Oaf1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced 0.13 0.107314693801344 0.0139509101941747 0.00629105908763472 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed 0.37 0.0955815907393577 -0.0353651885735623 6. Expression during the cell cycle (cdc15 arrest and release)(14) 37 repressed 0.19 0.105213778939507 -0.0199906179985063 7. Expression during the cell Cycle (cdc28)(10) 57 induced 0.09 0.1217321695295 0.010955895257655 7. Expression during the cell Cycle (cdc28)(16) 63 induced 0.03 0.0979826362957431 0.00293947908887229 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced -0.15 0.105714152352502 -0.0158571228528753 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed -0.1 0.118065253920836 0.0118065253920836 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed -0.27 0.103148338312173 0.0278500513442867 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.15 0.131611743838686 0.0197417615758029 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -1.24 0.104087938760269 -0.129069044062734 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced -0.1 0.117731516056759 -0.0117731516056759 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced 0.105 0.111951082897685 0.0117548637042569 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -0.251 0.0983709858103062 0.0246911174383869 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 repressed 0.044 0.106766710231516 -0.0046977352501867 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed 0.168 0.102366971620612 -0.0171976512322628 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.184 0.102710978342046 -0.0188988200149365 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.105 0.136833924570575 -0.0143675620799104 12. Expression in tup1-deleted cells(1) 96 induced -0.089 0.179111743838686 -0.0159409452016431 17. parental strain versus evolved strain 2(1) 101 induced 0.07 0.115436893203883 0.00808058252427181 18. parental strain versus evolved strain 3(1) 102 induced 0.01 0.133627707244212 0.00133627707244212 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.11206217326363 0 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.113626306945482 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.130498039581777 0 28. Young: Expression in srb4 mutant(1) 112 repressed 0 0.121620145631068 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.134407206870799 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.0996536594473488 0 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.133632374906647 0 34. Young: Expression in taf17 mutant(1) 118 repressed 0 0.0983523151605676 0 35. Young: Expression in tfa1 mutant(1) 119 repressed -0.293 0.117277819268111 0.0343624010455565 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.104122012696042 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced -0.684 0.10278286034354 -0.0703034764749814 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.114737210604929 0 45. Expression in snf2 mutant cells in minimal medium(1) 135 repressed 0.19 0.10021144510829 -0.0190401745705751 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed -0.263 0.111122572815534 0.0292252366504854 56. Expression in response to overproduction of Ste12p(1) 161 repressed -0.102 0.126435772964899 0.0128964488424197 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.018 0.102285287528006 0.00184113517550411 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed 0.013 0.106722367438387 -0.00138739077669903 65. Expression in ste4 deletion mutant cells(1) 170 induced 0.022 0.097540141896938 0.00214588312173264 73. Expression in response to overproduction of activated Pkc1p(1) 178 bimodal 0.188 0.0982771657953697 0.0184761071695295 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed -0.047 0.101439507094847 0.00476765683345781 79. Expression in fus3 deletion mutant cells(1) 185 induced 0.044 0.0994767550410754 0.00437697722180732 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.034 0.0993577296489918 0.00337816280806572 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.036 0.103454070201643 0.00372434652725915 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.019 0.0964441747572816 0.00183243932038835 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced 0.017 0.114154686333084 0.00194062966766243 88. Expression in response to DNA damage by MMS(1) 194 repressed 0 0.105666075429425 0 94. Expression in response to 1ug/mL FK506(1) 200 induced -0.094 0.101956684092606 -0.00958392830470496 95. Expression in response to 50ug/mL FK506(1) 201 induced 0.01 0.10579070201643 0.0010579070201643 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.119038461538462 0 101. Young: Expression in spt3 deletion mutant(1) 207 repressed 0 0.127649365197909 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 repressed 0 0.0981151979088872 0 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.0956352688573562 0 105. Young: Expression in taf90 deletion mutant(1) 211 repressed 0 0.0998627707244212 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced -0.2 0.113081123973114 -0.0226162247946228 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced 0.209 0.131836258401792 0.0275537780059745 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.206 