Rds1-primary_8mers_11111111_lteq600sum0.35thrbgdsub.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 repressed -1.22 0.097918689 0.119460801 -0.0109582276068841 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced -0.01 0.12811053 -0.001281105 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.28 0.139673264 -0.039108514 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed -0.43 0.104358663 0.044874225 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed -0.13 0.136357356 0.017726456 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed -0.6 0.114365665 0.068619399 7. Expression during the cell Cycle (cdc28)(1) 48 induced -0.13 0.098720127 -0.012833617 7. Expression during the cell Cycle (cdc28)(2) 49 repressed -0.23 0.110756628 0.025474024 7. Expression during the cell Cycle (cdc28)(7) 54 repressed 0.25 0.103539955 -0.025884989 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.06 0.14004621 -0.008402773 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced 0.02 0.109687733 0.002193755 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed 0.11 0.113182879 -0.012450117 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed 0 0.127512603 0 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced -0.13 0.128197816 -0.016665716 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed 0.04 0.105426624 -0.004217065 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced -0.64 0.117601755 -0.075265123 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -0.5 0.116627147 -0.058313574 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced -0.06 0.096323282 -0.005779397 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced 0.322 0.169687733 0.05463945 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 induced 1.089 0.098729929 0.107516893 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 repressed 0.304 0.102858943 -0.031269119 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.622 0.100381348 -0.062437198 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.713 0.130695482 -0.093185878 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.304 0.117659167 -0.035768387 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.474 0.145613331 -0.069020719 12. Expression in tup1-deleted cells(1) 96 induced -1.152 0.151497386 -0.174524989 15. evolved strain 1 versus evolved strain 1(1) 99 repressed -0.06 0.120877987 0.007252679 16. parental strain versus evolved strain 1(1) 100 bimodal -0.49 0.105028473 -0.051463952 17. parental strain versus evolved strain 2(1) 101 induced 0 0.108390123 0 18. parental strain versus evolved strain 3(1) 102 bimodal -0.71 0.150234783 -0.106666696 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.117726382 0 24. Fink: Expression in diploid ste12/ste12 deletion mutant(1) 108 induced 0 0.10150112 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.10148245 0 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.110833178 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.114725541 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.166620146 0 32. Young: Expression in swi2 mutant(1) 116 bimodal 0.004 0.134395538 0.000537582 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.139856236 0 34. Young: Expression in taf17 mutant(1) 118 induced 0 0.108991318 0 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.110099421 0 37. Young: Expression in gcn5 mutant(1) 121 induced 0 0.113635642 0 39. Young: Expression in sir2 deletion mutant(1) 129 induced 0 0.099442681 0 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.103471341 0 44. Expression in snf2 mutant cells in YPD(1) 134 induced 0.11 0.100871919 0.011095911 45. Expression in snf2 mutant cells in minimal medium(1) 135 induced 0.737 0.142950896 0.10535481 46. Expression in swi1 mutant cells in YPD(1) 136 induced 0.916 0.108539955 0.099422599 47. Expression in swi1 mutant cells in minimal medium(1) 137 induced 0.571 0.114861837 0.065586109 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 induced 0.009 0.126517924 0.001138661 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 repressed 0.11 0.100346807 -0.011038149 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(2) 154 repressed 0.042 0.100915795 -0.004238463 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 repressed -0.056 0.102900019 0.005762401 54. Expression in response to overproduction of Ste5p(1) 159 repressed 0.097 0.121574869 -0.011792762 55. Expression in response to overproduction of Ste11p(1) 160 repressed 0.031 0.126354089 -0.003916977 56. Expression in response to overproduction of Ste12p(1) 161 repressed 0.08 0.125639003 -0.01005112 58. Expression in rst1 rst2 double deletion mutant cells(1) 163 repressed -0.013 0.111906273 0.001454782 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.129 0.112351568 0.014493352 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.033 0.155260922 0.00512361 62. Expression in response to osmotic shock in hog1 deletion mutant cells(1) 167 repressed 0.246 0.096397498 -0.023713785 66. Expression in ste5 deletion mutant cells(1) 171 induced -0.133 0.107474795 -0.014294148 71. Expression in bni1 deletion mutant cells(1) 176 induced -0.007 0.11082851 -0.0007758 73. Expression in response to overproduction of activated Pkc1p(1) 178 repressed 0.172 0.108663181 -0.018690067 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed 0.123 0.109507562 -0.01346943 77. Expression in tec1 deletion mutant cells(1) 183 induced -0.07 0.105142364 -0.007359965 78. Expression in kss1 deletion mutant cells(1) 184 induced 0.017 0.116059559 0.001973013 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.005 0.116154313 0.000580772 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed -0.032 0.153431665 0.004909813 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed 0.001 0.131203323 -0.000131203 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.135 0.118510549 0.015998924 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced -0.103 