Rgt1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 induced -0.49 0.0996424570575056 -0.0488248039581777 0.00931655640861402 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed 0.05 0.103780806572069 -0.00518904032860345 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed -0.29 0.103707057505601 0.0300750466766243 6. Expression during the cell cycle (cdc15 arrest and release)(7) 30 induced -0.18 0.095390216579537 -0.0171702389843167 6. Expression during the cell cycle (cdc15 arrest and release)(8) 31 induced 0.07 0.102691374159821 0.00718839619118747 6. Expression during the cell cycle (cdc15 arrest and release)(9) 32 induced 0.36 0.102966766243465 0.0370680358476474 7. Expression during the cell Cycle (cdc28)(2) 49 repressed -0.39 0.10010642270351 0.0390415048543689 7. Expression during the cell Cycle (cdc28)(9) 56 induced 0.24 0.10362070575056 0.0248689693801344 7. Expression during the cell Cycle (cdc28)(10) 57 induced 0.3 0.136704163554892 0.0410112490664676 8. Expression during the cell cycle (cell size selection and release)(7) 71 repressed -0.12 0.116702296489918 0.0140042755787902 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.19 0.135478435399552 0.0257409027259149 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced 0.02 0.0977002427184466 0.00195400485436893 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced 0.02 0.098871359223301 0.00197742718446602 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(2) 87 repressed -0.322 0.0986809185959671 0.0317752557879014 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -0.714 0.129617251680358 0.0925467176997756 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced 0.287 0.0995729088872293 0.0285774248506348 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 bimodal 0.604 0.127934559372666 0.0772724738610903 12. Expression in tup1-deleted cells(1) 96 induced -0.286 0.172434185959671 -0.0493161771844659 18. parental strain versus evolved strain 3(1) 102 bimodal -0.17 0.106292942494399 -0.0180698002240478 24. Fink: Expression in diploid ste12/ste12 deletion mutant(1) 108 repressed 0 0.098320575056012 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.100561519790889 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.134283513816281 0 28. Young: Expression in srb4 mutant(1) 112 repressed 0 0.122277352501867 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.128605769230769 0 32. Young: Expression in swi2 mutant(1) 116 repressed 0 0.128223487677371 0 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.105498039581777 0 34. Young: Expression in taf17 mutant(1) 118 repressed 0 0.11475354742345 0 35. Young: Expression in tfa1 mutant(1) 119 repressed -0.605 0.124536967886482 0.0753448655713216 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.114651325616131 0 37. Young: Expression in gcn5 mutant(1) 121 repressed 0 0.104995332337565 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(2) 123 induced 0 0.109496359223301 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(7) 128 repressed 0.832 0.117222740851382 -0.0975293203883498 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.157523805078417 0 45. Expression in snf2 mutant cells in minimal medium(1) 135 repressed 0.252 0.121903005974608 -0.0307195575056012 46. Expression in swi1 mutant cells in YPD(1) 136 repressed -0.075 0.0962514002987304 0.00721885502240478 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed 0.322 0.11787574682599 -0.0379559904779688 56. Expression in response to overproduction of Ste12p(1) 161 repressed -0.057 0.0996531926811053 0.005680231982823 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 repressed -0.013 0.108638909634055 0.00141230582524271 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.02 0.118459671396565 0.0023691934279313 65. Expression in ste4 deletion mutant cells(1) 170 induced -0.038 0.118637509335325 -0.00450822535474235 71. Expression in bni1 deletion mutant cells(1) 176 induced -0.003 0.111900672143391 -0.000335702016430173 73. Expression in response to overproduction of activated Pkc1p(1) 178 repressed 0.159 0.105039208364451 -0.0167012341299477 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed -0.105 0.11418782673637 0.0119897218073188 78. Expression in kss1 deletion mutant cells(1) 184 repressed -0.013 0.111316280806572 0.00144711165048544 79. Expression in fus3 deletion mutant cells(1) 185 induced -0.081 0.127199869305452 -0.0103031894137416 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.212 0.09817214339059 0.0208124943988051 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced 0.081 0.120815440627334 0.00978605069081405 88. Expression in response to DNA damage by MMS(1) 194 repressed 0 0.112420182972367 0 94. Expression in response to 1ug/mL FK506(1) 200 induced -0.138 0.10853855489171 -0.014978320575056 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.139534634055265 0 101. Young: Expression in spt3 deletion mutant(1) 207 repressed 0 0.113806945481703 