0.147756254667662 0.0304377884615384 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.083 0.12683859223301 0.0105276031553398 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 induced 0.01 0.0999010455563854 0.000999010455563854 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal 0.04 0.120320668409261 0.00481282673637044 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced -0.106 0.138664581777446 -0.0146984456684093 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed 0.02 0.0989087005227782 -0.00197817401045556 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 induced 0.013 0.100817307692308 0.001310625 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.063 0.104174757281553 0.00656300970873784 162. Rosetta 2000: Expression in erg3 (haploid) deletion mutant (1) 281 induced 0.043 0.104625186706497 0.00449888302837937 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced -0.013 0.0978197348767737 -0.00127165655339806 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced 0.146 0.0994767550410754 0.014523606235997 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced -0.007 0.0970631067961165 -0.000679441747572816 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced 0.036 0.116215926064227 0.00418377333831217 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 0.046 0.11155573188947 0.00513156366691562 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced 0.057 0.108242625093353 0.00616982963032112 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced -0.103 0.104500560119492 -0.0107635576923077 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced -0.153 0.103730862584018 -0.0158708219753548 198. Rosetta 2000: Expression in jnm1 deletion mutant (1) 317 induced -0.02 0.100870985810306 -0.00201741971620612 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced 0.01 0.130802371172517 0.00130802371172517 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed 0.176 0.106245332337565 -0.0186991784914114 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced -0.05 0.0995257654966393 -0.00497628827483197 223. Rosetta 2000: Expression in pet127 deletion mutant (1) 342 induced 0.03 0.10608429798357 0.0031825289395071 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 repressed 0.033 0.100613797610157 -0.00332025532113518 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.199 0.103537621359223 -0.0206039866504854 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.189 0.104844100074683 0.0198155349141151 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced -0.086 0.0994240104555639 -0.00855046489917849 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.04 0.147654032860344 -0.00590616131441376 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced 0.103 0.101790048543689 0.010484375 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed -0.116 0.100418689320388 0.011648567961165 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0.967 0.154101474981329 0.149016126306945 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.06 0.102285287528006 0.00613711725168036 280. Rosetta 2000: Expression in ste4 (haploid) deletion mutant (1) 399 induced 0.073 0.097540141896938 0.00712043035847647 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced -0.07 0.131449775952203 -0.00920148431665421 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.299 0.0990099887976102 0.0296039866504854 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.153 0.198457337565347 0.0303639726474981 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.123 0.104142083644511 0.0128094762882749 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced -0.07 0.14869072068708 -0.0104083504480956 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced 0.057 0.132449589245706 0.00754962658700524 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.136 0.0958705190440627 0.0130383905899925 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced 0.289 0.115726288274832 0.0334448973114264 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced -0.11 0.102114451082898 -0.0112325896191188 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced 0.096 0.0979121545929798 0.00939956684092606 341. Rosetta 2000: Expression in yhr039c deletion mutant (1) 460 induced 0.08 0.111018950709485 0.0088815160567588 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced 0.166 0.129937453323376 0.0215696172516804 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced 0.003 0.119937453323376 0.000359812359970128 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.103 0.116869865571322 0.0120375961538462 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 induced 0.349 0.117953696788648 0.0411658401792382 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced -0.046 0.10503500746826 -0.00483161034353996 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.269 0.109071601941748 0.0293402609223302 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0.113 0.126642083644511 0.0143105554518297 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.213 0.111101101568335 -0.0236645346340554 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 0.076 0.112229742345034 0.00852946041822258 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.219 0.123521751306945 