Rsc3-primary_8mers_1.1111111_lteq600sum0.35thrbgdsub.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 1. Cell cycle: Expression in response to Cln3p (set 1)(1) 2 induced 0.41 0.199373133 0.081742985 -0.0113279521442688 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 induced -0.1 0.238526419 -0.023852642 3. Cell Cycle: Expression in response to Clb2p (set 1, 40 min)(1) 4 repressed -0.64 0.177121453 0.11335773 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 repressed -0.32 0.154152819 0.049328902 5. Expression during the cell cycle (alpha factor arrest and release)(1) 6 repressed -0.6 0.204782487 0.122869492 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.06 0.213588032 -0.012815282 5. Expression during the cell cycle (alpha factor arrest and release)(4) 9 induced -0.21 0.207742252 -0.043625873 5. Expression during the cell cycle (alpha factor arrest and release)(5) 10 induced 0.13 0.209104742 0.027183617 5. Expression during the cell cycle (alpha factor arrest and release)(8) 13 repressed -0.07 0.194073002 0.01358511 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 repressed 0 0.232868745 0 5. Expression during the cell cycle (alpha factor arrest and release)(10) 15 repressed -0.21 0.170561987 0.035818017 5. Expression during the cell cycle (alpha factor arrest and release)(12) 17 induced -0.13 0.22009242 -0.028612015 5. Expression during the cell cycle (alpha factor arrest and release)(13) 18 induced -0.06 0.215200709 -0.012912043 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed 0.16 0.118156273 -0.018905004 5. Expression during the cell cycle (alpha factor arrest and release)(17) 22 repressed 0.32 0.117148058 -0.037487379 5. Expression during the cell cycle (alpha factor arrest and release)(18) 23 repressed -0.17 0.181003547 0.030770603 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed 0.06 0.125835512 -0.007550131 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 induced -0.07 0.149356329 -0.010454943 6. Expression during the cell cycle (cdc15 arrest and release)(7) 30 repressed 0.89 0.156444175 -0.139235316 6. Expression during the cell cycle (cdc15 arrest and release)(8) 31 repressed -0.43 0.161441841 0.069419992 6. Expression during the cell cycle (cdc15 arrest and release)(10) 33 induced -0.09 0.110395351 -0.009935582 6. Expression during the cell cycle (cdc15 arrest and release)(11) 34 induced -0.41 0.162059373 -0.066444343 6. Expression during the cell cycle (cdc15 arrest and release)(12) 35 induced 1.34 0.121399365 0.162675149 6. Expression during the cell cycle (cdc15 arrest and release)(13) 36 induced 0.03 0.113779873 0.003413396 6. Expression during the cell cycle (cdc15 arrest and release)(18) 41 repressed 0.13 0.137148525 -0.017829308 6. Expression during the cell cycle (cdc15 arrest and release)(20) 43 repressed -0.43 0.124267177 0.053434886 7. Expression during the cell Cycle (cdc28)(1) 48 repressed -0.59 0.140486837 0.082887234 7. Expression during the cell Cycle (cdc28)(3) 50 induced -0.23 0.236656087 -0.0544309 7. Expression during the cell Cycle (cdc28)(4) 51 induced -0.25 0.178544156 -0.044636039 7. Expression during the cell Cycle (cdc28)(5) 52 induced 0.28 0.09989031 0.027969287 7. Expression during the cell Cycle (cdc28)(7) 54 repressed 0.23 0.137298824 -0.031578729 7. Expression during the cell Cycle (cdc28)(8) 55 repressed -0.14 0.163193148 0.022847041 7. Expression during the cell Cycle (cdc28)(9) 56 repressed -0.01 0.196647218 0.001966472 7. Expression during the cell Cycle (cdc28)(10) 57 induced 0.03 0.115052278 0.003451568 7. Expression during the cell Cycle (cdc28)(11) 58 induced -0.08 0.222234877 -0.01777879 7. Expression during the cell Cycle (cdc28)(12) 59 induced 0.08 0.156301811 0.012504145 7. Expression during the cell Cycle (cdc28)(16) 63 repressed 0.22 0.135862584 -0.029889768 7. Expression during the cell Cycle (cdc28)(17) 64 repressed 0.02 0.162801531 -0.003256031 8. Expression during the cell cycle (cell size selection and release)(1) 65 repressed -0.14 0.118731796 0.016622451 8. Expression during the cell cycle (cell size selection and release)(2) 66 repressed -0.21 0.15688947 0.032946789 8. Expression during the cell cycle (cell size selection and release)(3) 67 repressed -0.19 0.103805545 0.019723054 8. Expression during the cell cycle (cell size selection and release)(4) 68 repressed -0.14 0.119653193 0.016751447 8. Expression during the cell cycle (cell size selection and release)(7) 71 induced -0.02 0.127510736 -0.002550215 8. Expression during the cell cycle (cell size selection and release)(8) 72 induced 0.14 0.172115385 0.024096154 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced 0.14 0.116617812 0.016326494 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 induced -0.723 0.131202857 -0.094859665 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -0.475 0.098972181 0.047011786 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(2) 87 induced -0.189 0.161542196 -0.030531475 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 induced -0.556 0.097879948 -0.054421251 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.434 0.098669249 -0.042822454 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.578 0.126165049 -0.072923398 12. Expression in tup1-deleted cells(1) 96 induced -0.089 0.141537528 -0.01259684 16. parental strain versus evolved strain 1(1) 100 induced -0.32 0.104138816 -0.033324421 17. parental strain versus evolved strain 2(1) 101 induced -0.32 0.114433346 -0.036618671 18. parental strain versus evolved strain 3(1) 102 bimodal -0.45 