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 repressed 0 0.135596994025392 0 103. Young: Expression in taf60 deletion mutant(1) 209 bimodal 0 0.100747759522031 0 105. Young: Expression in taf90 deletion mutant(1) 211 repressed 0 0.130250653472741 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0.54 0.125863984316654 0.0679665515309932 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 repressed 0.21 0.109761949215833 -0.0230500093353249 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(4) 216 repressed 0.58 0.110336538461538 -0.063995192307692 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(8) 220 repressed -0.94 0.121010082150859 0.113749477221807 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.09 0.143437266616878 0.012909353995519 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed -0.01 0.100243651979089 0.00100243651979089 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced -0.153 0.113163274831964 -0.0173139810492905 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal 0.007 0.123991318147872 0.000867939227035104 142. Rosetta 2000: Expression in cue1 deletion mutant (1) 261 induced 0.027 0.0990146564600448 0.00267339572442121 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced -0.093 0.0963097460791636 -0.00895680638536221 150. Rosetta 2000: Expression in dig2 deletion mutant (1) 269 induced -0.053 0.103102595220314 -0.00546443754667664 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.256 0.0997255414488424 0.0255297386109037 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced -0.269 0.127199869305452 -0.0342167648431666 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 repressed -0.036 0.108517083644511 0.0039066150112024 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced -0.445 0.111533793876027 -0.049632538274832 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced 0.322 0.0968745332337565 0.0311935997012696 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced -0.086 0.105556385362211 -0.00907784914115015 198. Rosetta 2000: Expression in jnm1 deletion mutant (1) 317 induced 0.209 0.106314413741598 0.022219712471994 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced -0.435 0.103559092606423 -0.045048205283794 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced 0.083 0.0972456123973114 0.00807138582897685 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed -0.04 0.125600261389096 0.00502401045556384 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed -0.073 0.12352641896938 0.00901742858476474 214. Rosetta 2000: Expression in nta1 deletion mutant (1) 333 induced 0.013 0.095610997012696 0.00124294296116505 217. Rosetta 2000: Expression in pau2 deletion mutant (1) 336 repressed -0.216 0.106969753547423 0.0231054667662434 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 repressed -0.279 0.106997759522031 0.0298523749066467 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 repressed -0.326 0.103153005974608 0.0336278799477222 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.057 0.105430825242718 0.00600955703883493 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.103 0.124667195668409 0.0128407211538461 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced 0.046 0.111158513816281 0.00511329163554893 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced 0.003 0.129708737864078 0.000389126213592234 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.06 0.0988937640029873 0.00593362584017924 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced -0.389 0.104114544436146 -0.0405005577856608 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 repressed 0.475 0.103380787901419 -0.049105874253174 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed -0.027 0.103538088125467 0.00279552837938761 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0 0.127386109036594 0 280. Rosetta 2000: Expression in ste4 (haploid) deletion mutant (1) 399 induced -0.126 0.118637509335325 -0.014948326176251 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced -0.136 0.102564413741598 -0.0139487602688573 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.033 0.114782953696789 0.00378783747199404 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.023 0.101242531740105 0.00232857823002242 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 repressed 0.066 0.102256814787155 -0.00674894977595223 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced -0.04 0.177614824495892 -0.00710459297983568 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced -0.017 0.12014002987304 -0.00204238050784168 303. Rosetta 2000: Expression in yap3 deletion mutant (1) 422 induced -0.133 0.100059746079164 -0.0133079462285288 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced 0.043 0.118419529499627 0.00509203976848396 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 bimodal -0.033 0.113043315907394 -0.003730429424944 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.073 0.105844380134429 -0.00772663974981332 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 repressed -0.319 0.0970355675877521 0.0309543460604929 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed 0.046 0.103525952203137 -0.0047621938013443 368. Rosetta 2000: Expression in ymr237w deletion mutant (1) 487 repressed -0.007 0.0959634055265123 0.000671743838685586 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced -0.066 0.109444081404033 -0.00722330937266618 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced 0.07 0.114568241224795 0.00801977688573565 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.266 0.101925410754294 0.0271121592606422 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.226 0.120148431665422 0.0271535455563854 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0.017 0.11681432038835 0.00198584344660195 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.07 0.106266803584765 -0.00743867625093355 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0.3 0.110552651232263 0.0331657953696789 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 repressed -0.11 0.122317961165049 0.0134549757281554 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed -0.2 0.134749346527259 0.0269498693054518 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 induced -0.01 0.100070481702763 -0.00100070481702763 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 induced 0.22 0.100372012696042 0.0220818427931292 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 bimodal 0.05 0.112575616131441 0.00562878080657205 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 repressed -0.2 0.111935212845407 0.0223870425690814 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.23 0.10323002240478 0.0237429051530994 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(7) 546 induced 0.14 0.102974701269604 0.0144164581777446 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced 0.21 0.136629480955937 0.0286921910007468 Expression in PDR1-3 mutant(1) 555 repressed 0.465 0.100310866318148 -0.0466445528379388 Low-Pi vs High-Pi in WT (NBW7) exp2(1) 578 induced 0.111 0.102634428678118 0.0113924215832711 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.506 0.102518670649739 0.0518744473487679 PHO81c vs WT exp2(1) 584 induced -1.059 0.0979378267363704 -0.103716158513816 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 0 0.117748786407767 0 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 bimodal 0.158 0.117894417475728 0.018627317961165 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0 0.113577763256161 0 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 repressed 0.523 0.109332524271845 -0.0571809101941749 445. Expression in response to 0.1% MMS for 60 min (average of 3 experiments)(1) 602 repressed 0 0.119550504107543 0 448. Expression in response to 0.1% MMS for 60 min(1) 605 repressed 0 0.10727641896938 0 449. Expression in response to 0.1% MMS for 60 min(1) 606 repressed 0 0.139974794622853 0 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 repressed 0 0.115708084391337 0 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 repressed 0 0.118082991038088 0 457. Expression of G1 arrested cells (with alpha factor) in response to 0.1% MMS for 60 min(1) 614 repressed 0 0.108711725168036 0 458. Expression of S arrested cells (with hydroxyurea) in response to 0.1% MMS for 60 min(1) 615 repressed 0 0.157175130694548 0 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed 0.714 0.147624159820762 -0.105403650112024 461. Expression of rpn4 deletion in response to 0.1% MMS for 60 min(1) 618 repressed -0.786 0.129573375653473 0.10184467326363 463. Expression in response to 0.1% MMS for 60 min(1) 620 repressed 0 0.116532393577296 0 464. Expression in response to 0.2% MMS for 60 min(1) 621 repressed 0 0.138194081404033 0 468. Expression in sin33 deletion(1) 625 repressed 0 0.104352595220314 0 469. Expression in hda1 deletion(1) 626 induced 0 0.14347787528006 0 474. Expression in hda1 deletion(1) 631 induced -1 0.108781740104556 -0.108781740104556 475. Expression in hos2 deletion(1) 632 induced -0.724 0.10038928304705 -0.0726818409260642 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(2) 635 induced -0.03 0.0999752613890963 -0.00299925784167289 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced 0.023 0.10209998132935 0.00234829957057505 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced -0.167 0.109534634055265 -0.0182922838872293 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 repressed 1.589 0.1170285660941 -0.185958391523525 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced 1.119 0.111264002987304 0.124504419342793 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(3) 645 repressed 0 0.0992508401792382 0 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 repressed 0 0.116809185959671 0 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed 1.044 0.129066000746826 -0.134744904779686 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(5) 