0.027051263536221 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced -0.073 0.110575522778193 -0.00807201316280809 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced -0.04 0.113164208364451 -0.00452656833457804 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0.19 0.108126867064974 -0.0205441047423451 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 repressed -0.29 0.0976096900672143 0.0283068101194921 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 repressed -0.12 0.0995136295743092 0.0119416355489171 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.02 0.100255787901419 0.00200511575802838 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(7) 546 induced 0.25 0.0973347647498133 0.0243336911874533 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced -0.26 0.100418222554145 -0.0261087378640777 Expression in PDR1-3 mutant(1) 555 repressed 0.379 0.115041542195668 -0.0436007444921582 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.444 0.0975088685586258 0.0432939376400299 PHO81c vs WT exp2(1) 584 induced -0.029 0.115163834951456 -0.00333975121359222 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 0.077 0.147378640776699 0.0113481553398058 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.809 0.133318241224795 -0.107854457150859 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced 0.259 0.137184466019417 0.035530776699029 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0.396 0.132730115758028 0.0525611258401791 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 repressed 0.092 0.106715365944735 -0.00981781366691562 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced 0.164 0.0963638909634055 0.0158036781179985 457. Expression of G1 arrested cells (with alpha factor) in response to 0.1% MMS for 60 min(1) 614 repressed 0 0.102315160567588 0 458. Expression of S arrested cells (with hydroxyurea) in response to 0.1% MMS for 60 min(1) 615 repressed 0 0.121659353995519 0 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed 0 0.119673730395818 0 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed 0.07 0.11008075056012 -0.0077056525392084 463. Expression in response to 0.1% MMS for 60 min(1) 620 repressed 0.07 0.10567354368932 -0.0073971480582524 464. Expression in response to 0.2% MMS for 60 min(1) 621 repressed 0.111 0.0957216206123973 -0.0106250998879761 469. Expression in hda1 deletion(1) 626 induced -0.139 0.16465926064227 -0.0228876372292755 470. Expression in hda1 deletion(1) 627 induced -0.022 0.127411314413742 -0.00280304891710232 472. Expression in sap3 deletion(1) 629 induced -0.939 0.102816000746826 -0.0965442247012696 474. Expression in hda1 deletion(1) 631 induced -0.283 0.0975462098581031 -0.0276055773898432 475. Expression in hos2 deletion(1) 632 induced -0.53 0.100713685586258 -0.0533782533607167 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(1) 634 induced -0.01 0.0989129014189694 -0.000989129014189694 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced 0.003 0.110993278566094 0.000332979835698282 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced -0.435 0.116780246452577 -0.050799407206871 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced 1.059 0.11392783793876 0.120649580377147 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 repressed -1.412 0.10729929051531 0.151506598207618 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed -1.038 0.104760548917102 0.108741449775952 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(5) 651 repressed 0 0.0991126773711725 0 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0.011 0.106808719193428 0.00117489591112771 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0 0.0994711538461538 0 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced 0.412 0.103465272591486 0.0426276923076922 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 bimodal 0.772 0.10375 0.080095 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced -1.127 0.112538741598208 -0.12683116178118 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0 0.142127053771471 0 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -0.14 0.104678864824496 -0.0146550410754294 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced -0.27 0.124663928304705 -0.0336592606422704 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0.31 0.105342606422704 0.0326562079910382 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced 0.18 0.107483196415235 0.0193469753547423 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.02 0.12445575056012 0.0024891150112024 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.52 0.11991784914115 0.062357281553398 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.33 0.11351568334578 0.0374601755041074 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.29 0.0997092046303211 0.0289156693427931 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced -0.09 0.116348487677371 -0.0104713638909634 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced -0.29 0.115716486183719 -0.0335577809932785 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 0.21 0.124176624346527 0.0260770911127707 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced -0.04 0.112672703510082 -0.00450690814040328 