0.129848301 -0.013374375 92. Expression in cna1 cna2 double mutant cells(1) 198 repressed -0.075 0.109073469 0.00818051 95. Expression in response to 50ug/mL FK506(1) 201 induced 0.93 0.101494586 0.094389965 96. Heat-shock induced expression in med2 deleted cells(1) 202 repressed 0.358 0.101346154 -0.036281923 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 repressed 0 0.106746639 0 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 induced 0 0.125510642 0 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced 0 0.119596247 0 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.1150014 0 101. Young: Expression in spt3 deletion mutant(1) 207 repressed 0 0.103681385 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 bimodal 0 0.11248553 0 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0 0.117577483 0 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.136188387 0 105. Young: Expression in taf90 deletion mutant(1) 211 induced 0 0.098946975 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.157801531 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0 0.128489078 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0 0.12251727 0 110. Rosetta 2000: Expression in ade2 (haploid) deletion mutant (1) 229 induced -0.07 0.097444922 -0.006821145 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced -0.422 0.131271938 -0.055396758 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.046 0.142474328 0.006553819 113. Rosetta 2000: Expression in ald5 deletion mutant (1) 232 repressed -0.242 0.096756908 0.023415172 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.342 0.12931292 0.044225019 119. Rosetta 2000: Expression in arg5,6 deletion mutant (1) 238 repressed 0.349 0.10160801 -0.035461195 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 repressed 0.442 0.126182319 -0.055772585 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced 0.027 0.146142177 0.003945839 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced -0.023 0.097771191 -0.002248737 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.053 0.102842606 0.005450658 128. Rosetta 2000: Expression in bub3 (haploid **2) deletion mutant (1) 247 induced -0.166 0.110564787 -0.018353755 129. Rosetta 2000: Expression in bul1 deletion mutant (1) 248 induced 0.06 0.101721901 0.006103314 130. Rosetta 2000: Expression in cat8 deletion mutant (1) 249 induced -0.153 0.114539302 -0.017524513 131. Rosetta 2000: Expression in cbp2 deletion mutant (1) 250 induced -0.233 0.097757655 -0.022777534 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.791 0.124501027 0.098480312 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 bimodal 0.06 0.111555265 0.006693316 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 induced -2.176 0.125651606 -0.273417894 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced -0.173 0.099743745 -0.017255668 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced 0.136 0.114448749 0.01556503 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced 0.84 0.097535474 0.081929798 146. Rosetta 2000: Expression in dfr1 deletion mutant (1) 265 induced -0.066 0.109754481 -0.007243796 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed -0.033 0.107618559 0.003551412 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 repressed 0.355 0.099918316 -0.035471002 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed 0.16 0.105572255 -0.016891561 150. Rosetta 2000: Expression in dig2 deletion mutant (1) 269 induced 0.02 0.107701176 0.002154024 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.276 0.130408887 0.035992853 153. Rosetta 2000: Expression in ecm1 (**3) deletion mutant (1) 272 induced 0.299 0.118914768 0.035555516 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced 0.017 0.102515403 0.001742762 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 repressed 0.11 0.101621546 -0.01117837 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.319 0.151472181 0.048319626 164. Rosetta 2000: Expression in erg5 deletion mutant (1) 283 induced 0.01 0.100132562 0.001001326 166. Rosetta 2000: Expression in erp2 deletion mutant (1) 285 repressed -0.173 0.135763163 0.023487027 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced -1.412 0.131764376 -0.186051299 170. Rosetta 2000: Expression in fpr1 deletion mutant (1) 289 induced 0.163 0.098414395 0.016041546 172. Rosetta 2000: Expression in fus2 deletion mutant (1) 291 induced 0.053 0.099430078 0.005269794 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 repressed -0.003 0.099710605 0.000299132 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced 0.435 0.111091299 0.048324715 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced 0.292 0.131788181 0.038482149 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 1.109 0.112460792 0.124719018 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced -0.302 0.117366505 -0.035444684 187. Rosetta 2000: Expression in his1 deletion mutant (1) 306 induced 0.14 0.117105116 0.016394716 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 repressed 0.256 0.115786501 -0.029641344 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced -0.439 0.136126307 -0.059759449 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced -1.006 0.123502614 -0.12424363 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 bimodal -1.784 0.111382562 -0.19870649 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced -0.169 0.112918689 -0.019083258 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced 0.01 0.10759522 0.001075952 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed -0.066 0.104011389 0.006864752 208. Rosetta 2000: Expression in mnn1 deletion mutant (1) 327 induced -0.05 0.09879621 -0.00493981 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.405 0.131291542 0.053173075 213. Rosetta 2000: Expression in nrf1 deletion mutant (1) 332 induced -0.066 0.122906553 -0.008111833 214. Rosetta 2000: Expression in nta1 deletion mutant (1) 333 induced -0.11 