651 repressed 0 0.107084578043316 0 481. Expression in response to heat shock: 15,30,45,60,120 min(3) 654 repressed 0.824 0.0981632748319642 -0.0808865384615385 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 repressed -0.487 0.104153286034354 0.0507226502987304 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 repressed -0.487 0.132434185959671 0.0644954485623598 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0.02 0.120546583271098 0.00241093166542196 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 0.79 0.0992503734129948 0.0784077949962659 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 repressed 0.27 0.103179611650485 -0.027858495145631 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed 0 0.0981735436893204 0 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.23 0.107514936519791 0.0247284353995519 506. Brown enviromental changes :37C to 25C shock - 60 min(1) 704 induced 0 0.0973730395817774 0 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced 0.5 0.135168502613891 0.0675842513069455 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 repressed 0.61 0.101161314413742 -0.0617084017923826 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.68 0.0978113330843913 0.0665117064973861 515. Brown enviromental changes :29C to 33C - 30 minutes(1) 713 repressed 0.08 0.10485997012696 -0.0083887976101568 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 0 0.104377333831217 0 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced -0.42 0.101529126213592 -0.0426422330097086 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed -0.17 0.100005601194922 0.0170009522031367 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 0.16 0.0962868745332338 0.0154058999253174 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.43 0.107844473487677 0.0463731235997011 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced -0.6 0.101854462285288 -0.0611126773711728 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 induced -0.58 0.115881721433906 -0.0672113984316655 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 repressed 0.15 0.104503360716953 -0.015675504107543 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced 0.14 0.114428211351755 0.0160199495892457 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.03 0.131939413741598 -0.00395818241224794 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.01 0.135676344286781 -0.00135676344286781 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced 0.04 0.106728435399552 0.00426913741598208 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced 0.26 0.106237397311426 0.0276217233009708 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.01 0.101124906646751 0.00101124906646751 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced 0.11 0.11481002613891 0.0126291028752801 572. Brown enviromental changes :Hypo-osmotic shock - 5 min(1) 770 induced 0.07 0.0959031926811053 0.00671322348767737 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.39 0.0986846527259149 0.0384870145631068 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 repressed 0.42 0.0968385922330097 -0.0406722087378641 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed -0.36 0.154566374159821 0.0556438946975356 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.69 0.119049197162061 0.0821439460418221 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 repressed 0.44 0.115349141150112 -0.0507536221060493 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 1.23 0.101572068707991 0.124933644510829 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 bimodal 0.96 0.113208084391337 0.108679761015684 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 bimodal 0.59 0.116130041075429 0.0685167242345031 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 0.82 0.101039488424197 0.0828523805078415 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 0.64 0.0993969380134429 0.0636140403286035 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.2 0.0957972367438387 -0.0191594473487677 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.95 0.135100821508588 0.128345780433159 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 bimodal 0.33 0.135233849887976 0.0446271704630321 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 bimodal 0.86 0.113858756534727 0.0979185306198652 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 bimodal 0.77 0.139316187453323 0.107273464339059 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 1.49 0.108216486183719 0.161242564413741 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 1.42 0.113718726661688 0.161480591859597 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 bimodal 1.26 0.105974141150112 0.133527417849141 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 repressed 1.3 0.0991406833457804 -0.128882888349515 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 repressed 1.33 0.111865197908887 -0.14878071321882 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 