0.139358663 -0.062711398 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.123968913 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.112192868 0 26. Fink: Expression in diploid high copy TEC1(1) 110 induced 0 0.10235857 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.134571975 0 28. Young: Expression in srb4 mutant(1) 112 repressed 0 0.112648432 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.146099235 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.149781553 0 32. Young: Expression in swi2 mutant(1) 116 induced -0.084 0.12778286 -0.01073376 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.130496173 0 35. Young: Expression in tfa1 mutant(1) 119 repressed -0.438 0.106272872 0.046547518 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.105179238 0 37. Young: Expression in gcn5 mutant(1) 121 induced 0 0.110757562 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(2) 123 induced 0 0.100731889 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(3) 124 induced 0 0.130247386 0 39. Young: Expression in sir2 deletion mutant(1) 129 induced 0 0.120217513 0 40. Young: Expression in sir3 deletion mutant(1) 130 induced 0 0.122112584 0 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.112586819 0 45. Expression in snf2 mutant cells in minimal medium(1) 135 induced -0.052 0.130234783 -0.006772209 47. Expression in swi1 mutant cells in minimal medium(1) 137 induced 0.141 0.099398338 0.014015166 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(2) 139 repressed -0.047 0.123711258 0.005814429 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(3) 140 repressed -0.1 0.220168036 0.022016804 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(4) 141 repressed -0.075 0.227182132 0.01703866 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(5) 142 repressed -0.043 0.265627801 0.011421995 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(6) 143 repressed -0.015 0.243336912 0.003650054 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(7) 144 repressed -0.037 0.246595407 0.00912403 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(8) 145 repressed -0.046 0.246268671 0.011328359 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(2) 147 repressed -0.066 0.250842046 0.016555575 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(3) 148 repressed -0.054 0.275196975 0.014860637 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(4) 149 repressed -0.133 0.208489544 0.027729109 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 repressed -0.314 0.186485717 0.058556515 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(6) 151 repressed -0.097 0.198908234 0.019294099 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 bimodal -0.222 0.120190907 -0.026682381 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 repressed -0.051 0.234022125 0.011935128 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(2) 154 repressed -0.133 0.202919623 0.02698831 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(3) 155 repressed -0.187 0.201661221 0.037710648 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 repressed -0.031 0.257055172 0.00796871 52. Expression in response to 50 nM alpha-factor in fus3 deletion mutant 30 min(1) 157 repressed -0.081 0.183801344 0.014887909 53. Expression in response to overproduction of Ste4p(1) 158 repressed -0.04 0.166629481 0.006665179 54. Expression in response to overproduction of Ste5p(1) 159 repressed -0.034 0.215732356 0.0073349 55. Expression in response to overproduction of Ste11p(1) 160 repressed 0.044 0.146054425 -0.006426395 56. Expression in response to overproduction of Ste12p(1) 161 repressed -0.071 0.156043223 0.011079069 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 repressed -0.077 0.099705471 0.007677321 59. Expression in sst2 deletion mutant cells(1) 164 repressed -0.035 0.128352782 0.004492347 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed 0.008 0.124565907 -0.000996527 61. Expression in response to alpha-factor in rst1 rst2 double deletion mutant cells(1) 166 repressed -0.022 0.188289768 0.004142375 63. Expression in response to alpha-factor in fus3 loss-of-function mutant cells(1) 168 induced 0.034 0.107211538 0.003645192 66. Expression in ste5 deletion mutant cells(1) 171 induced 0.041 0.118174944 0.004845173 69. Expression in ste12 deletion mutant cells(1) 174 repressed 0.043 0.105727222 -0.004546271 71. Expression in bni1 deletion mutant cells(1) 176 induced -0.063 0.104554238 -0.006586917 72. Expression in response to overproduction of activated Bni1p(1) 177 induced -0.017 0.09818708 -0.00166918 73. Expression in response to overproduction of activated Pkc1p(1) 178 induced 0.002 0.102097181 0.000204194 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 bimodal -0.017 0.137221807 -0.002332771 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(2) 182 repressed 0.025 0.114112677 -0.002852817 77. Expression in tec1 deletion mutant cells(1) 183 induced 0.014 0.114451083 0.001602315 78. Expression in kss1 deletion mutant cells(1) 184 induced 0.08 0.112715179 0.009017214 79. Expression in fus3 deletion mutant cells(1) 185 repressed -0.016 0.146792849 0.002348686 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed 0.023 0.115757095 -0.002662413 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.045 0.198508682 0.008932891 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.009 0.098082524 0.000882743 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced -0.041 0.123760269 -0.005074171 87. Expression in response to a-factor in wild-type