0.095533514 -0.010508687 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 induced 0.149 0.131117905 0.019536568 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced 0.213 0.109033794 0.023224198 223. Rosetta 2000: Expression in pet127 deletion mutant (1) 342 induced -0.233 0.097195668 -0.022646591 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 induced -0.199 0.123304238 -0.024537543 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 induced 0.03 0.111437173 0.003343115 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal -0.027 0.121376494 -0.003277165 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.292 0.109238704 0.031897702 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced -6.644 0.123628174 -0.821385588 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed 0.063 0.105121826 -0.006622675 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed -0.223 0.110275392 0.024591412 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed -0.286 0.116516524 0.033323726 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.093 0.102403846 -0.009523558 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.352 0.132876214 -0.046772427 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced -0.365 0.137754854 -0.050280522 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.369 0.164041729 0.060531398 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced 0.086 0.102728249 0.008834629 256. Rosetta 2000: Expression in sap18 deletion mutant (1) 375 induced 0.186 0.105821042 0.019682714 257. Rosetta 2000: Expression in sap30 deletion mutant (1) 376 induced -0.428 0.102867812 -0.044027423 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.385 0.175957804 -0.067743755 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.133 0.109958925 0.014624537 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced -0.193 0.118565161 -0.022883076 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced -0.395 0.164741878 -0.065073042 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced 0.738 0.095670743 0.070605008 267. Rosetta 2000: Expression in sir3 deletion mutant (1) 386 induced 0.485 0.114756815 0.055657055 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed 0.668 0.100097087 -0.066864854 269. Rosetta 2000: Expression in sod1 (haploid) deletion mutant (1) 388 induced 0.531 0.108083458 0.057392316 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced 0.435 0.100955937 0.043915833 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0.133 0.134105676 0.017836055 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.428 0.112351568 0.048086471 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced -0.442 0.107474795 -0.047503859 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced 1.013 0.10285801 0.104195164 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.209 0.149214899 0.031185914 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced -0.249 0.115738891 -0.028818984 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 repressed 0.319 0.10336025 -0.03297192 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.166 0.17747106 0.029460196 291. Rosetta 2000: Expression in ubp8 deletion mutant (1) 410 induced -0.226 0.118827483 -0.026855011 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 induced 0.369 0.104821229 0.038679033 293. Rosetta 2000: Expression in ubr2 deletion mutant (1) 412 repressed -0.096 0.117245612 0.011255579 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced -0.01 0.171689694 -0.001716897 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.229 0.11931432 0.027322979 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 bimodal -0.262 0.104959391 -0.027499361 303. Rosetta 2000: Expression in yap3 deletion mutant (1) 422 repressed -1.309 0.097909821 0.128163955 308. Rosetta 2000: Expression in yel001c deletion mutant (1) 427 repressed -0.169 0.107478529 0.018163871 309. Rosetta 2000: Expression in yel008w deletion mutant (1) 428 repressed -0.266 0.101363891 0.026962795 310. Rosetta 2000: Expression in yel010w deletion mutant (1) 429 repressed -0.046 0.099777353 0.004589758 312. Rosetta 2000: Expression in yel028w deletion mutant (1) 431 repressed 0.09 0.105048544 -0.009454369 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced -0.272 0.095183906 -0.025890022 322. Rosetta 2000: Expression in yer034w deletion mutant (1) 441 induced 0.242 0.110825243 0.026819709 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.804 0.106401232 0.085546591 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced -0.033 0.118538088 -0.003911757 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 induced 0.671 0.098443801 0.066055791 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced 0.498 0.098184279 0.048895771 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.568 0.115098488 0.065375941 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.475 0.13251587 -0.062945038 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 repressed -0.003 0.110859783 0.000332579 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced 0.412 0.100737491 0.041503846 346. Rosetta 2000: Expression in yml005w deletion mutant (1) 465 induced -0.306 0.105019137 -0.032135856 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.229 0.116319548 -0.026637177 356. Rosetta 2000: Expression in ymr030w deletion mutant (1) 475 induced -0.349 0.100769698 -0.035168624 359. Rosetta 2000: Expression in ymr034c deletion mutant (1) 478 repressed -0.133 0.116801251 0.015534566 361. Rosetta 2000: Expression in ymr041c deletion mutant (1) 480 induced -0.203 0.109066001 -0.022140398 362. Rosetta 2000: Expression in ymr044w deletion mutant (1) 481 repressed -0.953 0.096650952 0.092108357 364. Rosetta 2000: Expression in ymr141c deletion mutant (1) 483 repressed -0.169 0.098742532 0.016687488 365. Rosetta 2000: Expression in ymr145c deletion mutant (1) 484 repressed -0.163 0.095398152 0.015549899 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced -0.425 0.131003547 -0.055676508 378. Rosetta 2000: Expression in yor021c deletion mutant (1) 497 induced -0.036 0.101390497 -0.003650058 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed -0.043 0.126286408 0.005430316 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed 0.09 0.111855396 -0.010066986 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.897 0.147037435 -0.131892579 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.329 0.11786081 0.038776207 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.02 0.144354929 0.002887099 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.389 0.113399925 0.044112571 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced -0.149 0.13092233 -0.019507427 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced 0.176 0.137469193 0.024194578 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed -0.149 0.1050014 0.015645209 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced -0.179 0.149052465 -0.026680391 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced 0.14 0.116912808 0.016367793 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.01 0.143299104 -0.001432991 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 1.066 0.113526419 0.121019163 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.538 0.115736557 0.062266268 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.525 0.123083925 0.06461906 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0.01 0.115182506 0.001151825 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0.19 0.11879761 -0.022571546 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 induced 0.09 0.11367205 0.010230485 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 repressed -0.06 0.101328417 0.006079705 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.04 0.121953417 0.004878137 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(7) 546 induced 0.31 0.116015683 0.035964862 Expression in PDR1-3 mutant(1) 555 repressed 0.379 0.135637136 -0.051406475 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.322 0.115877987 0.037312712 pho85 vs WT(1) 582 induced -0.415 0.098854089 -0.041024447 PHO81c vs WT exp2(1) 584 induced -0.152 0.161731236 -0.024583148 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced -0.315 0.172233476 -0.054253545 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced -0.277 0.147057506 -0.040734929 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced -0.438 0.151348954 -0.066290842 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.212 0.171548264 -0.036368232 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced 0.016 0.143251027 0.002292016 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced 0.341 0.101634149 0.034657245 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced -0.017 0.126714899 -0.002154153 437. Expression in wild type versus strain PH2 (ure2 deletion) under steady state conditions in YPD(1) 594 induced -4.992 0.115787435 -0.578010874 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced -0.077 0.137578883 -0.010593574 440. Expression in strain TS19-4c in response to 30 min 50 nM treatment with rapamycin in YPD(1) 597 induced -0.923 0.117343633 -0.108308174 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced -0.595 0.160693148 -0.095612423 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 0.111 0.14263863 0.015832888 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced 0.153 0.156347087 0.023921104 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced 0 0.13023245 0 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 induced 0 0.108318708 0 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed 0 0.120613798 0 465. Expression in rpd3 deletion(1) 622 induced -3.718 0.123871359 -0.460553714 467. Expression in sin3 deletion(1) 624 induced -3.49 0.130639003 -0.45593012 469. Expression in hda1 deletion(1) 626 induced -0.377 0.174666729 -0.065849357 470. Expression in hda1 deletion(1) 627 induced 0.402 0.111374627 0.0447726 471. Expression in sin3 deletion(1) 628 induced -0.941 0.114216766 -0.107477977 472. Expression in sap3 deletion(1) 629 induced -0.778 0.133286034 -0.103696535 473. Expression in ume6 deletion(1) 630 induced -0.142 0.15279733 -0.021697221 474. Expression in hda1 deletion(1) 631 induced -0.415 0.116762043 -0.048456248 475. Expression in hos2 deletion(1) 632 induced -0.167 0.108897965 -0.01818596 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(2) 635 induced -0.185 0.111369492 -0.020603356 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced -0.388 0.124300784 -0.048228704 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced -0.934 0.111950149 -0.10456144 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced -2.32 0.138967046 -0.322403547 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced 0 0.107738051 0 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced -1.528 0.132160661 -0.20194149 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -2.114 0.140626867 -0.297285197 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 induced -1.049 0.10382935 -0.108916988 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced 1.546 0.147962099 0.228749404 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced 1.055 0.117899085 0.124383535 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 induced 0 0.124358196 0 481. Expression in response to heat shock: 15,30,45,60,120 min(4) 655 repressed 0 0.115385549 0 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced 0 0.111607076 0 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0 0.115106889 0 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 induced 0 0.121852128 0 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 induced 0 0.116124907 0 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 0 0.102216673 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced 0 0.115365945 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 induced 0 0.095275392 