Input Cluster (n=200) YAR035W YAT1 YAR068W YBL015W ACH1 YBL042C FUI1 YBL043W ECM13 YBR016W YBR023C CHS3 YBR104W YMC2 YBR105C VID24 YBR106W PHO88 YBR203W YBR230C YBR240C THI2 YCL024W KCC4 YCL040W GLK1 YCL043C PDI1 YCR010C ADY2 YCR061W YCR075C ERS1 YCR105W YCR107W AAD3 YDL047W SIT4 YDL079C MRK1 YDL183C YDL214C PRR2 YDL215C GDH2 YDR006C SOK1 YDR007W TRP1 YDR011W SNQ2 YDR054C CDC34 YDR055W PST1 YDR072C IPT1 YDR155C CPR1 YDR156W RPA14 YDR158W HOM2 YDR247W YDR288W YDR297W SUR2 YDR359C VID21 YDR406W PDR15 YDR462W MRPL28 YDR510W SMT3 YDR525W-A SNA2 YEL017C-A PMP2 YEL017W YER035W EDC2 YER036C KRE30 YER037W PHM8 YER075C PTP3 YER112W LSM4 YER130C YER137C YER145C FTR1 YER146W LSM5 YER152C YER176W ECM32 YFL023W BUD27 YFL024C EPL1 YFR031C-A RPL2A YGL056C SDS23 YGL062W PYC1 YGL179C YGL186C YGL209W MIG2 YGR019W UGA1 YGR035C YGR055W MUP1 YGR067C YGR130C YGR204W ADE3 YGR223C YGR224W AZR1 YGR241C YAP1802 YGR243W YHL024W RIM4 YHR051W COX6 YHR136C SPL2 YHR137W ARO9 YHR199C YHR200W RPN10 YIL031W ULP2 YIL033C BCY1 YIL046W MET30 YIL072W HOP1 YIL073C SPO22 YIL122W POG1 YIR011C STS1 YIR012W SQT1 YIR035C YJL089W SIP4 YJL219W HXT9 YJR113C RSM7 YJR115W YJR137C ECM17 YJR152W DAL5 YKL032C IXR1 YKL051W YKL052C ASK1 YKL064W MNR2 YKL065C YET1 YKR006C MRPL13 YKR075C YKR079C YKR094C RPL40B YLL028W TPO1 YLL041C SDH2 YLR004C YLR005W SSL1 YLR081W GAL2 YLR121C YPS3 YLR139C SLS1 YLR162W YLR254C YLR278C YLR298C YHC1 YLR299W ECM38 YLR304C ACO1 YLR337C VRP1 YLR346C YLR348C DIC1 YLR350W ORM2 YLR373C VID22 YLR399C BDF1 YLR437C YLR438W CAR2 YLR448W RPL6B YML042W CAT2 YML058W SML1 YML073C RPL6A YML100W TSL1 YML101C CUE4 YML123C PHO84 YMR015C ERG5 YMR018W YMR181C YMR183C SSO2 YMR195W ICY1 YMR244C-A YMR246W FAA4 YMR251W-A HOR7 YMR265C YMR266W RSN1 YMR272C SCS7 YMR291W YNL055C POR1 YNL139C RLR1 YNL151C RPC31 YNL193W YNL194C YNL299W TRF5 YNL304W YPT11 YNL305C YNR001C CIT1 YNR019W ARE2 YOL012C HTZ1 YOL030W GAS5 YOL031C YOL039W RPP2A YOL040C RPS15 YOL084W PHM7 YOL125W YOL155C YOR052C YOR084W YOR100C CRC1 YOR137C SIA1 YOR138C YOR140W SFL1 YOR153W PDR5 YOR161C YOR163W DDP1 YOR185C GSP2 YOR186W YOR301W RAX1 YOR312C RPL20B YOR316C COT1 YOR342C YOR349W CIN1 YOR374W ALD4 YOR378W YOR382W FIT2 YPL055C LGE1 YPL082C MOT1 YPL111W CAR1 YPL120W VPS30 YPL121C MEI5 YPL135W ISU1 YPL139C UME1 YPL161C BEM4 YPL171C OYE3 YPL221W BOP1 YPR054W SMK1 YPR063C YPR065W ROX1 YPR074C TKL1 YPR127W YPR138C MEP3 YPR151C YPR163C TIF3 YPR164W MMS1 Genes Not Found: MIPS Functional Classification Category p-value In Category from Cluster k f lipid and fatty-acid transport 0.00042209 YAT1 PDI1 SNQ2 FAA4 PDR5 5 21 plasma membrane 0.000684714 FUI1 CHS3 SNQ2 PMP2 FTR1 MUP1 YAP1802 HXT9 DAL5 GAL2 PHO84 SSO2 