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced -0.32 0.101048356982823 -0.0323354742345034 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced -3.25 0.116109036594473 -0.377354368932037 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced 0.63 0.106172050037341 0.0668883915235248 515. Brown enviromental changes :29C to 33C - 30 minutes(1) 713 repressed 0.53 0.104547703510082 -0.0554102828603435 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 1.12 0.126124906646751 0.141259895444361 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed 0.05 0.106626213592233 -0.00533131067961165 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed -0.03 0.112704910380881 0.00338114731142643 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced 0.05 0.0974495892457058 0.00487247946228529 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced -0.27 0.115888256161314 -0.0312898291635548 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced -0.19 0.108427464525766 -0.0206012182598955 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced -0.23 0.110710418222554 -0.0254633961911874 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced -0.62 0.11357216206124 -0.0704147404779688 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.05 0.14757141523525 0.0073785707617625 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.4 0.120998879761016 -0.0483995519044064 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced -0.26 0.125 -0.0325 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 induced 0.22 0.109138816280807 0.0240105395817775 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced 0.05 0.103021844660194 0.0051510922330097 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 induced -0.12 0.097836071695295 -0.0117403286034354 538. Brown enviromental changes :1 mM Menadione (80 min) redo(1) 736 induced 0.16 0.101644417475728 0.0162631067961165 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 induced -0.34 0.108567027632562 -0.0369127893950711 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 0.63 0.0977063106796116 0.0615549757281553 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -0.53 0.103664115011202 0.0549419809559371 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed -0.22 0.105784634055265 0.0232726194921583 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -0.28 0.113159073935773 -0.0316845407020164 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.04 0.147345500373413 -0.00589382001493652 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced 0.01 0.14701643017177 0.0014701643017177 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced 0.09 0.133481609410007 0.0120133448469006 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced -0.01 0.110018203883495 -0.00110018203883495 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced -0.11 0.120301530993279 -0.0132331684092607 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced 0.01 0.099589712471994 0.00099589712471994 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.29 0.0975816840926064 -0.0282986883868559 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.07 0.106494118745332 0.00745458831217324 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced -0.03 0.0953085324869305 -0.00285925597460792 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced -0.13 0.123825616131441 -0.0160973300970873 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.19 0.104592513069455 -0.0198725774831965 581. Brown enviromental changes :aa starv 4 h(1) 779 induced -1.4 0.103895631067961 -0.145453883495145 582. Brown enviromental changes :aa starv 6 h(1) 780 induced -0.59 0.110973674383869 -0.0654744678864827 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed -0.33 0.133322908887229 0.0439965599327856 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.36 0.105097087378641 0.0378349514563108 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 bimodal 0.09 0.107076176250934 0.00963685586258406 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.45 0.117431385362211 0.052844123412995 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 0.41 0.147939227035101 0.0606550830843914 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced -0.14 0.16777212471994 -0.0234880974607916 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced -0.08 0.130232916355489 -0.0104186333084391 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 0.41 0.138945108289768 0.0569674943988049 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 0.3 0.118443334578043 0.0355330003734129 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 0.59 0.144407673637043 0.0852005274458554 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced -1.09 0.133180078416729 -0.145166285474235 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced 0.27 0.0986949215832711 0.0266476288274832 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.17 0.15273711725168 0.0259653099327856 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.25 0.147748786407767 0.0369371966019418 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.23 0.128448935772965 0.029543255227782 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 bimodal 0.44 0.14798356982823 0.0651127707244212 