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0 0.120481236 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0 0.109817494 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 0 0.114149552 0 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0 0.126046023 0 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0 0.128388256 0 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced 0 0.120534914 0 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 induced 0 0.120697816 0 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced 0 0.100726288 0 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 0 0.127097647 0 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 induced 0 0.110637603 0 486. Expression in response to NaCl: 15 30 45 60 120 min(4) 679 induced 0 0.099817494 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced 0 0.128570762 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 0 0.131325616 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 induced 0 0.118271098 0 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced -0.92 0.149455751 -0.137499291 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -2.18 0.165375747 -0.360519128 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced -1.06 0.171266337 -0.181542317 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced -0.86 0.159017924 -0.136755414 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced -1.06 0.16254481 -0.172297498 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced -0.56 0.171229462 -0.095888499 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 induced -0.32 0.114510829 -0.036643465 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 induced -0.71 0.103269698 -0.073321485 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.04 0.157318895 0.006292756 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed 0.07 0.151088499 -0.010576195 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.12 0.163240758 0.019588891 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.42 0.152676904 0.0641243 501. Brown enviromental changes :Heat Shock 030inutes hs-2(1) 699 induced 0.29 0.132872479 0.038533019 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed 0.28 0.110918596 -0.031057207 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed 0.14 0.112512136 -0.015751699 505. Brown enviromental changes :37C to 25C shock - 45 min(1) 703 repressed 0.24 0.117674571 -0.028241897 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 repressed -0.29 0.101853529 0.029537523 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced -0.67 0.160681012 -0.107656278 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced -0.71 0.161789115 -0.114870272 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced -0.54 0.164199029 -0.088667476 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.18 0.166158047 0.029908448 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced 0.3 0.170021004 0.051006301 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced -0.18 0.158804145 -0.028584746 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced -0.76 0.159032394 -0.120864619 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced -0.42 0.132244212 -0.055542569 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 induced -0.42 0.095712752 -0.040199356 520. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 5 minutes(1) 718 induced -0.32 0.113431665 -0.036298133 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced -0.74 0.156660754 -0.115928958 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed -0.32 0.124634989 0.039883196 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced 1.56 0.134185026 0.209328641 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 0.7 0.122574683 0.085802278 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0.12 0.130195575 0.015623469 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.12 0.151354089 0.018162491 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced 0.2 0.133575896 0.026715179 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.5 0.144231236 0.072115618 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced 0.07 0.129234037 0.009046383 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.2 0.119012323 0.023802465 534. Brown enviromental changes :1 mM Menadione (20 min) redo(1) 732 induced 0.82 0.107909821 0.088486053 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 induced 0.96 0.107612024 0.103307543 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced 0.84 0.121534261 0.102088779 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 induced 0.5 0.130907394 0.065453697 538. Brown enviromental changes :1 mM Menadione (80 min) redo(1) 736 induced 0.32 0.101476382 0.032472442 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 induced 0.54 0.095994679 0.051837127 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 0.81 0.102510269 0.083033318 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 repressed 0.62 0.102766057 -0.063714955 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed 0.39 0.126437173 -0.049310498 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed 0.54 0.131004014 -0.070742168 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 induced 0.01 0.121984223 0.001219842 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced 0.26 0.147233943 0.038280825 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced 0.21 0.102209671 0.021464031 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced 0.06 0.18514143 0.011108486 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.15 0.180753361 -0.027113004 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced -0.07 0.178914768 -0.012524034 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced -0.03 0.18207991 -0.005462397 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced -0.09 0.163458271 -0.014711244 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced 0.15 0.165162435 0.024774365 