PDR5 13 145 TRANSPORT FACILITATION 0.000893355 YAT1 SNQ2 PDR15 PMP2 KRE30 FTR1 YGL186C MUP1 AZR1 HXT9 DAL5 TPO1 YLR004C GAL2 DIC1 PHO84 POR1 PDR5 COT1 YOR378W MEP3 21 312 ion transporters 0.00322967 SNQ2 PMP2 FTR1 DIC1 PHO84 PDR5 COT1 MEP3 8 78 phosphate transport 0.00325479 PHO88 DIC1 PHO84 3 10 METABOLISM 0.00389768 YAT1 ACH1 FUI1 CHS3 PHO88 GLK1 PDI1 ADY2 YCR105W AAD3 GDH2 TRP1 SNQ2 CDC34 IPT1 HOM2 SUR2 PYC1 YGL186C MIG2 UGA1 MUP1 ADE3 ARO9 BCY1 MET30 YIR035C HXT9 ECM17 GAL2 ECM38 ACO1 DIC1 CAR2 CAT2 SML1 TSL1 PHO84 ERG5 FAA4 SCS7 CIT1 ARE2 PDR5 CAR1 ISU1 BEM4 ROX1 TKL1 49 1066 MIPS Phenotypes Category p-value In Category from Cluster k f MIPS Subcellular Localization Category p-value In Category from Cluster k f plasma membrane 0.000151393 FUI1 CHS3 SNQ2 PST1 PMP2 MUP1 YAP1802 HXT9 DAL5 GAL2 YPS3 VID22 PHO84 SSO2 PDR5 15 159 MIPS Protein Complexes Category p-value In Category from Cluster k f MIPS Protein Classes Category p-value In Category from Cluster k f Major facilitator superfamily proteins (MFS) 0.000560672 FUI1 YGL186C MUP1 AZR1 HXT9 DAL5 TPO1 YLR004C GAL2 PHO84 COT1 YOR378W MEP3 13 142 HMG 0.0029765 IXR1 ROX1 2 3 GO Molecular Function Category p-value In Category from Cluster k f transporter [GO:0005215] 0.00029115 FUI1 YMC2 PHO88 ERS1 SNQ2 PDR15 KRE30 FTR1 MUP1 AZR1 COX6 HXT9 ECM17 DAL5 MNR2 GAL2 DIC1 PHO84 SSO2 POR1 CRC1 PDR5 COT1 OYE3 MEP3 25 372 carnitine O-acetyltransferase [GO:0004092] 0.0029765 YAT1 CAT2 2 3 carnitine O-acyltransferase [GO:0016406] 0.0029765 YAT1 CAT2 2 3 O-acyltransferase [GO:0008374] 0.00325479 YAT1 CAT2 ARE2 3 10 GO Biological Process Category p-value In Category from Cluster k f ion transport [GO:0006811] 0.000903423 PHO88 PMP2 DAL5 MNR2 DIC1 PHO84 POR1 SIA1 COT1 MEP3 10 96 arginine catabolism [GO:0006527] 0.00101352 CAR2 CAR1 2 2 GO Cellular Component Category p-value In Category from Cluster k f nuclear chromosome [GO:0000228] 0.000407383 IXR1 SFL1 MOT1 ROX1 4 12 cell [GO:0005623] 0.00166059 YAT1 ACH1 FUI1 CHS3 YMC2 VID24 PHO88 KCC4 GLK1 PDI1 ERS1 SIT4 GDH2 SOK1 TRP1 SNQ2 CDC34 IPT1 CPR1 RPA14 SUR2 PDR15 MRPL28 SMT3 PMP2 PTP3 LSM4 FTR1 LSM5 ECM32 EPL1 RPL2A SDS23 PYC1 YGL179C MIG2 UGA1 MUP1 YGR130C ADE3 AZR1 YAP1802 RIM4 COX6 SPL2 RPN10 ULP2 BCY1 MET30 HOP1 POG1 STS1 SQT1 YIR035C SIP4 HXT9 RSM7 DAL5 IXR1 ASK1 MNR2 MRPL13 YKR075C RPL40B SDH2 SSL1 GAL2 YPS3 SLS1 YHC1 ECM38 ACO1 VRP1 DIC1 ORM2 VID22 BDF1 YLR437C CAR2 RPL6B CAT2 SML1 RPL6A CUE4 PHO84 ERG5 SSO2 FAA4 HOR7 SCS7 POR1 RLR1 RPC31 YNL194C TRF5 CIT1 ARE2 HTZ1 YOL031C RPP2A RPS15 YOR084W CRC1 YOR138C SFL1 PDR5 GSP2 RPL20B COT1 CIN1 ALD4 MOT1 CAR1 VPS30 ISU1 UME1 ROX1 TKL1 MEP3 TIF3 120 3106 integral membrane protein [GO:0016021] 0.00200172 ERS1 PDR15 MUP1 SLS1 ORM2 VID22 PHO84 SSO2 YNL194C 9 89 plasma membrane [GO:0005886] 0.00434988 FUI1 SNQ2 FTR1 MUP1 HXT9 DAL5 GAL2 YPS3 VID22 PHO84 SSO2 PDR5 MEP3 13 178 SMART Domains Category p-value In Category from Cluster k f PFam-A Domains Category p-value In Category from Cluster k f PF01159 (Ribosomal_L6e) 0.00101352 RPL6B RPL6A 2 2 PF00755 (Carn_acyltransf) 0.0029765 YAT1 CAT2 2 3 Yeast Two Hybrid - Uetz Category p-value In Category from Cluster k f Yeast Two Hybrid - Ito (core) Category p-value In Category from Cluster k f Yeast Two Hybrid - Ito (full) Category p-value In Category from Cluster k f YNL088W (TOP2) 0.0029765 SMT3 FAA4 2 3 Synthetic Genetic Array Analysis Category p-value In Category from Cluster k f MDS Proteomics Complexes Category p-value In Category from Cluster k f YOR181W (LAS17) 0.00172766 SQT1 GAL2 VRP1 PHO84 4 17 YJL098W (SAP185) 0.00216637 SIT4 VID21 EPL1 POR1 4 18 Cellzome Complexes Category p-value In Category from Cluster k f Proteome Localization--Observed Category p-value In Category from Cluster k f cyto 0.00284451 ACH1 YBR016W PHO88 YBR203W GLK1 SIT4 YDL183C PRR2 GDH2 CPR1 HOM2 PHM8 YER137C YER152C BUD27 PYC1 YGL179C UGA1 YGR130C ADE3 YGR243W RIM4 SPL2 ARO9 RPN10 ULP2 SQT1 YIR035C YJR115W ECM17 YKL051W YKR075C TPO1 ECM38 VRP1 YLR437C CAR2 SML1 TSL1 CUE4 YMR181C YMR244C-A FAA4 YMR291W RPS15 PHM7 YOL155C YOR052C YOR084W YOR138C DDP1 YOR186W YOR378W CAR1 OYE3 BOP1 SMK1 TKL1 TIF3 59 1324 Proteome Localization--Predicted+Observed Category p-value In Category from Cluster k f Deletions Consortium (Essentiality, Morphology) Category p-value In Category from Cluster k f Morphology - WT 0.000617776 ACH1 FUI1 ECM13 YBR016W CHS3 YBR203W YBR230C THI2 KCC4 GLK1 ADY2 YCR061W ERS1 YCR105W AAD3 YDL183C PRR2 GDH2 SOK1 TRP1 SNQ2 PST1 IPT1 CPR1 HOM2 YDR247W SUR2 PDR15 SNA2 PMP2 YEL017W PHM8 PTP3 RPL2A SDS23 PYC1 MIG2 UGA1 YGR035C MUP1 YGR130C ADE3 YGR223C AZR1 YAP1802 YGR243W RIM4 COX6 SPL2 ARO9 YHR199C SPO22 YIR035C SIP4 YJR115W DAL5 YKL051W MNR2 YET1 YKR075C RPL40B TPO1 SDH2 YLR004C GAL2 YPS3 YLR254C YLR278C ECM38 ACO1 YLR346C DIC1 ORM2 VID22 BDF1 YLR437C CAR2 RPL6B CAT2 SML1 TSL1 CUE4 PHO84 ERG5 YMR018W YMR181C SSO2 ICY1 YMR244C-A FAA4 HOR7 YMR265C RSN1 YMR291W POR1 YNL193W YNL194C TRF5 YPT11 YNL305C CIT1 ARE2 HTZ1 GAS5 YOL031C RPP2A PHM7 YOL125W YOL155C YOR052C YOR084W CRC1 SIA1 YOR138C YOR161C DDP1 GSP2 YOR186W RAX1 RPL20B COT1 YOR342C ALD4 YOR378W FIT2 LGE1 CAR1 VPS30 MEI5 ISU1 UME1 OYE3 BOP1 SMK1 ROX1 TKL1 YPR127W MEP3 YPR151C TIF3 140 3689 Yeast Fitness Data Category p-value In Category from Cluster k f Published Complexes Category p-value In Category from Cluster k f