alpha cells(1) 193 repressed -0.001 0.248936706 0.000248937 92. Expression in cna1 cna2 double mutant cells(1) 198 repressed -0.009 0.127062173 0.00114356 94. Expression in response to 1ug/mL FK506(1) 200 bimodal -0.071 0.130962939 -0.009298369 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 repressed 0 0.119259709 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 induced 0 0.111109037 0 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0 0.114598581 0 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.124277913 0 106. Young: Expression in tsm1 deletion mutant(1) 212 induced 0 0.124507562 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.13509242 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0 0.100768764 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0 0.095858383 0 110. Rosetta 2000: Expression in ade2 (haploid) deletion mutant (1) 229 induced -0.206 0.107851475 -0.022217404 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced -0.066 0.097139656 -0.006411217 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced -0.036 0.143989918 -0.005183637 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced -0.286 0.096222928 -0.027519757 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed -0.126 0.107654966 0.013564526 119. Rosetta 2000: Expression in arg5,6 deletion mutant (1) 238 repressed 0.106 0.101723768 -0.010782719 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 repressed -0.409 0.177735717 0.072693908 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced -0.282 0.112537808 -0.031735662 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced -0.136 0.102900019 -0.013994403 126. Rosetta 2000: Expression in bub2 deletion mutant (1) 245 induced -0.066 0.099705471 -0.006580561 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced -0.389 0.099403473 -0.038667951 128. Rosetta 2000: Expression in bub3 (haploid **2) deletion mutant (1) 247 repressed -0.146 0.120074683 0.017530904 133. Rosetta 2000: Expression in cin5 deletion mutant (1) 252 repressed -0.173 0.133124066 0.023030463 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 induced 0.116 0.136387696 0.015820973 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced -0.306 0.101224795 -0.030974787 137. Rosetta 2000: Expression in clb2 deletion mutant (1) 256 repressed -0.319 0.10278146 0.032787286 142. Rosetta 2000: Expression in cue1 deletion mutant (1) 261 induced -0.09 0.108672517 -0.009780527 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 bimodal -0.196 0.1042205 -0.020427218 146. Rosetta 2000: Expression in dfr1 deletion mutant (1) 265 induced -0.013 0.103282767 -0.001342676 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed 0.003 0.097113051 -0.000291339 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 bimodal -0.425 0.112691374 -0.047893834 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed 0.003 0.109493092 -0.000328479 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.093 0.107936893 0.010038131 153. Rosetta 2000: Expression in ecm1 (**3) deletion mutant (1) 272 induced 0.007 0.097285754 0.000681 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced 0.086 0.117513069 0.010106124 162. Rosetta 2000: Expression in erg3 (haploid) deletion mutant (1) 281 repressed -0.1 0.170013069 0.017001307 163. Rosetta 2000: Expression in erg4 (haploid **7) deletion mutant (1) 282 induced -0.096 0.106066561 -0.01018239 164. Rosetta 2000: Expression in erg5 deletion mutant (1) 283 repressed -0.04 0.115794903 0.004631796 166. Rosetta 2000: Expression in erp2 deletion mutant (1) 285 repressed 0.02 0.117549477 -0.00235099 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced -0.219 0.108978249 -0.023866236 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 repressed -0.053 0.146792849 0.007780021 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 induced -0.003 0.117823469 -0.00035347 177. Rosetta 2000: Expression in gcn4 deletion mutant (1) 296 induced -0.01 0.111766243 -0.001117662 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced -0.057 0.12981236 -0.007399305 182. Rosetta 2000: Expression in hat2 deletion mutant (1) 301 induced 0.103 0.108083458 0.011132596 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 repressed -0.133 0.113915235 0.015150726 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced -0.272 0.10306152 -0.028032733 187. Rosetta 2000: Expression in his1 deletion mutant (1) 306 induced -0.04 0.102053771 -0.004082151 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced -0.06 0.103327577 -0.006199655 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced -0.146 0.112104649 -0.016367279 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 repressed -0.146 0.097658701 0.01425817 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced 0.033 0.097523805 0.003218286 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced -0.043 0.119378734 -0.005133286 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced -0.166 0.128435866 -0.021320354 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 induced 0.123 0.097616692 0.012006853 204. Rosetta 2000: Expression in mad2 deletion mutant (1) 323 induced 0.073 0.10642317 0.007768891 206. Rosetta 2000: Expression in mbp1 deletion mutant (1) 325 induced -0.133 0.125786968 -0.016729667 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.046 0.117778659 0.005417818 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 induced -0.02 0.120678211 -0.002413564 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 induced -0.076 0.146056292 -0.011100278 