Pbf1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 repressed -2.595 0.348180418 0.903528185 0.157235683 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 repressed -1.717 0.344939332 0.592260833 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 repressed -3.32 0.339586989 1.127428803 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 repressed -2.501 0.339549188 0.849212519 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 repressed -0.97 0.339286448 0.329107854 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 repressed -2.905 0.338645697 0.98376575 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 repressed -2.94 0.330560482 0.971847816 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 repressed -3.18 0.329415718 1.047541982 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 repressed -2.396 0.3275 0.78469 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 repressed -2.048 0.325448479 0.666518484 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 repressed -1.191 0.317866343 0.378578815 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 repressed -2.156 0.313366156 0.675617433 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 repressed -1.06 0.312693205 0.331454797 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 repressed -1.74 0.312607336 0.543936765 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 repressed -3.64 0.311676778 1.134503472 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 repressed -4.32 0.305812955 1.321111966 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 repressed -2.94 0.303029681 0.890907262 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 repressed -2.32 0.301873717 0.700347023 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 repressed -3.06 0.301272634 0.92189426 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 repressed -2.84 0.300017734 0.852050364 DES460 + 0.02% MMS - 15 min 920 repressed -1.23 0.297731473 0.366209712 DES460 (wt) - mock irradiation - 5 min 944 repressed 0.009 0.295420478 -0.002658784 8. Expression during the cell cycle (cell size selection and release)(5) 69 induced 1.1 0.294907131 0.324397844 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 repressed -1.737 0.294018107 0.510709452 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 repressed -1.802 0.293914038 0.529633096 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 repressed -1.359 0.292799141 0.397914033 513. Brown enviromental changes :29C to 33C - 5 minutes(1) 711 repressed -2.47 0.286950252 0.708767122 630. Brown enviromental changes :DBYmsn2/4 (real strain) + 0.32 mM H2O2 (20 min)(1) 821 repressed -1.25 0.286052361 0.357565452 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 repressed -2.084 0.284454919 0.592804051 mec1_plus_gamma_5_min 948 repressed -1.2 0.28436345 0.34123614 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 repressed -2.32 0.280274407 0.650236625 DES460 + 0.02% MMS - 30 min 921 repressed -1.43 0.279618256 0.399854107 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 induced 1.56 0.278589696 0.434599925 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 repressed -3.084 0.276775714 0.853576302 501. Brown enviromental changes :Heat Shock 030inutes hs-2(1) 699 repressed -2.56 0.269225313 0.6892168 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 repressed -1.07 0.265994493 0.284614108 583. Brown enviromental changes :Nitrogen Depletion 30 min.(1) 781 repressed -2.32 0.262097256 0.608065634 DES460 + 0.2% MMS - 45 min 922 repressed -0.95 0.261702445 0.248617323 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 repressed -1.69 0.258783368 0.437343891 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 repressed -2.74 0.25861023 0.708592029 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 repressed -3.32 0.257588202 0.855192832 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 repressed -3.47 0.257480866 0.893458606 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 repressed -3.084 0.257163058 0.79309087 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 repressed -0.47 0.256126563 0.120379485 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 induced 1.4 0.246978253 0.345769554 DES460 + 0.02% MMS - 60 min 923 repressed -0.97 0.245597349 0.238229429 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 repressed -1.25 0.244307915 0.305384894 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 repressed -1.22 0.242437465 0.295773707 wt_plus_gamma_5_min 936 repressed -1.17 0.242071122 0.283223213 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 repressed -0.54 0.241371103 0.130340396 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 repressed -2 0.240162871 0.480325742 