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced 0.16 0.149023058 0.023843689 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced 0.33 0.12867345 0.042462239 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.07 0.137036968 0.009592588 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced -0.23 0.139474421 -0.032079117 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced -0.02 0.111359223 -0.002227184 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced -0.14 0.118554892 -0.016597685 572. Brown enviromental changes :Hypo-osmotic shock - 5 min(1) 770 induced 0.06 0.109143484 0.006548609 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.1 0.129004388 -0.012900439 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed 0.19 0.115996079 -0.022039255 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed -0.01 0.148700056 0.001487001 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed 0.3 0.114661128 -0.034398338 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced 1.08 0.117815534 0.127240777 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.9 0.126741038 0.114066934 581. Brown enviromental changes :aa starv 4 h(1) 779 induced 0.36 0.099218633 0.035718708 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed 0.1 0.122602689 -0.012260269 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.06 0.120027539 0.007201652 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 induced -0.25 0.114567774 -0.028641944 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 induced -0.04 0.108924104 -0.004356964 589. Brown enviromental changes :Nitrogen Depletion 1 d(1) 787 induced -0.17 0.100566187 -0.017096252 591. Brown enviromental changes :Nitrogen Depletion 3 d(1) 789 induced -0.97 0.096389563 -0.093497876 592. Brown enviromental changes :Nitrogen Depletion 5 d(1) 790 induced -0.6 0.101336819 -0.060802091 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.52 0.131795183 0.068533495 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 0.33 0.159768484 0.0527236 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 0.34 0.166071229 0.056464218 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 1.04 0.155174104 0.161381068 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 1.19 0.140536781 0.16723877 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 1.07 0.132675971 0.141963289 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 0.85 0.140201643 0.119171397 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 0.98 0.139558439 0.13676727 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced -0.14 0.14351615 -0.020092261 612. Brown enviromental changes :YPD stationary phase 4 h ypd-1(1) 803 induced 0.09 0.119721807 0.010774963 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.04 0.118089059 -0.004723562 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.16 0.168855022 0.027016804 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.13 0.187870612 0.02442318 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.19 0.149875373 0.028476321 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 0.31 0.163454537 0.050670906 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced -0.27 0.153609503 -0.041474566 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced -0.94 0.14637276 -0.137590394 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced -1 0.150714619 -0.150714619 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced -0.78 0.135913928 -0.106012864 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced -1.06 0.14776419 -0.156630041 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced -0.4 0.133899832 -0.053559933 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced -0.3 0.144606983 -0.043382095 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 induced 0.06 0.161119305 0.009667158 628. Brown enviromental changes :DBY7286 + 0.3 mM H2O2 (20 min)(1) 819 induced 0.76 0.103345314 0.078542438 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced -0.6 0.133137136 -0.079882282 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced -0.2 0.110358943 -0.022071789 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.01 0.11370099 0.00113701 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced -0.07 0.126614544 -0.008863018 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.15 0.170096621 0.025514493 637. Brown enviromental changes :galactose car-1(1) 828 induced 0.33 0.108793409 0.035901825 638. Brown enviromental changes :glucose car-1(1) 829 repressed 0.43 0.131647218 -0.056608304 639. Brown enviromental changes :mannose car-1(1) 830 repressed 0.37 0.136102035 -0.050357753 641. Brown enviromental changes :sucrose car-1(1) 832 repressed 0.63 0.146700429 -0.092421271 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.31 0.14596994 0.045250681 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed 0.06 0.155213779 -0.009312827 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.06 0.136168783 -0.008170127 646. Brown enviromental changes :YP mannose vs reference pool car-2(1) 837 repressed 0.41 0.100533514 -0.041218741 647. Brown enviromental changes :YP raffinose vs reference pool car-2(1) 838 induced -0.59 0.101962752 -0.060158024 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed -0.08 0.159009522 0.012720762 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed 0.32 0.136520258 -0.043686482 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed 0.38 0.108782207 -0.041337239 653. Brown enviromental changes :37 deg growth ct-1(1) 844 induced -1.09 0.103685586 -0.113017289 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced 0.38 0.134028659 0.050930891 658. Brown enviromental changes :steady state 29 dec C ct-2(1) 849 repressed 0.16 0.107556012 -0.017208962 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced -0.01 0.101055825 -0.001010558 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced -0.29 0.134304985 -0.038948446 668. Expression in Rho0 containing rtg2 deletion