 YDR032C PST2 YDR040C ENA1 YDR075W PPH3 YDR132C YDR161W TCI1 YDR189W SLY1 YDR191W HST4 YDR240C SNU56 YDR247W YDR248C YDR253C MET32 YDR254W CHL4 YDR308C SRB7 YDR322W MRPL35 YDR367W YDR382W RPP2B YDR414C ERD1 YDR419W RAD30 YDR427W RPN9 YDR464W SPP41 YDR524C AGE1 YEL009C GCN4 YEL023C YEL027W CUP5 YEL073C YER026C CHO1 YER037W PHM8 YER045C ACA1 YER138W-A YFR001W LOC1 YFR011C YFR012W YGL001C ERG26 YGL036W YGL037C PNC1 YGL105W ARC1 YGL145W TIP20 YGL146C YGL184C STR3 YGL224C SDT1 YGL263W COS12 YGR004W YGR052W YGR059W SPR3 YGR074W SMD1 YGR111W YGR138C TPO2 YGR163W GTR2 YGR218W CRM1 YGR253C PUP2 YGR273C YGR285C ZUO1 YHL022C SPO11 YHR001W OSH7 YHR052W CIC1 YHR079C IRE1 YHR085W IPI1 YHR143W-A RPC10 YHR216W IMD2 YIL045W PIG2 YIL060W YIL061C SNP1 YIL106W MOB1 YIL107C PFK26 YIR007W YJL039C NUP192 YJR001W YJR010W MET3 YJR055W HIT1 YJR076C CDC11 YJR094C IME1 YKL014C YKL058W TOA2 YKL059C MPE1 YKL061W YKL072W STB6 YKL109W HAP4 YKL149C DBR1 YKL152C GPM1 YKL166C TPK3 YKL182W FAS1 YKL188C PXA2 YKL208W CBT1 YKR014C YPT52 YKR089C YKR090W PXL1 YLL012W YLL015W BPT1 YLL042C APG10 YLR012C YLR018C POM34 YLR049C YLR061W RPL22A YLR083C EMP70 YLR135W SLX4 YLR191W PEX13 YLR238W YLR272C YCS4 YLR354C TAL1 YLR361C DCR2 YLR404W YLR411W CTR3 YML035C AMD1 YML066C SMA2 YML085C TUB1 YML092C PRE8 YML118W NGL3 YML125C YMR023C MSS1 YMR024W MRPL3 YMR098C YMR132C YMR133W REC114 YMR204C YMR308C PSE1 YNL014W HEF3 YNL064C YDJ1 YNL231C PDR16 YNL308C KRI1 YNR016C ACC1 YOL023W IFM1 YOL041C NOP12 YOL048C YOL088C MPD2 YOL104C NDJ1 YOL115W TRF4 YOL122C SMF1 YOL123W HRP1 YOL132W GAS4 YOR001W RRP6 YOR012W YOR018W ROD1 YOR114W YOR128C ADE2 YOR177C MPC54 YOR193W YOR233W KIN4 YPL016W SWI1 YPL054W LEE1 YPL088W YPL110C YPL125W KAP120 YPL128C TBF1 YPL140C MKK2 YPL178W CBC2 YPL203W TPK2 YPL218W SAR1 YPR001W CIT3 YPR007C SPO69 YPR035W GLN1 YPR036W VMA13 YPR066W UBA3 YPR078C YPR155C NCA2 YPR171W Genes Not Found: YBR012W-A YBR012W-B YCL019W YCL020W YER138C YER160C YFL002W-A YJL113W YJL114W YJR028W YJR029W YML039W YML040W YML045W YMR050C YMR051C MIPS Functional Classification Category p-value In Category from Cluster k f endoplasmic reticulum 0.00212553 RPT2 ENA1 ERD1 RPN9 CHO1 TIP20 PUP2 IRE1 PRE8 YDJ1 ACC1 MPD2 12 157 meiosis 0.00331988 MUM2 MPS1 PUP2 SPO11 IME1 REC114 NDJ1 MPC54 SPO69 9 104 MIPS Phenotypes Category p-value In Category from Cluster k f MIPS Subcellular Localization Category p-value In Category from Cluster k f nucleus 0.000981545 TFC3 THI2 RIF1 TAF2 MCD1 MED2 RPT2 LYS21 SNU56 CHL4 SRB7 RPN9 GCN4 ACA1 SMD1 CRM1 PUP2 ZUO1 SPO11 RPC10 SNP1 NUP192 IME1 TOA2 HAP4 DBR1 POM34 YCS4 PRE8 REC114 PSE1 ACC1 