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 induced 0.95 0.23413291 0.222426265 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 repressed -1.25 0.233163151 0.291453939 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 induced 0 0.231233433 0 629. Brown enviromental changes :DBYmsn2msn4 (good strain) + 0.32 mM H2O2(1) 820 repressed -1.19 0.23023474 0.27397934 gal4-gal 987 repressed -2.834 0.229758727 0.651136232 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 repressed -3.47 0.229411518 0.796057966 375. Rosetta 2000: Expression in yor006c deletion mutant (1) 494 induced 0.538 0.228562162 0.122966443 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 repressed -1.556 0.228306888 0.355245518 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 repressed -3.084 0.22574902 0.696209978 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 repressed -1.74 0.225593149 0.39253208 YLR076C 1101 repressed -0.1831 0.2237325 0.040965421 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 induced 0.937 0.221648777 0.207684904 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 repressed -0.618 0.220723819 0.13640732 578. Brown enviromental changes :aa starv 0.5 h(1) 776 repressed -2.12 0.220461079 0.467377487 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 repressed -2.64 0.21887437 0.577828337 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 repressed 0 0.218201885 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 repressed -2.517 0.218048815 0.548828866 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 repressed -1.36 0.217612936 0.295953593 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 repressed -1.234 0.216436438 0.267082565 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 induced 1.08 0.215251073 0.232471159 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 repressed -0.85 0.214837129 0.18261156 ( trp- 2% Glucose-203687) fus3 (+Vector) 5mM aF, 30 min. 895 repressed -0.47 0.214515587 0.100822326 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 repressed -0.51 0.214503453 0.109396761 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 repressed -1.252 0.214195912 0.268173282 DES460 + 0.02% MMS - 90 min 924 repressed -1.27 0.210596416 0.267457448 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(4) 567 induced 0.392 0.209150644 0.081987052 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 repressed -2.227 0.208718032 0.464815058 trp- 2% Glucose-Average fus3 (+Vector) 5mM aF, 30 min. 897 repressed -0.61 0.208517827 0.127195875 trp- 2% Glucose-Average fus3 (+Fus3K42R) 5mM aF, 30 min. 901 repressed -0.69 0.207069722 0.142878108 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 repressed -2.15 0.206099963 0.44311492 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 repressed -2.517 0.202093056 0.508668221 547. Brown enviromental changes :2.5mM DTT 090 min dtt-1(1) 745 repressed -1.69 0.201706646 0.340884231 DES459 (mec1) + heat 20 min 961 repressed -0.9 0.201415438 0.181273894 gal4+gal 978 repressed -2.113 0.201020627 0.424756585 ( trp- 2% Glucose-203792) fus3 (+Fus3K42R) 5mM aF, 30 min. 899 repressed -0.63 0.199585589 0.125738921 503. Brown enviromental changes :37C to 25C shock - 15 min(1) 701 induced 0.69 0.199191245 0.137441959 523. Brown enviromental changes :constant 0.32 mM H2O2 (10 min) redo(1) 721 repressed -2.84 0.198775901 0.564523558 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 induced 0.66 0.195740153 0.129188501 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 repressed -0.415 0.195630483 0.081186651 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 repressed -2.15 0.193703565 0.416462666 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 induced 0.85 0.193530894 0.16450126 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 repressed -1.12 0.193406758 0.216615568 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 repressed -1.03 0.192621803 0.198400457 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 repressed -0.76 0.192560202 0.146345753 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 repressed -0.94 0.192080922 0.180556067 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 repressed -3.084 0.191011294 0.58907883 DES460 + 0.02% MMS - 120 min 925 repressed -1.24 0.190455479 0.236164794 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 repressed -2.15 0.188849636 0.406026717 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 repressed -0.249 0.188670431 0.046978937 8. Expression during the cell cycle (cell size selection and release)(12) 76 repressed -0.78 0.187697405 0.146403976 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 repressed -1.18 0.186804648 0.220429485 440. Expression in strain TS19-4c in response to 30 min 50 nM treatment