233. Rosetta 2000: Expression in ras1 deletion mutant (1) 352 repressed -0.405 0.097588219 0.039523229 236. Rosetta 2000: Expression in rgt1 deletion mutant (1) 355 induced -0.023 0.103492812 -0.002380335 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced -0.535 0.108489078 -0.058041657 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced -0.226 0.104317588 -0.023575775 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed 0.399 0.120410288 -0.048043705 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed 0.372 0.107661501 -0.040050078 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed 0.06 0.111039955 -0.006662397 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.548 0.108566094 -0.05949422 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.166 0.123332244 -0.020473153 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.209 0.130492438 0.02727292 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced -0.01 0.139945855 -0.001399459 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.08 0.135560586 -0.010844847 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced -0.09 0.103981049 -0.009358294 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced -0.505 0.125398152 -0.063326067 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced -0.508 0.121451643 -0.061697435 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced -0.93 0.131371359 -0.122175364 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 repressed -0.116 0.128352782 0.014888923 275. Rosetta 2000: Expression in ste12 (haploid) deletion mutant (1) 394 repressed 0.143 0.105727222 -0.015118993 276. Rosetta 2000: Expression in ste18 (haploid) deletion mutant (1) 395 repressed 0.312 0.111388163 -0.034753107 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 repressed -0.086 0.114757748 0.009869166 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced 0.136 0.118174944 0.016071792 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 repressed -0.811 0.109898245 0.089127477 284. Rosetta 2000: Expression in swi5 deletion mutant (1) 403 repressed 0.233 0.109443148 -0.025500253 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced -0.478 0.147995239 -0.070741724 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.07 0.113347181 0.007934303 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 repressed 0.08 0.122384709 -0.009790777 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced -0.04 0.167434653 -0.006697386 291. Rosetta 2000: Expression in ubp8 deletion mutant (1) 410 induced -0.233 0.10574776 -0.024639228 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 repressed 0.06 0.096581871 -0.005794912 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.003 0.161271004 0.000483813 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced -0.249 0.099235437 -0.024709624 303. Rosetta 2000: Expression in yap3 deletion mutant (1) 422 induced -0.083 0.108505414 -0.009005949 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed 0.465 0.120260922 -0.055921329 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 bimodal -0.236 0.107331497 -0.025330233 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 repressed -0.113 0.128568895 0.014528285 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced -0.093 0.099180825 -0.009223817 334. Rosetta 2000: Expression in yhl029c deletion mutant (1) 453 repressed 0.033 0.145821975 -0.004812125 336. Rosetta 2000: Expression in yhl045w deletion mutant (1) 455 induced -0.023 0.096221994 -0.002213106 337. Rosetta 2000: Expression in yhr011w (**14) deletion mutant (1) 456 repressed -0.296 0.11243652 0.03328121 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.066 0.118108663 -0.007795172 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 induced -0.08 0.100579257 -0.008046341 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced -0.05 0.152082244 -0.007604112 351. Rosetta 2000: Expression in ymr009w deletion mutant (1) 470 repressed 0.096 0.099228902 -0.009525975 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.289 0.127196135 -0.036759683 358. Rosetta 2000: Expression in ymr031w-a deletion mutant (1) 477 repressed -0.057 0.155727689 0.008876478 359. Rosetta 2000: Expression in ymr034c deletion mutant (1) 478 repressed 0.146 0.103615571 -0.015127873 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed 0.229 0.096587472 -0.022118531 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed 0.365 0.12236137 -0.0446619 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.681 0.173620706 -0.118235701 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced -0.664 0.118946509 -0.078980482 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 bimodal -0.498 0.161459578 -0.08040687 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced -0.551 0.154557506 -0.085161186 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced -0.163 0.12839199 -0.020927894 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced -0.512 0.121972087 -0.062449709 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced -0.189 0.130351475 -0.024636429 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed 0.249 0.096958551 -0.024142679 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 bimodal -0.203 0.101692494 -0.020643576 399. Rosetta 2000: Expression in response to FR901,228(1) 518 repressed -0.073 0.105496173 0.007701221 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.359 0.129268577 -0.046407419 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 repressed -0.183 0.126813387 0.02320685 