repressed -0.09 0.105131161314414 0.00946180451829726 624. Brown enviromental changes :DBYmsn2-4- 37degree heat - 20 min(1) 815 repressed -0.06 0.114025392083645 0.0068415235250187 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 repressed 0.02 0.115111557132188 -0.00230223114264376 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal 0 0.100523244958925 0 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced 0.52 0.101646751306945 0.0528563106796114 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.76 0.0990818707991038 0.0753022218073189 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced -0.07 0.0966920276325616 -0.00676844193427931 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -0.38 0.0994202763256161 0.0377797050037341 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 induced -0.3 0.102013629574309 -0.0306040888722927 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 induced 0.1 0.100776699029126 0.0100776699029126 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0.08 0.107917755787901 0.00863342046303208 668. Expression in Rho0 containing rtg2 deletion vs Rho0(1) 856 induced 0 0.0991789581777446 0 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 repressed -0.585 0.0967022964899178 0.0565708434466019 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.971 0.113558159073936 0.110264972460792 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 bimodal 0.934 0.116488984316654 0.108800711351755 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 bimodal -0.475 0.121418969380134 -0.0576740104555636 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 induced -0.356 0.12216859596714 -0.0434920201643018 (Rich Media 2% Glucose YPD-185769) wt 5mM aF, 30 min. 876 induced 0.08 0.0979294249439881 0.00783435399551905 Addition of 1M NaCl (10) 915 induced -0.94 0.109980395817774 -0.103381572068708 Addition of 1M NaCl (90) 917 bimodal 1.59 0.122034167289022 0.194034325989545 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -1.384 0.0971069828230022 -0.134396064227035 DES460 + 0.02% MMS - 120 min 925 repressed -0.345 0.105409820761763 0.0363663881628082 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.811 0.108466672890217 0.087966471713966 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed -1.045 0.104707804331591 0.109419655526513 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.771 0.105761295743092 0.0815419590179239 wt_plus_gamma_5_min 936 induced -0.146 0.101018017176998 -0.0147486305078417 wt_plus_gamma_10_min 937 induced 0.135 0.120392083644511 0.016252931292009 wt_plus_gamma_20_min 938 repressed -0.057 0.11189927184466 0.00637825849514562 wt_plus_gamma_30_min 939 repressed -0.457 0.139691467513069 0.0638390006534725 wt_plus_gamma_60_min 941 repressed -0.298 0.103123132935026 0.0307306936146377 DES460 (wt) - mock irradiation - 5 min 944 induced -0.009 0.102214805825243 -0.000919933252427187 mec1_plus_gamma_20_min 950 repressed -0.24 0.111866598207618 0.0268479835698283 mec1_plus_gamma_30_min 951 repressed -0.299 0.120816374159821 0.0361240958737865 mec1_plus_gamma_45_min 952 repressed -0.824 0.115394884241972 0.0950853846153849 mec1_plus_gamma_60_min 953 repressed -0.584 0.125017270351008 0.0730100858849887 mec1_plus_gamma_90_min 954 repressed 0.75 0.119605115758028 -0.089703836818521 mec1_plus_gamma_120_min 955 repressed 0.093 0.0957729648991785 -0.0089068857356236 MHY1 (dun1) + heat 20 min 962 repressed 0.084 0.1027963965646 -0.0086348973114264 gal1+gal 975 repressed -0.013 0.111574402539208 0.0014504672330097 gal3+gal 977 induced 0.419 0.12968073188947 0.0543362266616879 gal7+gal 981 induced 0.625 0.134812359970127 0.0842577249813294 gal10+gal 982 induced 0.126 0.141494118745332 0.0178282589619118 gal2-gal 985 induced -0.073 0.11870145631068 -0.00866520631067964 gal3-gal 986 induced 0.804 0.104505227781927 0.0840222031366693 gal4-gal 987 induced -0.259 0.115189040328603 -0.0298339614451082 gal5-gal 988 induced 0.179 0.101437640029873 0.0181573375653473 gal6-gal 989 induced 0.415 0.0998977781926811 0.0414575779499627 gal7-gal 990 repressed 0.478 0.104808159073936 -0.0500983000373414 gal10-gal 991 induced 0.787 0.118831217326363 0.0935201680358477 gal80-gal 992 repressed 0 0.099865571321882 0 gal1gal10+gal 993 induced 0.502 0.105840179238237 0.053131769977595 BY4741 GAL t=30min vs. t=0 (YT00261) 996 repressed 0 0.118772404779686 0 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced -0.23 0.128335978342046 -0.0295172750186706 BY4741 GAL t=90min vs. t=0 (YT00262) 998 repressed 0.07 0.0997283420463032 -0.00698098394324122 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed 0 0.136825056011949 0 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed 0 0.107298823749066 0 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced -0.15 0.121424103808813 -0.0182136155713219 sfp1::GALSFP1 t=50min GAL vs. t=0 RAFF (YT00265) 1005 induced 0 0.107644697535474 0 sfp1::GALSFP1 t=90min GAL vs. t=0 RAFF (YT00266) 