with rapamycin in YPD(1) 597 repressed -0.631 0.185936625 0.11732601 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 induced -0.09 0.18548768 -0.016693891 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 repressed -0.86 0.185406944 0.159449972 625. Brown enviromental changes :DBYmsn2/4 (real strain) + 37degrees (20 min)(1) 816 repressed -1.12 0.18536401 0.207607691 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 repressed -2.74 0.184849729 0.506488258 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 repressed -2.47 0.184229046 0.455045744 8. Expression during the cell cycle (cell size selection and release)(6) 70 induced 0.71 0.18398684 0.130630656 486. Expression in response to NaCl: 15 30 45 60 120 min(4) 679 repressed -2.359 0.183607896 0.433131027 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 repressed -0.505 0.183344689 0.092589068 455. Expression in response to high MNNG (27 microgram/ml) for 60 min(1) 612 repressed -1.641 0.17949692 0.294554446 390. Rosetta 2000: Expression in cells with IDI1 under tet promoter(1) 509 repressed -0.568 0.179025574 0.101686526 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 repressed -0.786 0.178699832 0.140458068 90. Expression in his3 mutant cells(1) 196 repressed -0.048 0.17838529 0.008562494 8. Expression during the cell cycle (cell size selection and release)(4) 68 induced 0.89 0.178202352 0.158600093 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 repressed -0.89 0.178009614 0.158428556 wt_plus_gamma_10_min 937 repressed -0.61 0.177721673 0.10841022 YJL039C 1079 induced 0.33615 0.177464066 0.059654546 269. Rosetta 2000: Expression in sod1 (haploid) deletion mutant (1) 388 induced 0.618 0.174715792 0.10797436 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 induced 1.21 0.173791768 0.210288039 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(2) 87 repressed -2.736 0.17226246 0.471310091 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 repressed 0 0.172056655 0 119. Rosetta 2000: Expression in arg5,6 deletion mutant (1) 238 induced 0.734 0.172025387 0.126266634 95. Expression in response to 50ug/mL FK506(1) 201 repressed 0.361 0.171319302 -0.061846268 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 repressed -0.55 0.17011247 0.093561858 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(9) 221 repressed 0 0.170000467 0 ( trp- 2% Glucose-203390) fus3 (+Fus3K42R) 5mM aF, 30 min. 900 repressed -0.76 0.169888464 0.129115232 139. Rosetta 2000: Expression in cmk2 deletion mutant (1) 258 repressed -0.242 0.169179111 0.040941345 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 repressed -0.42 0.168486093 0.070764159 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 repressed -0.116 0.167992346 0.019487112 371. Rosetta 2000: Expression in ymr269w deletion mutant (1) 490 induced 0.824 0.167955012 0.13839493 505. Brown enviromental changes :37C to 25C shock - 45 min(1) 703 induced -1.6 0.167706272 -0.268330035 YLR101C 1103 repressed -0.088297 0.167572802 0.014796176 6. Expression during the cell cycle (cdc15 arrest and release)(21) 44 repressed -0.37 0.167216259 0.061870016 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 repressed -0.046 0.16612423 0.007641715 628. Brown enviromental changes :DBY7286 + 0.3 mM H2O2 (20 min)(1) 819 repressed 0.1 0.16599496 -0.016599496 553. Brown enviromental changes :dtt 060 min dtt-2(1) 751 repressed -1.15 0.165776554 0.190643037 MHY1 (dun1) + heat 20 min 962 repressed -0.56 0.165763487 0.092827553 pho85 vs WT(1) 582 repressed -0.377 0.165506347 0.062395893 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 repressed -0.326 0.163939705 0.053444344 sfp1::GALSFP1 t=30min GAL vs. t=0 RAFF (YT00271) 1003 induced -0.08 0.163695165 -0.013095613 YKL033W 1204 repressed -0.0063052 0.163304088 0.001029665 350. Rosetta 2000: Expression in yml034w deletion mutant (1) 469 induced 0.219 0.162944279 0.035684797 YOR236W 1158 repressed -0.16338 0.16213599 0.026489778 trp- 2% Glucose-Average fus3 (+Fus3T180A,Y182F) 5mM aF, 30 min. 905 repressed -0.68 0.161600709 0.109888482 DES459 (mec1-) + 0.02% MMS - 5 min 926 induced 0.215 0.160693018 0.034548999 545. Brown enviromental changes :2.5mM DTT 045 min dtt-1(1) 743 repressed -0.09 0.160584282 0.014452585 650. Brown enviromental changes :21 deg growth ct-1(1) 841 induced 0.39 0.160063002 0.062424571 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 induced 0.116 0.159810062 0.018537967 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 induced 0.369 0.159138977 0.058722283 624. Brown enviromental changes :DBYmsn2-4- 37degree heat - 20 min(1) 815 repressed -0.53 0.158696099 0.084108932 YCR013C 1028 repressed -0.096764 0.158044148 0.015292984 ( trp- 2% Glucose-203686) fus3 (+Vector) 5mM aF, 30 min. 896 repressed -0.76 0.157721206 0.119868116 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 induced 1.6 0.157074389 0.251319022 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 induced 0.86 0.155860556 0.134040078 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 repressed -1.64 0.15536821 0.254803864 579. Brown enviromental changes :aa starv 1 h(1) 777 repressed -0.3 0.155340676 0.046602203 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 repressed -0.359 0.15476806 0.055561734 77. Expression in tec1 deletion mutant cells(1) 183 repressed -0.024 0.153921971 0.003694127 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 induced -0.269 0.153761434 -0.041361826 gal7+gal 981 repressed -1.222 0.1537535 0.187886777 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 induced 0.22 0.153621897 0.033796817 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 induced 0.43 0.153398357 0.065961294 YPL126W 1170 induced 0.27996 0.153350289 0.042931947 YPR144C 1177 induced 0.26518 0.153330689 0.040660232 546. Brown enviromental changes :2.5mM DTT 060 min dtt-1(1) 744 repressed 0 0.152852343 0 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 repressed -1.641 0.152340862 0.249991355 CAT8OE+ 1226 induced 0.0532675 0.152331996 0.008114345 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 repressed -1.94 0.151301101 0.293524137 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 repressed -1.748 0.150954825 0.263869035 ( trp- 2% Glucose-203696) fus3 (+Fus3T180A,Y182F) 5mM aF, 30 min. 904 repressed -0.8 0.150836756 0.120669405 649. Brown enviromental changes :17 deg growth ct-1(1) 840 induced 0.53 0.149431118 0.079198493 YOR004W 1219 induced 0.20122 0.149280381 0.030038198 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 repressed -2.15 0.149210379 0.320802315 462. Expression in response to 0.05% MMS for 60 min(1) 619 repressed -1.274 0.148644297 0.189372835 247. Rosetta 2000: Expression in rpl8a deletion mutant (1) 366 induced 0.628 0.146639444 0.092089571 gal6+gal 980 repressed -0.488 0.146506907 0.071495371 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 repressed -0.176 0.146402837 0.025766899 453. Expression in response to gama-ray exposure (30 kilorad) for 60 min(1) 610 repressed -1.641 0.146106963 0.239761526 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 repressed -1.474 0.145055068 0.21381117 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -1.832 0.144986466 0.265615206 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 repressed -0.52 0.144904797 0.075350495 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 repressed -0.29 0.144343382 0.041859581 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 repressed -0.32 0.144162778 0.046132089 ( trp- 2% Glucose-228585) wt vs fus3 (+Fus3T180A,Y182F) + 5mM aF, 30 min. 911 repressed 0 0.14385897 0 651. Brown enviromental changes :25 deg growth ct-1(1) 842 induced 0.56 0.143856169 0.080559455 91. Expression in his3 mutant cells in response to 3-aminotriazole(1) 197 repressed -0.085 0.143742766 0.012218135 Expression in PDR3-7 mutant(1) 556 induced 0.356 0.143606496 0.051123913 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 induced 0.2 0.142467799 0.02849356 146. Rosetta 2000: Expression in dfr1 deletion mutant (1) 265 repressed -0.183 0.141714579 0.025933768 230. Rosetta 2000: Expression in rad27 deletion mutant (1) 349 induced 0.233 0.141200299 0.03289967 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 induced 0.33 0.141088296 0.046559138 32. Young: Expression in swi2 mutant(1) 116 repressed 0.259 0.140966026 -0.036510201 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 repressed -0.4 0.140755087 0.056302035 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 induced 0.081 0.139729793 0.011318113 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 repressed 1.282 0.139535654 -0.178884709 395. Rosetta 2000: Expression in response to 2-deoxy-D-glucose(1) 514 induced 0.997 0.139452119 0.139033762 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 induced 0.11 0.138936438 0.015283008 1. Cell cycle: Expression in response to Cln3p (set 1)(1) 2 repressed -0.81 0.1387423 0.112381263 WT/sok2+ 1312 repressed 0.0110395 0.138333956 -0.001527138 526. Brown enviromental changes :constant 0.32 mM H2O2 (40 min) rescan(1) 724 repressed -1.29 0.13763767 0.177552595 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(6) 545 induced 0.37 0.13725826 0.050785556 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 induced 0.84 0.136928785 0.115020179 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 repressed -2.32 0.136827515 0.317439836 520. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 5 minutes(1) 718 repressed 0.08 0.136217099 -0.010897368 8. Expression during the cell cycle (cell size selection and release)(1) 65 repressed -0.12 0.135441478 0.016252977 mec1_plus_gamma_10_min 949 repressed -0.386 0.135323409 0.052234836 445. Expression in response to 0.1% MMS for 60 min (average of 3 experiments)(1) 602 repressed -1.038 0.134643457 0.139759909 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 repressed -1.47 0.134589322 0.197846304 101. Young: Expression in spt3 deletion mutant(1) 207 repressed -1.012 0.134554321 0.136168973 100. Young: Expression in spt20 deletion mutant(1) 206 repressed -0.856 0.134399851 0.115046272 54. Expression in response to overproduction of Ste5p(1) 159 induced 0.066 0.134320049 0.008865123 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.492 0.134310715 0.066080872 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 repressed -1.789 0.134175378 0.240039751 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 repressed -1.6 0.133343289 0.213349263 YEL055C 1048 induced 0.10939 0.132938678 0.014542162 113. Rosetta 2000: Expression in ald5 deletion mutant (1) 232 induced 0.08 0.132884544 0.010630763 638. Brown enviromental changes :glucose car-1(1) 829 induced 0.99 0.132570935 0.131245226 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 repressed -2.017 0.132465932 0.267183786 Addition of 1M NaCl (90) 917 repressed -1.47 0.132341796 0.19454244 464. Expression in response to 0.2% MMS for 60 min(1) 621 repressed -1.478 0.132105656 0.19525216 456. Expression in response to high 4NQO (8 microgram/ml) for 60 min(1) 613 repressed -1.167 0.131900317 0.15392767 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 repressed -0.555 0.131490106 0.072977009 YPL243W 1174 repressed -0.076754 0.131304368 0.010078135 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 repressed -0.01 0.131302501 0.001313025 457. Expression of G1 arrested cells (with alpha factor) in response to 0.1% MMS for 60 min(1) 614 repressed -0.189 0.131266567 0.024809381 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 repressed -0.312 0.130593616 0.040745208 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 induced -0.704 0.130418144 -0.091814374 YKR079C 1094 repressed -0.18828 0.13036961 0.02454599 450. Expression in response to low MNNG (8 microgram/ml) for 60 min(1) 607 repressed -0.336 0.130074669 0.043705089 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 repressed -0.1 0.129918798 0.01299188 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 repressed -0.305 0.129763394 0.039577835 372. Rosetta 2000: Expression in ymr285c deletion mutant (1) 491 repressed 0.043 0.129224846 -0.005556668 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 repressed 0 0.128939238 0 486. Expression in response to NaCl: 15 30 45 60 120 min(5) 680 repressed -2.977 0.128793168 0.383417261 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 repressed -0.14 0.128393224 0.017975051 385. Rosetta 2000: Expression in cells with AUR1 under tet promoter(1) 504 induced 0.428 0.128221486 0.054878796 DES460 (wild type) + heat 20 min 960 repressed -0.51 0.127959679 0.065259436 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced 0.143 0.127468732 0.018228029 542. Brown enviromental changes :2.5mM DTT 005 min dtt-1(1) 740 induced -0.64 0.126853649 -0.081186336 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 repressed -0.447 0.126578309 0.056580504 mec1_plus_gamma_30_min 951 induced -0.008 0.126504107 -0.001012033 DES459 (mec1) - mock irradiation - 5 min 956 repressed -1.677 0.126441572 0.212042516 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 repressed 0.08 0.126051428 -0.010084114 trp- 2% Glucose-Average wt vs fus3 (+Fus3T180A,Y182F) + 5mM aF, 30 min. 913 repressed 0 0.125805488 0 35. Young: Expression in tfa1 mutant(1) 119 repressed -2.004 0.125592216 0.2516868 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 induced 0.379 0.124959866 0.047359789 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 induced 0.724 0.124101643 0.089849589 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 induced 0.342 0.123948572 0.042390412 293. Rosetta 2000: Expression in ubr2 deletion mutant (1) 412 induced 0.322 0.123389024 0.039731266 44. Expression in snf2 mutant cells in YPD(1) 134 repressed -0.664 0.123306888 0.081875774 294. Rosetta 2000: Expression in utr4 deletion mutant (1) 413 repressed -0.12 0.12312255 0.014774706 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(3) 566 induced -0.218 0.122889677 -0.02678995 318. Rosetta 2000: Expression in yer002w deletion mutant (1) 437 induced 0.036 0.122856076 0.004422819 178. Rosetta 2000: Expression in gfd1 deletion mutant (1) 297 repressed -0.106 0.122577002 0.012993162 gal2-gal 985 repressed -1.166 0.122506067 