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced -0.296 0.109152819 -0.032309235 404. Rosetta 2000: Expression in response to MMS(1) 523 induced -0.435 0.095807506 -0.041676265 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced -0.316 0.097609223 -0.030844515 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 bimodal -0.55 0.112275952 -0.061751774 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 induced -0.16 0.16540422 -0.026464675 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(3) 529 induced -0.23 0.170441561 -0.039201559 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0.05 0.106476848 -0.005323842 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(5) 531 repressed 0.36 0.125955937 -0.045344137 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(6) 532 repressed 0.11 0.155091019 -0.017060012 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 repressed 0.2 0.160272591 -0.032054518 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(9) 535 induced -0.14 0.127738051 -0.017883327 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 induced 0.21 0.156425037 0.032849258 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(12) 538 bimodal 0.28 0.137271285 0.03843596 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 bimodal -0.33 0.123976382 -0.040912206 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(2) 541 induced -0.33 0.128826083 -0.042512607 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 induced -0.13 0.162661501 -0.021145995 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.05 0.105662341 0.005283117 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(6) 545 repressed 0.31 0.120325803 -0.037300999 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 repressed 0.08 0.109130881 -0.008730471 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(13) 552 repressed 0.18 0.133047984 -0.023948637 Expression in PDR1-3 mutant(1) 555 repressed -0.029 0.117597554 0.003410329 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(2) 558 induced 0 0.117134055 0 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(3) 559 induced 0 0.102499533 0 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(4) 560 induced 0 0.138682319 0 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.333 0.104918316 0.034937799 pho80 vs WT(1) 581 induced 0.176 0.113459205 0.01996882 PHO81c vs WT exp1(1) 583 induced -0.074 0.104935119 -0.007765199 PHO81c vs WT exp2(1) 584 induced -0.34 0.123192214 -0.041885353 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced -0.742 0.114778286 -0.085165488 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced -0.541 0.098164675 -0.053107089 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.704 0.107183999 -0.075457535 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced -0.287 0.126214526 -0.036223569 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced -0.158 0.105699216 -0.016700476 436. Expression in wild type versus strain MS221 under steady state conditions in YPD(1) 593 repressed 0.07 0.115582058 -0.008090744 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced -0.776 0.104334391 -0.080963488 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced -0.801 0.107388443 -0.086018143 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced -0.583 0.119884242 -0.069892513 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced -0.53 0.118953043 -0.063045113 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed 0 0.120702016 0 465. Expression in rpd3 deletion(1) 622 induced -0.344 0.115147965 -0.0396109 467. Expression in sin3 deletion(1) 624 induced -0.131 0.110011202 -0.014411468 469. Expression in hda1 deletion(1) 626 induced 0.21 0.137490198 0.028872942 470. Expression in hda1 deletion(1) 627 induced -0.015 0.113072255 -0.001696084 472. Expression in sap3 deletion(1) 629 induced 0.164 0.107340833 0.017603897 473. Expression in ume6 deletion(1) 630 induced -0.805 0.116069828 -0.093436212 474. Expression in hda1 deletion(1) 631 induced -0.102 0.119136016 -0.012151874 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(2) 635 induced -0.359 0.108659914 -0.039008909 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced -0.145 0.106885269 -0.015498364 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced 1.009 0.12121686 0.122307811 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -1.471 0.11509382 -0.169303009 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 induced 0 0.128864358 0 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced 1.075 0.118829817 0.127742053 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed -1.101 0.104683999 0.115257083 481. Expression in response to heat shock: 15,30,45,60,120 min(2) 653 repressed 0.578 0.120693615 -0.069760909 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced 0.123 0.118678118 0.014597409 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 induced 0.074 0.102828603 0.007609317 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 repressed -0.021 0.100909261 0.002119094 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0.888 0.100462099 0.089210344 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0.058 0.109513163 0.006351763 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 0.29 0.103462939 0.030004252 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 repressed -0.106 0.105540982 0.011187344 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced -0.29 0.105457431 -0.030582655 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -0.27 0.116533327 -0.031463998 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 