vs Rho0(1) 856 induced 0 0.099866038 0 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced -0.111 0.167355302 -0.018576439 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 repressed -0.014 0.173119399 0.002423672 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 repressed 0.151 0.181627147 -0.027425699 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed 0.227 0.161757842 -0.03671903 681. Expression in response to 0.4M NaCl for 10 min in wild type(1) 869 induced 0.485 0.096435773 0.04677135 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 0.138 0.098280433 0.0135627 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 induced -0.13 0.110080751 -0.014310498 Rich Media 2% Glucose YPD-Average kss1 5mM aF, 30 min. 885 induced 0.03 0.118257562 0.003547727 ( trp- 2% Glucose-203508) wt vs fus3 (+Fus3K42R) 888 induced 1.22 0.101018484 0.12324255 Addition of 1M NaCl (90) 917 induced -0.5 0.183557226 -0.091778613 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -2.422 0.134039862 -0.324644545 DES460 + 0.02% MMS - 5 min 919 induced 0 0.096949216 0 DES460 + 0.02% MMS - 15 min 920 induced 0.16 0.107098581 0.017135773 DES460 + 0.02% MMS - 90 min 924 induced 0.04 0.099057599 0.003962304 DES459 (mec1-) + 0.02% MMS - 5 min 926 repressed -0.293 0.110598394 0.03240533 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed -0.434 0.106311613 0.04613924 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.18 0.11110857 0.019999543 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed -0.13 0.13259382 0.017237197 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.01 0.145254854 0.001452549 dun1- + 0.02% MMS - 90 min 934 repressed 0 0.127812733 0 dun1- + 0.02% MMS - 120 min 935 repressed 0.017 0.128680919 -0.002187576 wt_plus_gamma_5_min 936 induced 0.454 0.1409382 0.063985943 wt_plus_gamma_10_min 937 induced 0.375 0.166151979 0.062306992 wt_plus_gamma_20_min 938 induced 0.152 0.146945948 0.022335784 wt_plus_gamma_30_min 939 induced 0.358 0.112249347 0.040185266 DES460 (wt) - mock irradiation - 5 min 944 induced -0.168 0.127598954 -0.021436624 mec1_plus_gamma_5_min 948 induced 0.167 0.126357823 0.021101756 mec1_plus_gamma_10_min 949 induced 0.323 0.121937547 0.039385828 mec1_plus_gamma_30_min 951 repressed 0.326 0.127327296 -0.041508699 mec1_plus_gamma_45_min 952 repressed 0.259 0.124353996 -0.032207685 mec1_plus_gamma_60_min 953 repressed 0.306 0.149939787 -0.045881575 mec1_plus_gamma_90_min 954 repressed 0 0.139815627 0 DES459 (mec1) - mock irradiation - 5 min 956 induced 0.541 0.114173357 0.061767786 DES460 (wild type) + heat 20 min 960 bimodal -0.291 0.101362491 -0.029496485 DES459 (mec1) + heat 20 min 961 induced -0.276 0.105342606 -0.029074559 MHY1 (dun1) + heat 20 min 962 induced -0.493 0.098705657 -0.048661889 DES460 vs. DES460 YPD log phase control 963 repressed -0.287 0.095675411 0.027458843 DES460 + 0.02% MMS - 5 min 966 induced 0.416 0.139413742 0.057996117 100 microM CuSO4 30 min (B) 970 induced -0.17 0.103067588 -0.01752149 wt-gal 973 induced 0.837 0.123057319 0.102998976 wt+gal 974 repressed 0.299 0.096958551 -0.028990607 gal1+gal 975 induced -0.99 0.101739171 -0.100721779 gal3+gal 977 induced -0.329 0.170066748 -0.05595196 gal4+gal 978 induced -1.538 0.129290982 -0.19884953 gal7+gal 981 induced -0.987 0.149584111 -0.147639518 gal10+gal 982 induced -0.256 0.160395351 -0.04106121 gal1-gal 984 induced -2.528 0.115955937 -0.293136609 gal2-gal 985 induced -0.744 0.142558346 -0.106063409 gal3-gal 986 induced -0.751 0.147072442 -0.110451404 gal4-gal 987 induced -0.887 0.181433439 -0.160931461 gal5-gal 988 induced -0.183 0.122826736 -0.022477293 gal6-gal 989 induced -1.09 0.124156553 -0.135330643 gal7-gal 990 induced -0.548 0.106809186 -0.058531434 gal10-gal 991 induced -0.282 0.162910754 -0.045940833 gal1gal10+gal 993 induced -0.04 0.164108476 -0.006564339 gal2gal80-gal 994 repressed 0.422 0.13102922 -0.055294331 gal4gal80-gal 995 repressed 0.01 0.114777819 -0.001147778 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced -0.25 0.115255788 -0.028813947 BY4741 GAL t=90min vs. t=0 (YT00262) 998 repressed 0.59 0.130679612 -0.077100971 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced -0.29 0.155014937 -0.044954332 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed 0.53 0.105316001 -0.05581748 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0.7 0.149162621 -0.104413835 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0.15 0.151085698 -0.022662855 YAL038W 1010 induced 0.11749 0.115795836 0.013604853 YBL020W 1013 induced -0.083145 0.133766804 -0.011122041 YBR002C 1016 induced -0.27635 0.108190347 -0.029898402 YBR088C 1018 induced 0.16052 0.11310773 0.018156053 YBR142W 1019 induced -0.053414 0.105476568 -0.005633925 YBR143C 1020 induced 0.084882 0.126747573 0.010758587 YBR196C 1024 induced 0.17899 0.102206404 0.018293924 YCR013C 1028 induced 0.033395 0.110682879 0.003696255 YCR042C 1029 induced 0.053834 0.124756348 0.006716133 YDL047W 1032 induced 0.044453 0.126322816 0.005615428 YDL055C 1033 induced 0.077465 0.143115665 0.011086455 YDL132W 1037 induced -0.015558 0.120997013 -0.001882472 YDR047W 1039 induced -0.062872 0.111476848 -0.007008772 YDR062W 1040 induced 0.052063 0.120273058 0.006261776 YDR091C 1041 induced -0.067694 0.114631721 -0.00775988 YDR141C 1042 induced -0.069504 0.155005601 -0.010773509 YDR464W 1046 induced -0.17646 0.096702763 -0.01706417 YDR489W 1047 induced -0.013461 0.132246546 -0.001780171 YER023W 1049 induced -0.02355 0.103386389 -0.002434749 YER172C 1050 induced 0.13503 0.126816187 0.01712399 YFL005W 1051 induced -0.024719 0.106083831 -0.002622286 YFL024C 1052 induced 0.056642 0.130342606 0.007382866 YGL116W 1055 induced 0.019941 0.104476755 0.002083371 YGL245W 1056 induced 0.04084 0.096356889 0.003935215 YGR048W 1057 induced 0.043616 0.129136016 0.005632396 YGR060W 1058 induced 0.36407 0.097272218 0.035413896 YGR280C 1064 induced 0.10957 0.100560119 0.011018372 YHR090C 1068 induced 0.12493 0.112916822 