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 0.83 0.142682505601195 0.118426479648992 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 0.41 0.129571508588499 0.0531243185212846 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 1.56 0.121207057505601 0.189083009708738 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 0.4 0.115311799850635 0.046124719940254 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 0.58 0.119459017923824 0.0692862303958179 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal -0.14 0.103636575802838 -0.0145091206123973 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.16 0.136564600448096 0.0218503360716954 638. Brown enviromental changes :glucose car-1(1) 829 repressed -0.68 0.111816654219567 0.0760353248693056 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.06 0.109346060492905 0.0065607636295743 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed 0.17 0.144438013442868 -0.0245544622852876 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.51 0.14375140029873 -0.0733132141523523 646. Brown enviromental changes :YP mannose vs reference pool car-2(1) 837 repressed 0.32 0.119417942494399 -0.0382137415982077 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed -0.08 0.122801997759522 0.00982415982076176 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.84 0.102436053024645 0.0860462845407018 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed -1.92 0.0989619118745332 0.190006870799104 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0.01 0.105320668409261 0.00105320668409261 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 induced 0.239 0.103888162808066 0.0248292709111278 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.74 0.160488237490665 0.118761295743092 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 repressed 0.057 0.13791215459298 -0.00786099281179986 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 bimodal -0.299 0.165053678117999 -0.0493510497572817 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed -0.526 0.121378827483196 0.0638452632561611 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 0.263 0.0979676997759522 0.0257655050410754 Addition of 1M NaCl (10) 915 induced -2.88 0.101018017176998 -0.290931889469754 Addition of 1M NaCl (90) 917 bimodal 0.48 0.134893110530246 0.0647486930545181 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -1.329 0.12021284540702 -0.15976287154593 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed -0.35 0.12152072442121 0.0425322535474235 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.31 0.144548170276326 0.0448099327856611 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed -0.31 0.16060212845407 0.0497866598207617 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.33 0.129666728902166 0.0427900205377148 DES459 (mec1-) + 0.02% MMS - 120 min 932 repressed -0.24 0.105607262882748 0.0253457430918595 dun1- + 0.02% MMs - 30 min 933 repressed -0.17 0.11537714712472 0.0196141150112024 dun1- + 0.02% MMS - 90 min 934 repressed -0.737 0.108282300224048 0.0798040552651234 dun1- + 0.02% MMS - 120 min 935 repressed -0.453 0.111351288274832 0.0504421335884989 wt_plus_gamma_5_min 936 induced 0.34 0.121170182972367 0.0411978622106048 wt_plus_gamma_10_min 937 induced 0.49 0.138186146377894 0.0677112117251681 wt_plus_gamma_20_min 938 induced 0.57 0.109713405526512 0.0625366411501118 DES460 (wt) - mock irradiation - 5 min 944 induced 0.4 0.123176344286781 0.0492705377147124 mec1_plus_gamma_5_min 948 induced 0.27 0.104982729648992 0.0283453370052278 mec1_plus_gamma_30_min 951 repressed 0.11 0.100368745332338 -0.0110405619865572 mec1_plus_gamma_45_min 952 repressed 1.72 0.116821321882001 -0.200932673637042 mec1_plus_gamma_60_min 953 repressed 0.53 0.124091672890217 -0.065768586631815 wt-gal 973 induced -0.239 0.120280526512323 -0.0287470458364452 wt+gal 974 repressed -0.096 0.103637509335325 0.0099492008961912 gal1+gal 975 repressed -0.229 0.105891056758775 0.0242490519977595 gal3+gal 977 bimodal 0.339 0.163718726661688 0.0555006483383122 gal4+gal 978 induced 0.103 0.129775952203137 0.0133669230769231 gal7+gal 981 induced -0.721 0.175365477968633 -0.126438509615384 gal10+gal 982 induced 0.312 0.162115384615385 0.0505800000000001 gal2-gal 985 induced -0.003 0.162926624346527 -0.000488779873039581 gal3-gal 986 induced -0.336 0.123515216579537 -0.0415011127707244 gal4-gal 987 induced 0.113 0.172473861090366 0.0194895463032114 gal5-gal 988 induced 0.149 0.11868932038835 0.0176847087378641 gal6-gal 989 induced -0.08 0.109050597460792 -0.00872404779686336 gal7-gal 990 bimodal 0.116 0.114574775952203 0.0132906740104555 gal10-gal 991 induced 0.644 0.1601643017177 0.103145810306199 gal80-gal 992 repressed -0.399 0.113571695294996 0.0453151064227034 gal1gal10+gal 993 induced -0.458 0.146762042569081 -0.0672170154966391 BY4741 GAL t=30min vs. t=0 (YT00261) 996 repressed 0 0.10663928304705 0 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced 0 0.126256067961165 0 BY4741 GAL t=90min vs. t=0 (YT00262) 998 repressed 0 0.102025298730396 0 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed 0 0.108062920089619 0 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed 0.03 0.114333457804332 -0.00343000373412996 