0.12 0.124835232 0.014980228 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced -0.4 0.120061146 -0.048024459 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced -0.1 0.116453043 -0.011645304 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced 0.24 0.099124813 0.023789955 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.23 0.118971247 0.027363387 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.22 0.122318428 0.026910054 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.56 0.133944175 0.075008738 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced -0.09 0.105949869 -0.009535488 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 bimodal -0.06 0.103523152 -0.006211389 503. Brown enviromental changes :37C to 25C shock - 15 min(1) 701 repressed 0.3 0.103333178 -0.030999953 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed -0.23 0.101252801 0.023288144 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced 0.37 0.110342606 0.040826764 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 0.24 0.126073096 0.030257543 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 0.18 0.125402819 0.022572507 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.1 0.123393857 0.012339386 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced -0.22 0.106832058 -0.023503053 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced 0.08 0.114636389 0.009170911 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced 0.06 0.104343727 0.006260624 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed -0.12 0.101548264 0.012185792 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 repressed -0.43 0.108751867 0.046763303 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.32 0.123277633 -0.039448842 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.12 0.110942868 0.013313144 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 repressed 0.14 0.098825149 -0.013835521 546. Brown enviromental changes :2.5mM DTT 060 min dtt-1(1) 744 induced 0.16 0.106202857 0.016992457 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 induced 0.12 0.10893764 0.013072517 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 repressed 0.11 0.116971154 -0.012866827 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -0.01 0.107430919 0.001074309 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced -0.54 0.1335941 -0.072140814 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -0.04 0.11326503 -0.004530601 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.38 0.132636296 -0.050401792 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.43 0.117384242 -0.050475224 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced -0.42 0.099378267 -0.041738872 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced -0.49 0.117573282 -0.057610908 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced -0.01 0.111622479 -0.001116225 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.4 0.12147078 -0.048588312 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced -0.86 0.108567028 -0.093367644 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.06 0.119876307 -0.007192578 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced -0.14 0.107627894 -0.015067905 569. Brown enviromental changes :1M sorbitol - 60 min(1) 767 induced -0.15 0.113666916 -0.017050037 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed -0.14 0.105763163 0.014806843 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed 0.14 0.114159821 -0.015982375 581. Brown enviromental changes :aa starv 4 h(1) 779 induced -0.32 0.123876494 -0.039640478 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.31 0.109613984 0.033980335 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.07 0.099168689 0.006941808 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 repressed -1 0.106137509 0.106137509 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced -1.29 0.096745706 -0.12480196 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced -1 0.116850728 -0.116850728 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced -0.76 0.112207338 -0.085277577 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced -1.12 0.111593073 -0.124984242 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced -5.64 0.098994119 -0.55832683 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced 0.07 0.110407487 0.007728524 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced -1.51 0.109088872 -0.164724197 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced -0.81 0.118287435 -0.095812822 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced -0.81 0.102918689 -0.083364138 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced -0.89 0.113194548 -0.100743148 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced -2.64 0.098294903 -0.259498544 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced -2.4 0.1271868 -0.30524832 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced -2.74 0.13053118 -0.357655433 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal 0.3 0.136449309 0.040934793 636. Brown enviromental changes :ethanol car-1(1) 827 induced -0.25 0.104546303 -0.026136576 637. Brown enviromental changes :galactose car-1(1) 828 induced 0.42 0.099704537 0.041875906 641. Brown enviromental changes :sucrose car-1(1) 832 repressed 0.29 0.098757001 -0.02863953 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced -0.43 0.097033701 -0.041724491 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -0.01 0.130759429 0.001307594 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.1 