0.014106699 YHR118C 1069 induced -0.14303 0.11743792 -0.016797146 YHR188C 1070 induced 0.068929 0.108733196 0.00749487 YIL003W 1072 induced 0.1754 0.108943708 0.019108726 YIR022W 1076 induced 0.0078188 0.100519044 0.000785938 YJL011C 1078 induced 0.14972 0.099445015 0.014888908 YJL081C 1082 induced 0.036166 0.120012603 0.004340376 YJL091C 1083 induced -0.088956 0.108574029 -0.009658311 YJL194W 1084 induced -0.026552 0.111747106 -0.002967109 YKL018W 1088 induced 0.094084 0.09988891 0.009397948 YKL052C 1089 induced -0.029123 0.113314507 -0.003300058 YKR079C 1094 induced 0.19449 0.140764563 0.0273773 YKR086W 1095 induced -0.06408 0.117805732 -0.007548991 YLR076C 1101 induced -0.096802 0.176710698 -0.017105949 YLR086W 1102 induced 0.10333 0.12842373 0.013270024 YLR101C 1103 induced -0.1588 0.141604276 -0.022486759 YLR163C 1105 induced -0.025246 0.134180825 -0.003387529 YLR196W 1106 induced -0.088192 0.114934186 -0.010136276 YLR291C 1109 induced 0.30192 0.130273525 0.039332183 YLR359W 1112 induced -0.0036979 0.125694548 -0.000464806 YLR378C 1113 induced 0.21384 0.125407487 0.026817137 YLR440C 1115 induced 0.079487 0.133590366 0.010618697 YLR457C 1116 induced -0.037638 0.142147125 -0.005350133 YLR459W 1117 induced 0.17938 0.14601335 0.026191875 YML031W 1118 induced -0.037454 0.129618652 -0.004854737 YML046W 1119 induced 0.24116 0.126757375 0.030568809 YMR001C 1121 induced 0.193 0.101978155 0.019681784 YMR043W 1122 induced -0.21087 0.115369679 -0.024328004 YMR076C 1123 induced -0.16754 0.119668129 -0.020049198 YMR079W 1124 induced 0.088654 0.128974048 0.011434065 YMR200W 1126 induced -0.0029423 0.113486744 -0.000333912 YMR239C 1128 induced -0.1103 0.110777633 -0.012218773 YNL150W 1132 induced 0.0475 0.118658514 0.005636279 YNL158W 1133 induced -0.019319 0.133572162 -0.002580481 YNL182C 1134 induced 0.21154 0.128162808 0.02711156 YNL272C 1136 induced -0.024436 0.117298357 -0.002866303 YNR035C 1138 induced -0.016939 0.130859317 -0.002216626 YNR043W 1139 induced -0.028011 0.111778379 -0.003131024 YNR053C 1140 induced -0.02814 0.118109597 -0.003323604 YOR169C 1154 induced -0.015479 0.115916262 -0.001794268 YOR204W 1155 induced 0.064421 0.125079817 0.008057767 YOR232W 1157 induced 0.054638 0.122878081 0.006713813 YOR236W 1158 induced -0.015797 0.103676251 -0.001637774 YOR259C 1159 induced -0.012973 0.097809466 -0.001268882 YOR261C 1160 induced 0.15135 0.118908234 0.017996761 YOR335C 1164 induced -0.23109 0.133308439 -0.030806247 YPL010W 1166 induced -0.09905 0.132337099 -0.01310799 YPL063W 1167 induced 0.087332 0.152440254 0.013312912 YPL076W 1168 induced 0.042261 0.11168596 0.00471996 YPL093W 1169 induced -0.10488 0.110715086 -0.011611798 YPL231W 1173 induced -0.0050518 0.108433999 -0.000547787 YPL243W 1174 induced 0.1534 0.136704164 0.020970419 YPR105C 1176 induced 0.14052 0.105917196 0.014883484 YPR169W 1178 induced -0.074372 0.148286034 -0.011028329 YPR178W 1179 induced 0.26478 0.134242438 0.035544713 YPR180W 1180 induced 0.043216 0.096714432 0.004179611 YBR029C 1182 induced -0.019013 0.115898525 -0.002203579 YDR054C 1183 induced 0.096894 0.099914582 0.009681123 YDR412W 1186 induced -0.0011337 0.111447442 -0.000126348 YER006W 1188 induced -0.14832 0.107401512 -0.015929792 YFR037C 1190 induced 0.0071453 0.132645164 0.000947789 YGL073W 1191 induced -0.01415 0.121868932 -0.001724445 YGL122C 1192 induced 0.0011445 0.122079444 0.00013972 YGR198W 1196 induced 0.089728 0.159420743 0.014304504 YHR205W 1201 induced -0.022839 0.105753827 -0.002415312 YJL097W 1202 induced 0.057334 0.148472274 0.008512509 YKL033W 1204 induced 0.071183 0.105983943 0.007544255 YKL082C 1205 induced -0.025178 0.096161314 -0.00242115 YKL210W 1206 induced 0.12597 0.103715459 0.013065036 YLR008C 1208 induced 0.014884 0.099038462 0.001474088 YLR106C 1209 induced -0.065427 0.099309653 -0.006497533 YLR229C 1211 induced -0.098308 0.123489544 -0.01214001 YMR235C 1212 induced 0.052563 0.101553398 0.005337951 YNL149C 1213 induced -0.065062 0.113476008 -0.007382976 YNL222W 1214 induced 0.062554 0.109498693 0.006849581 YNL245C 1215 induced 0.080305 0.145414488 0.01167751 YNL258C 1216 induced -0.0019608 0.110885922 -0.000217425 YOR077W 1220 induced 0.027874 0.123774739 0.003450097 ADR1OE+ 1224 induced 0.1373035 0.121897872 0.016737004 BYE1OE+ 1225 induced 0.0687065 0.117641897 0.008082763 CRZ1OE+ 1227 induced -0.0180275 0.133291636 -0.002402915 CUP2OE+ 1229 repressed -0.2165135 0.120624066 0.026116739 GAT4OE+ 1232 induced -0.1446455 0.147916822 -0.021395503 GIS1OE+ 1234 induced -0.0340585 0.106601942 -0.003630702 HAC1OE+ 1237 repressed 0.0032135 0.122510736 -0.000393688 HSF1OE+ 1240 repressed 0.1510595 0.103636576 -0.015655289 MBP1OE+ 1242 induced 0.260402 0.116450709 0.030323998 MGA1OE+ 1245 induced 0.1765565 0.123560493 0.021815408 MIG1OE+ 1246 induced 0.136808 0.111268671 0.015222444 MSN4OE+ 1249 induced 0.08386 0.097130321 0.008145349 RFX1OE+ 1253 induced 0.173515 0.137701643 0.023893301 ROX1OE+ 1256 induced 0.0121965 0.11904733 0.001451961 SFP1OE+ 1258 repressed -0.038236 0.121490385 0.004645306 SIP4OE+ 1259 induced 0.0501215 0.0998441 0.005004336 SKN7OE+ 1260 induced 0.0136115 0.203299104 0.002767206 SOK2OE+ 1261 bimodal 0.0711 0.131419903 0.009343955 SPS18OE+ 1262 induced 0.042349 0.105737024 0.004477857 STP2OE+ 1265 induced 0.013727 0.10767177 0.00147801 SUT1OE+ 1267 repressed 0.1385665 0.133473208 -0.018494915 SWI4OE+ 1268 induced 0.1747975 0.127577483 0.022300225 TOS8OE+ 1269 induced -0.03432 0.148117532 -0.005083394 UPC2OE+ 1270 induced 0.042679 0.12665842 0.005405655 XBP1OE+ 1271 induced -0.1660475 0.145002334 -0.024077275 YHP1OE+ 1273 induced 0.006355 0.139389937 0.000885823 YOX1OE+ 1274 induced -0.1197635 0.146006348 -0.017486231 WT/cst6+ 1282 induced -0.0609485 0.109036128 -0.006645588 WT/gis1+ 1288 induced 0.138695 0.106809186 0.0148139 WT/mbp1+ 1295 induced 0.096097 0.115854649 0.011133284 WT/sok2+ 1312 induced 0.005111 0.155463032 0.000794572 WT/zap1+ 1328 repressed 0.0253755 0.099125747 -0.002515365