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0.04 0.158224421209858 0.00632897684839432 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0.04 0.100336071695295 -0.0040134428678118 sfp1::GALSFP1 t=90min GAL vs. t=0 RAFF (YT00266) 1007 induced 0.07 0.109168689320388 0.00764180825242716 YAL038W 1010 induced 0.087816 0.100327203136669 0.00881033367064973 YBL020W 1013 induced 0.19741 0.129639656460045 0.0255921645817775 YBL040C 1014 induced 0.2133 0.0961977221807319 0.0205189741411501 YBL084C 1015 induced -0.074269 0.0968955377147125 -0.00719633469053398 YBR088C 1018 induced -0.054806 0.108968913368185 -0.00597215026605675 YBR142W 1019 induced 0.015927 0.100397218073189 0.00159902649225168 YBR143C 1020 induced 0.16295 0.103771938013443 0.0169096372992905 YCR042C 1029 induced 0.040599 0.0969884241971621 0.00393763303398058 YDL047W 1032 induced 0.083714 0.103787341299477 0.00868845348954442 YDL055C 1033 induced 0.23938 0.122193334578043 0.0292506404312919 YDL132W 1037 induced 0.062736 0.105535847647498 0.00662089693801343 YDR047W 1039 induced 0.088902 0.0972838872292756 0.00864873214245706 YDR141C 1042 induced 0.13813 0.131018483943241 0.0180975831870799 YDR373W 1045 induced -0.023219 0.0979527632561613 -0.00227436521004481 YDR489W 1047 induced -0.055776 0.110146097834205 -0.00614350875280062 YFL005W 1051 induced 0.14731 0.0971559932785661 0.0143120493698656 YGR048W 1057 induced 0.22234 0.104887976101568 0.0233207926064226 YGR175C 1062 induced 0.17338 0.107233009708738 0.018592059223301 YIR022W 1076 induced 0.17712 0.0968810679611651 0.0171595747572816 YJL081C 1082 induced 0.054741 0.0990403286034354 0.00542156662808066 YJL091C 1083 induced 0.091914 0.11931572068708 0.0109667851512323 YKL052C 1089 induced 0.18038 0.0973230955937267 0.0175551399831964 YKR079C 1094 induced 0.073534 0.111558065720687 0.008203310804705 YKR086W 1095 induced 0.11348 0.105500840179238 0.0119722353435399 YLR076C 1101 induced 0.092447 0.100828043315907 0.00932125012042566 YLR101C 1103 induced 0.14454 0.107029032860344 0.0154699764096341 YLR163C 1105 induced 0.15776 0.116776045556385 0.0184225889469753 YLR291C 1109 induced 0.24967 0.105585791635549 0.0263616045976475 YLR359W 1112 induced 0.046923 0.103583364451083 0.00486044221013817 YLR378C 1113 induced 0.283 0.10571928678118 0.0299185581590739 YLR459W 1117 induced 0.19143 0.132791262135922 0.0254202313106795 YMR079W 1124 induced 0.26745 0.118581497386109 0.0317146214759149 YNL158W 1133 induced 0.323 0.110037341299477 0.0355420612397311 YNL182C 1134 induced 0.14888 0.109950522778193 0.0163694338312174 YNL272C 1136 induced 0.071404 0.114597647498133 0.00818273042195669 YNR035C 1138 induced 0.25237 0.106151512322629 0.0267894571648619 YNR053C 1140 induced 0.14181 0.100024738610904 0.0141845081824123 YOR204W 1155 induced 0.062304 0.101970220313667 0.00635315260642271 YOR335C 1164 induced 0.13972 0.0975373412994772 0.013627917326363 YPL010W 1166 induced 0.25773 0.120332337565347 0.0310132533607169 YPL063W 1167 induced 0.12839 0.116445108289768 0.0149503874533233 YPL243W 1174 induced 0.1438 0.10100214712472 0.0145241087565347 YPR105C 1176 induced 0.28894 0.102763256161314 0.0296924152352501 YPR169W 1178 induced 0.24066 0.109630321135176 0.0263836330843915 YPR178W 1179 induced 0.17756 0.095302931292009 0.0169219884802091 YPR180W 1180 induced 0.070347 0.103874159820762 0.00730723552091114 YBR029C 1182 induced 0.22197 0.128460604929052 0.0285144004761017 YFR037C 1190 induced 0.10266 0.105608663181479 0.0108417853622106 YGL073W 1191 induced 0.021363 0.0974673263629574 0.00208219449309186 YGR198W 1196 induced 0.074697 0.123786874533234 0.00924650816700898 YJL097W 1202 induced 0.19773 0.141739637789395 0.0280261785800971 YLR229C 1211 induced -0.021122 0.106262602688574 -0.00224447869398806 ECM22OE+ 1230 induced 0.1452835 0.113950242718447 0.0165550900879855 GAT3OE+ 1231 induced 0.3074155 0.103602501867065 0.0318490149127147 GAT4OE+ 1232 induced 0.1431985 0.156488050784167 0.0224088541402165 GIS1OE+ 1234 induced 0.1013865 0.103628174010456 0.0105064978643111 GZF3OE+ 1236 induced 0.026165 0.10488144137416 0.0027442229135549 HAC1OE+ 1237 repressed 0.122599 0.112212005227782 -0.0137570796289208 MGA1OE+ 1245 induced -0.0267505 0.116546863330844 -0.00311768686753174 MOT3OE+ 1247 induced 0.0812635 0.122286221060493 0.00993740632514937 RFX1OE+ 1253 induced 0.0346075 0.133195948469007 0.00460957878664116 RME1OE+ 1255 bimodal 0.053456 0.112707710978342 0.00602490339805825 ROX1OE+ 1256 induced 0.225414 0.142611557132188 0.032146641539395 SKN7OE+ 1260 induced 0.0538545 0.110782766990291 0.00596615052487863 SOK2OE+ 1261 induced -0.0137455 0.117891616878267 -0.00162047921980022 STP2OE+ 1265 induced 0.1121515 0.099785287528006 0.0111910696741972 SUT1OE+ 1267 repressed -0.054599 0.142853808812547 0.00779967510735625 SWI4OE+ 1268 induced 0.0101495 0.10710931665422 0.00108710600938201 TOS8OE+ 1269 induced -0.0839845 0.121597740851382 -0.0102123254665329 UPC2OE+ 1270 induced -0.0272865 0.148909634055265 -0.00406322272964899 XBP1OE+ 1271 induced 0.1037 0.106276605675878 0.0110208840085885 YHP1OE+ 1273 induced 0.030181 0.125462098581031 0.0037865715972741 YOX1OE+ 1274 induced -0.08116 0.14710931665422 -0.0119393921396565 WT/rgm1+ 1305 repressed 0.0499675 0.0991117438386856 -0.00495236606025952