0.122080844 -0.012208084 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed 0.26 0.097131721 -0.025254248 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.23 0.10596714 0.024372442 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed -0.04 0.100804238 0.00403217 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced -0.04 0.103915702 -0.004156628 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced 0.07 0.110034541 0.007702418 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0 0.117028099 0 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 induced -0.098 0.104060866 -0.010197965 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.433 0.120468167 0.052162716 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 repressed 0.356 0.118808346 -0.042295771 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 repressed -0.043 0.096892737 0.004166388 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 0 0.106285474 0 (Rich Media 2% Glucose YPD-185769) wt 5mM aF, 30 min. 876 repressed -0.07 0.190414488 0.013329014 Rich Media 2% Glucose YPD-Average wt 5mM aF, 30 min. 877 repressed -0.17 0.154715739 0.026301676 (Rich Media 2% Glucose YPD-185387) fus3 5mM aF, 30 min. 879 repressed 0.13 0.104657394 -0.013605461 (Rich Media 2% Glucose YPD-185440) fus3 5mM aF, 30 min. 880 repressed -0.2 0.101615478 0.020323096 Rich Media 2% Glucose YPD-Average fus3 5mM aF, 30 min. 881 repressed -0.03 0.121930078 0.003657902 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 repressed -0.28 0.164679332 0.046110213 (Rich Media 2% Glucose YPD-185264) kss1 5mM aF, 30 min. 884 repressed -0.05 0.119021658 0.005951083 Rich Media 2% Glucose YPD-Average kss1 5mM aF, 30 min. 885 repressed -0.16 0.157513536 0.025202166 ( trp- 2% Glucose-228688) wt 5mM aF, 30 min. 907 repressed 0.15 0.190766897 -0.028615035 ( trp- 2% Glucose-228721) wt 5mM aF, 30 min. 908 repressed -0.02 0.178166542 0.003563331 trp- 2% Glucose-Average wt 5mM aF, 30 min. 909 repressed 0.06 0.195489171 -0.01172935 Addition of 1M NaCl (90) 917 bimodal -0.7 0.118637509 -0.083046257 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -2.699 0.104413742 -0.281812689 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed -0.131 0.120154966 0.015740301 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed 0.132 0.100774365 -0.013302216 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed 0.072 0.117216206 -0.008439567 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.136 0.122338966 0.016638099 dun1- + 0.02% MMS - 90 min 934 repressed -0.492 0.102792662 0.05057399 dun1- + 0.02% MMS - 120 min 935 repressed -0.596 0.123206684 0.073431184 wt_plus_gamma_5_min 936 induced -0.667 0.104464152 -0.06967759 wt_plus_gamma_10_min 937 induced -0.093 0.123193148 -0.011456963 wt_plus_gamma_20_min 938 induced -0.354 0.109147685 -0.03863828 wt_plus_gamma_30_min 939 repressed -0.402 0.116307879 0.046755767 wt_plus_gamma_45_min 940 repressed -0.304 0.109269511 0.033217931 wt_plus_gamma_60_min 941 repressed -1.042 0.135111557 0.140786243 wt_plus_gamma_90_min 942 induced -1.06 0.101468913 -0.107557048 DES460 (wt) - mock irradiation - 30 min 945 induced 0.205 0.104910848 0.021506724 mec1_plus_gamma_20_min 950 repressed -0.214 0.114342793 0.024469358 mec1_plus_gamma_30_min 951 repressed 0.085 0.148409727 -0.012614827 mec1_plus_gamma_45_min 952 repressed -0.171 0.169856703 0.029045496 mec1_plus_gamma_60_min 953 repressed 0.136 0.149497293 -0.020331632 DES459 (mec1) - log phase (IR time = 0 sample) 964 repressed 0.331 0.119456217 -0.039540008 100 microM CuSO4 30 min (B) 970 induced -0.17 0.10260969 -0.017443647 gal3+gal 977 repressed -0.402 0.112182599 0.045097405 gal5+gal 979 induced -0.415 0.11620519 -0.048225154 gal7+gal 981 induced -0.688 0.106286408 -0.073125049 gal10+gal 982 induced -1.036 0.120070482 -0.124393019 gal3-gal 986 induced -0.555 0.131266337 -0.072852817 gal4-gal 987 induced -0.711 0.109246639 -0.077674361 gal6-gal 989 repressed -0.455 0.102879948 0.046810376 gal10-gal 991 induced -0.658 0.120090086 -0.079019277 gal80-gal 992 repressed -0.027 0.096393764 0.002602632 gal2gal80-gal 994 repressed 0.405 0.107082711 -0.043368498 BY4741 GAL t=30min vs. t=0 (YT00261) 996 repressed 0 0.098310306 0 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced -0.14 0.119465553 -0.016725177 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced -0.11 0.138553491 -0.015240884 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed -0.08 0.14137416 0.011309933 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed -0.08 0.135945668 0.010875653 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed -0.04 0.146862397 0.005874496 YAL038W 1010 induced -0.11831 0.108418596 -0.012827004 YAL043C 1011 induced 0.02908 0.096305078 0.002800552 YBL020W 1013 induced -0.11373 0.138184279 -0.015715698 YBL084C 1015 induced -0.38619 0.131096901 -0.050628312 YBR002C 1016 induced 0.26527 0.10898245 0.028909774 YBR088C 1018 induced -0.28542 0.104749813 -0.029897692 YBR142W 1019 induced 0.0018381 0.097301624 0.00017885 YBR196C 1024 induced -0.20338 0.125878921 -0.025601255 YDL047W 1032 induced 0.06093 0.106963219 0.006517269 YDL132W 1037 induced -0.14884 0.102160661 -0.015205593 YDR047W 1039 induced -0.23803 0.130765963 -0.031126222 YDR141C 1042 induced 0.015004 0.130139563 0.001952614 YDR373W 1045 induced -0.10077 0.108953977 -0.010979292 YDR489W 1047 induced -0.16758 0.131147778 -0.021977745 YER023W 1049 induced -0.18152 0.104582711 -0.018983854 YER172C 1050 induced -0.018643 0.108666449 -0.002025869 YFL005W 1051 