NDJ1 TRF4 HRP1 SWI1 KAP120 TBF1 CBC2 SPO69 40 836 nuclear envelope 0.00185445 RPT2 RPN9 PUP2 PRE8 PSE1 ACC1 6 45 ER membrane 0.00233002 RPT2 ENA1 ERD1 RPN9 CHO1 TIP20 PUP2 IRE1 PRE8 ACC1 10 118 MIPS Protein Complexes Category p-value In Category from Cluster k f cAMP-dependent protein kinase 0.0049477 TPK3 TPK2 2 4 MIPS Protein Classes Category p-value In Category from Cluster k f PKA family (cAMP dependent) 0.00252259 TPK3 TPK2 2 3 GO Molecular Function Category p-value In Category from Cluster k f cAMP-dependent protein kinase [GO:0004691] 0.00252259 TPK3 TPK2 2 3 cyclic-nucleotide dependent protein kinase [GO:0004690] 0.00252259 TPK3 TPK2 2 3 structural constituent of nuclear pore [GO:0017056] 0.0049477 NUP192 KAP120 2 4 GO Biological Process Category p-value In Category from Cluster k f mitotic chromosome condensation [GO:0007076] 8.07503e-05 BRN1 MCD1 YCS4 TRF4 4 9 mitotic prophase [GO:0000088] 8.07503e-05 BRN1 MCD1 YCS4 TRF4 4 9 chromosome condensation [GO:0030261] 0.000451994 BRN1 MCD1 YCS4 TRF4 SPO69 5 23 fatty acid biosynthesis [GO:0006633] 0.00183549 FEN1 FAS1 ACC1 3 9 GO Cellular Component Category p-value In Category from Cluster k f mitotic chromosome [GO:0005708] 0.000417735 BRN1 MCD1 YCS4 SPO69 4 13 commitment complex [GO:0000243] 0.000571488 SNU56 SMD1 SNP1 CBC2 4 14 chromosome [GO:0005694] 0.00233002 BRN1 RIF1 MCD1 MPS1 CHL4 SPO11 YCS4 NDJ1 TBF1 SPO69 10 118 cAMP-dependent protein kinase complex [GO:0005952] 0.00252259 TPK3 TPK2 2 3 SMART Domains Category p-value In Category from Cluster k f PFam-A Domains Category p-value In Category from Cluster k f Yeast Two Hybrid - Uetz Category p-value In Category from Cluster k f Yeast Two Hybrid - Ito (core) Category p-value In Category from Cluster k f Yeast Two Hybrid - Ito (full) Category p-value In Category from Cluster k f YGR092W (DBF2) 0.00252259 MOB1 YKL061W 2 3 Synthetic Genetic Array Analysis Category p-value In Category from Cluster k f MDS Proteomics Complexes Category p-value In Category from Cluster k f Cellzome Complexes Category p-value In Category from Cluster k f YBR119W (MUD1) 0.00183549 SNU56 SNP1 CBC2 3 9 YPL203W (TPK2) 0.00252259 TPK3 TPK2 2 3 YBR057C (MUM2) 0.00252259 MUM2 YGL036W 2 3 Proteome Localization--Observed Category p-value In Category from Cluster k f Proteome Localization--Predicted+Observed Category p-value In Category from Cluster k f Deletions Consortium (Essentiality, Morphology) Category p-value In Category from Cluster k f Yeast Fitness Data Category p-value In Category from Cluster k f Published Complexes Category p-value In Category from Cluster k f