0.142842074 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 repressed -0.89 0.122079522 0.108650775 55. Expression in response to overproduction of Ste11p(1) 160 induced 0.068 0.122069255 0.008300709 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 repressed 0.06 0.122043588 -0.007322615 YDR141C 1042 repressed 0.12771 0.121962852 -0.015575876 278. Rosetta 2000: Expression in ste20 (**11) deletion mutant (1) 397 induced 0.379 0.12163431 0.046099404 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(2) 154 induced -0.018 0.121502707 -0.002187049 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 repressed -0.066 0.121427571 0.00801422 gal3-gal 986 repressed -0.339 0.121100896 0.041053204 (Rich Media 2% Glucose YPD-185440) fus3 5mM aF, 30 min. 880 repressed -0.42 0.12098656 0.050814355 RFX1OE+ 1253 induced 0.020289 0.120947359 0.002453901 YLR457C 1116 repressed -0.080011 0.120918891 0.009674841 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 repressed -0.216 0.120631884 0.026056487 463. Expression in response to 0.1% MMS for 60 min(1) 620 repressed -1.641 0.119841796 0.196660387 319. Rosetta 2000: Expression in yer024w deletion mutant (1) 438 induced 0.07 0.119548721 0.00836841 WT/rox1+ 1307 repressed -0.108647 0.119519787 0.012985466 YMR128W 1125 induced 0.39131 0.119179111 0.046635978 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed -0.13 0.119021374 0.015472779 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 repressed -0.23 0.119017174 0.02737395 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 repressed 0.07 0.118921971 -0.008324538 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 repressed -0.205 0.118427291 0.024277595 wt_plus_gamma_20_min 938 repressed -0.74 0.11823642 0.087494951 RSC30OE+ 1257 induced NaN 0.118165018 0 trp- 2% Glucose-Average wt 5mM aF, 30 min. 909 repressed 0 0.118025014 0 gal2gal80-gal 994 induced 1.322 0.117979746 0.155969224 340. Rosetta 2000: Expression in yhr034c deletion mutant (1) 459 induced -0.332 0.117843943 -0.039124189 216. Rosetta 2000: Expression in pac2 deletion mutant (1) 335 repressed -0.233 0.117821075 0.027452311 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 induced 0.163 0.117444932 0.019143524 YPL231W 1173 repressed -0.080307 0.117059922 0.009400731 602. Brown enviromental changes :YPD 4 h ypd-2(1) 793 repressed -0.54 0.11675238 0.063046285 449. Expression in response to 0.1% MMS for 60 min(1) 606 repressed -0.437 0.116608643 0.050957977 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 repressed -0.289 0.116574575 0.033690052 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced 0.103 0.116556842 0.012005355 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(10) 222 repressed 0 0.116363636 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(3) 665 repressed -1.772 0.116230166 0.205959854 DES460 (wt) - mock irradiation - 90 min 947 repressed 0.101 0.116034161 -0.01171945 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 repressed -1.391 0.115961826 0.161302899 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 repressed -1.09 0.115666418 0.126076395 dun1- + 0.02% MMs - 30 min 933 repressed -0.437 0.115326209 0.050397553 DES459 (mec1-) + 0.02% MMS - 30 min 928 repressed 0.09 0.114978066 -0.010348026 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 repressed 0.21 0.114958466 -0.024141278 341. Rosetta 2000: Expression in yhr039c deletion mutant (1) 460 repressed -0.189 0.114737726 0.02168543 448. Expression in response to 0.1% MMS for 60 min(1) 605 repressed 0 0.114684058 0 YLL035W 1098 induced 0.18758 0.114517454 0.021481184 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 repressed -1.335 0.114335916 0.152638447 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(8) 220 repressed 0 0.114315848 0 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 induced 0.076 0.114284581 0.008685628 YOR119C 1150 induced 0.1329 0.114146444 0.015170062 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(1) 86 repressed -0.791 0.113974706 0.090153992 115. Rosetta 2000: Expression in aqy2-a deletion mutant (1) 234 induced 0.083 0.113906571 0.009454245 348. Rosetta 2000: Expression in yml018c deletion mutant (1) 467 induced 0.086 0.113701699 0.009778346 461. Expression of rpn4 deletion in response to 0.1% MMS for 60 min(1) 618 repressed 0 0.113037614 0 gal3+gal 977 repressed 0.013 0.112899011 -0.001467687 6. Expression during the cell cycle (cdc15 arrest and release)(16) 39 induced 0.38 0.11287101 0.042890984 gal10-gal 991 repressed -0.488 0.112558335 0.054928467 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 induced 0.425 0.112457066 0.047794253 YLL003W 1096 repressed -0.10937 0.112332929 0.012285852 634. Brown enviromental changes :MSN4 