induced -0.011498 0.097585418 -0.001122037 YFL024C 1052 induced -0.055389 0.121556199 -0.006732876 YGL116W 1055 induced -0.088029 0.113056385 -0.009952241 YGR048W 1057 induced -0.17331 0.109150485 -0.018916871 YGR175C 1062 induced 0.10985 0.116416169 0.012788316 YHR090C 1068 induced -0.1146 0.105435493 -0.012082907 YHR188C 1070 induced -0.025178 0.106587472 -0.002683659 YIR022W 1076 induced -0.037098 0.124453883 -0.00461699 YJL081C 1082 induced -0.21243 0.114699403 -0.024365594 YJL091C 1083 induced -0.014037 0.116747106 -0.001638779 YJL194W 1084 induced -0.31625 0.155264656 -0.049102448 YJR007W 1086 repressed -0.23393 0.121999627 0.028539373 YJR076C 1087 induced -0.17345 0.10757795 -0.018659395 YKL052C 1089 induced -0.12007 0.106546863 -0.012793082 YKL125W 1091 repressed 0.19037 0.108912901 -0.020733749 YKR079C 1094 induced -0.02342 0.14223441 -0.00333113 YKR086W 1095 induced -0.17927 0.102743185 -0.018418771 YLL003W 1096 induced -0.16585 0.104352128 -0.017306801 YLR060W 1100 repressed -0.069741 0.135228249 0.009430953 YLR076C 1101 induced -0.079614 0.144085605 -0.011471231 YLR086W 1102 induced -0.21252 0.146604276 -0.031156341 YLR101C 1103 induced 0.043678 0.118614638 0.00518085 YLR163C 1105 induced -0.096123 0.115576456 -0.011109556 YLR359W 1112 induced -0.039272 0.111837192 -0.00439207 YLR378C 1113 induced -0.38193 0.14273525 -0.054514874 YLR440C 1115 induced -0.25476 0.11284354 -0.02874802 YLR457C 1116 induced 0.027677 0.1204705 0.003334262 YLR459W 1117 induced -0.073588 0.14879621 -0.010949615 YML031W 1118 induced -0.26728 0.106982356 -0.028594244 YML046W 1119 repressed 0.025068 0.098763536 -0.002475804 YML130C 1120 induced 0.068538 0.119532767 0.008192537 YMR043W 1122 induced -0.093861 0.109375 -0.010266047 YMR079W 1124 induced -0.1712 0.123723394 -0.021181445 YMR200W 1126 induced 0.030543 0.097442121 0.002976175 YMR239C 1128 induced 0.12868 0.138869025 0.017869666 YNL158W 1133 induced -0.023199 0.145835978 -0.003383249 YNL272C 1136 induced 0.020699 0.101383028 0.002098527 YNR035C 1138 induced -0.31642 0.110397685 -0.034932035 YNR043W 1139 induced -0.14599 0.116753174 -0.017044796 YOR145C 1151 repressed -0.0004499 0.107662901 0.0000484 YOR168W 1153 repressed 0.075936 0.104875373 -0.007963816 YOR204W 1155 induced 0.21365 0.120891057 0.025828374 YOR232W 1157 induced -0.27017 0.106390963 -0.028743647 YOR236W 1158 induced -0.15513 0.104986931 -0.016286623 YOR259C 1159 repressed -0.16619 0.107141524 0.01780585 YOR261C 1160 induced -0.026316 0.101044156 -0.002659078 YOR281C 1162 induced -0.053563 0.101391897 -0.005430854 YOR335C 1164 induced -0.052068 0.113909167 -0.005931023 YPL010W 1166 induced -0.041714 0.154838499 -0.006458933 YPL063W 1167 induced 0.096339 0.1207823 0.011636046 YPL076W 1168 induced -0.015106 0.122689974 -0.001853355 YPL126W 1170 repressed 0.034953 0.099786221 -0.003487828 YPL231W 1173 induced -0.1553 0.098560493 -0.015306445 YPL243W 1174 induced -0.2627 0.134489824 -0.035330477 YPR105C 1176 induced -0.034684 0.097763723 -0.003390837 YPR144C 1177 repressed -0.12408 0.103753734 0.012873763 YPR169W 1178 induced 0.048298 0.103689787 0.005008009 YPR178W 1179 induced -0.098681 0.125013069 -0.012336415 YBR029C 1182 induced -0.12526 0.129061333 -0.016166223 YDR054C 1183 induced -0.030612 0.097040235 -0.002970596 YFR037C 1190 induced -0.053397 0.113740198 -0.006073385 YGL122C 1192 induced -0.03585 0.132734317 -0.004758525 YGR090W 1194 repressed -0.05938 0.100100822 0.005943987 YGR198W 1196 induced 0.020051 0.102226942 0.002049752 YHR205W 1201 induced 0.083503 0.10351335 0.008643675 YJL097W 1202 induced -0.039015 0.112710045 -0.004397382 YKL033W 1204 induced -0.014467 0.111066094 -0.001606793 YLR229C 1211 induced -0.092057 0.11876447 -0.010933101 YNL149C 1213 induced -0.0071988 0.10846994 -0.000780853 YNL245C 1215 induced 0.029342 0.098891897 0.002901686 YNL258C 1216 induced -0.071799 0.138492812 -0.009943645 BYE1OE+ 1225 induced -0.0237135 0.125777166 -0.002982617 CAT8OE+ 1226 repressed NaN 0.105450429 0 CUP2OE+ 1229 repressed 0.016449 0.14300224 -0.002352244 GAT4OE+ 1232 induced 0.048555 0.149104276 0.007239758 GIS1OE+ 1234 induced -0.106393 0.108997853 -0.011596609 HAC1OE+ 1237 repressed 0.091119 0.189669063 -0.017282455 HAP4OE+ 1238 repressed -0.070672 0.175996546 0.012438028 HMS1OE+ 1239 induced 0.191881 0.10567261 0.020276566 HSF1OE+ 1240 repressed 0.088402 0.096866598 -0.008563201 INO2OE+ 1241 repressed 0.0621625 0.108707524 -0.006757531 MBP1OE+ 1242 repressed -0.149793 0.135556385 0.020305398 MET4OE+ 1244 repressed -0.023453 0.154275579 0.003618225 MOT3OE+ 1247 induced 0.040161 0.121679425 0.004886767 RFX1OE+ 1253 induced 0.116016 0.105259522 0.012211789 ROX1OE+ 1256 bimodal -0.0513905 0.131432972 -0.006754406 RSC30OE+ 1257 repressed 0.1139175 0.098552558 -0.011226861 SFP1OE+ 1258 repressed -0.2630025 0.106156647 0.027919463 SKN7OE+ 1260 induced -0.042086 0.150340739 -0.00632724 SOK2OE+ 1261 induced -0.0347865 0.108184746 -0.003763369 SPS18OE+ 1262 induced 0.041627 0.112387509 0.004678355 SWI4OE+ 1268 induced NaN 0.177920556 0 TOS8OE+ 1269 induced 0.0301255 0.110916729 0.003341422 UPC2OE+ 1270 induced 0.573117 0.111620146 0.063971403 XBP1OE+ 1271 bimodal -0.0140575 0.13353342 -0.001877146 YAP1OE+ 1272 repressed 0.012833 0.114516897 -0.001469595 YHP1OE+ 1273 induced -0.204047 0.10723581 -0.021881145 YOX1OE+ 1274 bimodal -0.259383 0.133189414 -0.03454707 YPR015COE+ 1275 induced -0.045552 0.137162061 -0.006248006 ZAP1OE+ 1277 induced 0.1132095 0.098349515 0.011134099 WT/cst6+ 1282 induced NaN 0.101551064 0 WT/sok2+ 1312 induced NaN 0.097416916 0