1007 induced -0.25 0.104016990291262 -0.0260042475728155 YAL038W 1010 induced 0.087133 0.114490291262136 0.0099758825485437 YBL020W 1013 induced -0.043197 0.108161874533234 -0.00467226849421211 YBL084C 1015 induced 0.060546 0.114202296489918 0.00691449224327858 YBR088C 1018 induced 0.098666 0.113542289021658 0.0112027634886109 YBR142W 1019 induced -0.054442 0.100558719193428 -0.00547461779032861 YBR143C 1020 induced -0.23687 0.0997960231516057 -0.0236386840039208 YDL047W 1032 induced -0.031811 0.127137322628827 -0.00404436537014562 YDL060W 1034 induced 0.0096055 0.0993474607916355 0.000954282034634055 YDL132W 1037 induced -0.015514 0.0995575056011949 -0.00154453514189694 YDR047W 1039 induced 0.11169 0.103876026885736 0.0116019134428679 YDR489W 1047 induced 0.26111 0.104946321882001 0.0274025341066093 YFL005W 1051 induced 0.047048 0.0951941747572815 0.00447869553398058 YFL024C 1052 induced 0.65462 0.11372712845407 0.0744480528286033 YJL081C 1082 induced 0.18871 0.125183439133682 0.0236233667989171 YKR079C 1094 induced 0.08002 0.11481282673637 0.00918732239544433 YKR086W 1095 induced 0.1061 0.0985404219566841 0.0104551387696042 YLR076C 1101 induced 0.085472 0.120016336818521 0.0102580363405526 YLR086W 1102 induced 0.043341 0.0975280059746079 0.00422696130694548 YLR101C 1103 induced 0.075079 0.097271284540702 0.00730303077203137 YLR163C 1105 induced 0.062576 0.115016803584765 0.00719729150112026 YLR291C 1109 induced 0.23752 0.0989049663928305 0.0234919076176251 YLR459W 1117 induced 0.041103 0.103686519790889 0.00426182702296491 YMR001C 1121 induced 0.087654 0.126414768483943 0.0110807601166915 YMR239C 1128 induced 0.098805 0.121013349514563 0.0119567239987864 YNL150W 1132 induced -0.045328 0.100011669156087 -0.00453332893950711 YNL272C 1136 induced -0.026434 0.101506721433906 -0.00268322867438387 YNR035C 1138 induced 0.095594 0.111796116504854 0.010687037961165 YOR232W 1157 induced 0.085902 0.108028846153846 0.00927989394230768 YOR335C 1164 induced -0.068186 0.107999906646751 -0.00736408163461536 YPL010W 1166 induced -0.022629 0.10850354742345 -0.00245532677464525 YPL063W 1167 induced 0.16402 0.134102408513816 0.0219954770444361 YPL243W 1174 induced 0.065864 0.116775112023898 0.00769127597834202 YPR169W 1178 induced 0.065827 0.106677091112771 0.00702223287668038 YPR178W 1179 induced 0.39723 0.108744865571322 0.0431967229508962 YPR180W 1180 induced 0.038536 0.109673730395818 0.00422638687453324 YFR037C 1190 induced 0.20592 0.0971737303958178 0.0200100145631068 YGL073W 1191 induced 0.24779 0.107671769977595 0.0266799878827483 YGR198W 1196 induced -0.025491 0.116259335324869 -0.00296356671676624 YHR205W 1201 induced 0.16702 0.11415141896938 0.0190655699962658 YJL097W 1202 induced 0.066495 0.12778286034354 0.00849692129854369 YKL033W 1204 induced -0.0066273 0.110183905899925 -0.000730221799570573 YLR106C 1209 induced -0.11035 0.103178678117999 -0.0113857671303212 YLR147C 1210 induced -0.0031011 0.0994744212098581 -0.000308480127613891 YLR229C 1211 induced 0.0033813 0.10037574682599 0.00033940051274272 YNL149C 1213 induced 0.063612 0.100813106796117 0.0064129233495146 YPL075W 1221 induced 0.0071114 0.118664581777446 0.00084387130685213 ECM22OE+ 1230 induced 0.064732 0.102882281553398 0.00665977584951456 GAT4OE+ 1232 induced 0.0374445 0.143762602688574 0.00538311877637231 GIS1OE+ 1234 induced 0.0626035 0.110333271097834 0.00690724893717325 GZF3OE+ 1236 induced 0.003511 0.0970458364451083 0.000340727931758775 HAC1OE+ 1237 repressed 0.060557 0.0975042008961912 -0.00590456189367065 HMS1OE+ 1239 induced 0.0195575 0.11108429798357 0.00217253115781367 INO2OE+ 1241 repressed -0.026592 0.096734503360717 0.00257236391336819 MBP1OE+ 1242 induced -0.092828 0.111053958177745 -0.0103089168297237 MGA1OE+ 1245 induced -0.1786305 0.115631534727409 -0.0206553188641244 MIG1OE+ 1246 induced 0.045868 0.116065627333831 0.00532369819454816 MOT3OE+ 1247 induced 0.0803145 0.129390403286034 0.0103919255447162 RFX1OE+ 1253 induced 0.033692 0.137543409260642 0.00463411254480955 ROX1OE+ 1256 induced -0.0346265 0.126905806572069 -0.00439430391126775 SIP4OE+ 1259 induced 0.021557 0.103717326362957 0.00223583440440626 SKN7OE+ 1260 induced 0.027814 0.108653379387603 0.00302208509428679 SOK2OE+ 1261 bimodal -0.166382 0.116044156086632 -0.019307658778006 SUT1OE+ 1267 repressed 0.194951 0.125067681105302 -0.0243820694991597 SWI4OE+ 1268 induced 0.069824 0.0993469940253921 0.00693680451082898 TOS8OE+ 1269 induced 0.088809 0.101396097834205 0.00900488605255791 UPC2OE+ 1270 induced -0.0298695 0.137120052277819 -0.00409570740151232 XBP1OE+ 1271 induced -0.025359 0.112483663181479 -0.00285247321461913 YHP1OE+ 1273 induced -0.029446 0.12116644884242 -0.0035678672526139 YOX1OE+ 1274 induced -0.1413465 0.138706590739358 -0.0196056911279407 WT/cst6+ 1282 induced 0.092633 0.103005974607916 0.00954175244585508 WT/met31+ 1296 induced -0.057226 0.0979200896191187 -0.00560357504854369 WT/sok2+ 1312 induced 0.060141 0.105812640029873 0.00636367798403659