overexpression(1) 825 repressed -0.17 0.112287194 0.019088823 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 repressed -0.2 0.112097256 0.022419451 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 repressed -0.71 0.111618443 0.079249095 8. Expression during the cell cycle (cell size selection and release)(10) 74 induced 0.58 0.111462106 0.064648021 246. Rosetta 2000: Expression in rpl6b deletion mutant (1) 365 induced 0.153 0.111447639 0.017051489 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 repressed -1.276 0.111406104 0.142154189 363. Rosetta 2000: Expression in ymr140w deletion mutant (1) 482 repressed -0.1 0.111257234 0.011125723 158. Rosetta 2000: Expression in ecm34 deletion mutant (1) 277 repressed -0.156 0.111174631 0.017343242 SPT2OE+ 1263 induced 0.1083145 0.111123297 0.012036264 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 repressed -0.71 0.110785888 0.07865798 YNL131W 1131 repressed -0.031541 0.110742953 0.003492943 YMR200W 1126 repressed -0.039357 0.110596416 0.004352743 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 repressed -0.52 0.110537148 0.057479317 22. Fink: Expression in haploid high copyt TEC1(1) 106 repressed 0 0.110455945 0 YGR090W 1194 induced 0.20422 0.110385944 0.022543017 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 repressed -0.11 0.110166604 0.012118326 sfp1::GALSFP1 t=50min GAL vs. t=0 RAFF (YT00265) 1005 induced -0.11 0.110166604 -0.012118326 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 repressed -1.804 0.109977133 0.198398747 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 repressed -0.545 0.109620123 0.059742967 78. Expression in kss1 deletion mutant cells(1) 184 induced 0.076 0.109101643 0.008291725 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 repressed -0.146 0.108905171 0.015900155 YGR060W 1058 repressed 0.10776 0.108690032 -0.011712438 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 induced 0.156 0.108435225 0.016915895 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 induced 0.84 0.108429625 0.091080885 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced 0.664 0.108368023 0.071956367 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed -0.49 0.108368023 0.053100331 24. Fink: Expression in diploid ste12/ste12 deletion mutant(1) 108 repressed 0.139 0.10811555 -0.015028061 582. Brown enviromental changes :aa starv 6 h(1) 780 repressed -0.23 0.107938678 0.024825896 YJL072C 1081 repressed 0.010636 0.107926078 -0.001147902 YLR359W 1112 repressed -0.31209 0.107733806 0.033622644 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 induced 0.518 0.107462666 0.055665661 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.083 0.107051521 0.008885276 307. Rosetta 2000: Expression in yea4 deletion mutant (1) 426 induced 0.236 0.107006254 0.025253476 347. Rosetta 2000: Expression in yml011c deletion mutant (1) 466 induced 0.306 0.106935785 0.03272235 34. Young: Expression in taf17 mutant(1) 118 repressed -1.43 0.106840582 0.152782033 YNR054C 1141 induced 0.12425 0.106751913 0.013263925 506. Brown enviromental changes :37C to 25C shock - 60 min(1) 704 induced 1.49 0.106501307 0.158686947 316. Rosetta 2000: Expression in yel059w deletion mutant (1) 435 induced 0.169 0.10638557 0.017979161 YDR047W 1039 repressed -0.1631 0.106298301 0.017337253 144. Rosetta 2000: Expression in cyc2 deletion mutant (1) 263 induced 0.01 0.106146164 0.001061462 YGR251W 1198 induced 0.36991 0.106066362 0.039235008 46. Expression in swi1 mutant cells in YPD(1) 136 repressed -0.271 0.105769087 0.028663423 CRZ1OE+ 1227 repressed -0.287034 0.105497013 0.03028123 262. Rosetta 2000: Expression in sgt2 deletion mutant (1) 381 repressed -0.229 0.105019601 0.024049489 64. Expression in fus3 kss1 double deletion mutant cells(1) 169 induced 0.118 0.104386317 0.012317585 174. Rosetta 2000: Expression in fus3, kss1 (haploid) deletion mutant (1) 293 induced 0.392 0.104386317 0.040919436 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced 0.01 0.10413851 0.001041385 105. Young: Expression in taf90 deletion mutant(1) 211 repressed -0.601 0.104053108 0.062535918 YML031W 1118 repressed -0.10086 0.104013907 0.010490843 104. Young: Expression in taf61 deletion mutant(1) 210 repressed -1.045 0.103935038 0.108612115 YNL158W 1133 repressed -0.047173 0.103916371 0.004902047 8. Expression during the cell cycle (cell size selection and release)(13) 77 repressed -0.64 0.103883237 0.066485272 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.103853836 0 447. Expression in response to 0.1% MMS for 30 min(1) 604 repressed 0 0.103610696 0 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 repressed 0.04 0.103284021 -0.004131361 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed -0.432 0.103228019 0.044594504 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 repressed -0.69 0.103196285 0.071205437 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(7) 546 induced 0.32 0.103193952 0.033022065 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 repressed 0.11 0.103173885 -0.011349127 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced -0.179 0.103157551 -0.018465202 656. Brown enviromental changes :steady state 21 dec C ct-2(1) 847 induced 0.49 0.103024081 0.0504818 5. Expression during the cell cycle (alpha factor arrest and release)(4) 9 repressed -0.27 0.102939145 0.027793569 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 induced 0.203 0.102789808 0.020866331 ( trp- 2% Glucose-203742) fus3 (+Fus3T180A,Y182F) 5mM aF, 30 min. 903 repressed -0.55 0.102709539 0.056490246 310. Rosetta 2000: Expression in yel010w deletion mutant (1) 429 induced 0.113 0.102375397 0.01156842 360. Rosetta 2000: Expression in ymr040w deletion mutant (1) 479 induced 0.266 0.102254527 0.027199704 346. Rosetta 2000: Expression in yml005w deletion mutant (1) 465 induced 0.096 0.102149524 0.009806354 125. Rosetta 2000: Expression in bub1 (haploid **2,10) deletion mutant (1) 244 repressed 0.757 0.102125257 -0.077308819 482. Expression in response to acid: 10,20,40,60,80,100 min(6) 662 repressed -0.484 0.101914784 0.049326756 288. Rosetta 2000: Expression in top1 (haploid) deletion mutant (1) 407 induced 0.372 0.101799515 0.037869419 45. Expression in snf2 mutant cells in minimal medium(1) 135 repressed 0.115 0.101531641 -0.011676139 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 repressed -0.42 0.101272167 0.04253431 YJL091C 1083 repressed 0.14741 0.101216166 -0.014920275 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 repressed -1.74 0.101155031 0.176009754 7. Expression during the cell Cycle (cdc28)(3) 50 induced 0.41 0.101130297 0.041463422 251. Rosetta 2000: Expression in rrp6 deletion mutant (1) 370 induced 0.146 0.101095763 0.014759981 374. Rosetta 2000: Expression in ynd1 deletion mutant (1) 493 induced 0.203 0.101084096 0.020520071 194. Rosetta 2000: Expression in imp2 (**12) deletion mutant (1) 313 induced 0.057 0.100990293 0.005756447 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 induced 0.558 0.100976759 0.056345032 224. Rosetta 2000: Expression in pex12 deletion mutant (1) 343 induced -0.007 0.100895091 -0.000706266 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 repressed -0.352 0.100800821 0.035481889 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed 0.044 0.100727086 -0.004431992 YNL149C 1213 repressed -0.10497 0.100558148 0.010555589 208. Rosetta 2000: Expression in mnn1 deletion mutant (1) 327 repressed -0.096 0.10050168 0.009648161 gal4gal80-gal 995 induced 1.133 0.100448012 0.113807598 444. Expression in wild type versus strain YHE710 (mks1 deletion) under steady state conditions in YPD(1) 601 induced 0.365 0.100414411 0.03665126 YJL097W 1202 repressed 0.13646 0.100399477 -0.013700513 YLR106C 1209 induced 0.19602 0.100285608 0.019657985 6. Expression during the cell cycle (cdc15 arrest and release)(23) 46 repressed -1.09 0.100189938 0.109207033 YML046W 1119 repressed -0.082584 0.099615456 0.008226643 641. Brown enviromental changes :sucrose car-1(1) 832 induced 0.63 0.099604723 0.062750975 gal1+gal 975 induced 0.797 0.099160444 0.079030874 YAL038W 1010 repressed -0.12839 0.098632164 0.012663383 7. Expression during the cell Cycle (cdc28)(11) 58 repressed -0.37 0.098497293 0.036443999 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced 0.206 0.097863543 0.02015989 236. Rosetta 2000: Expression in rgt1 deletion mutant (1) 355 repressed 0.076 0.097688538 -0.007424329 249. Rosetta 2000: Expression in rps24a (haploid) deletion mutant (1) 368 induced -0.133 0.096764047 -0.012869618 WT/bye1+ 1279 induced 0.0185325 0.096737913 0.001792795 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 repressed -0.047 0.09661191 0.00454076 ( trp- 2% Glucose-203697) wt vs fus3 (+Fus3T180A,Y182F) 891 induced -0.22 0.096475639 -0.021224641 322. Rosetta 2000: Expression in yer034w deletion mutant (1) 441 induced 0.103 0.096373437 0.009926464 320. Rosetta 2000: Expression in yer030w deletion mutant (1) 439 induced -0.309 0.096341702 -0.029769586 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 induced 0.33 0.096069162 0.031702823 6. Expression during the cell cycle (cdc15 arrest and release)(24) 47 repressed -0.45 0.095960426 0.043182192 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced -0.046 0.095959492 -0.004414137 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 induced -0.14 0.09588249 -0.013423549 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 repressed -0.2 0.095806888 0.019161378