Rsc30-primary_8mers_1.111111.1_lteq600sum0.35thrbgdsub.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 1. Cell cycle: Expression in response to Cln3p (set 1)(1) 2 induced 0 0.1773455 0 0.00570292910596026 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 induced 0 0.219387136 0 3. Cell Cycle: Expression in response to Clb2p (set 1, 40 min)(1) 4 repressed 0.18 0.129981796 -0.023396723 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 repressed -0.43 0.130163835 0.055970449 5. Expression during the cell cycle (alpha factor arrest and release)(1) 6 repressed -0.43 0.187155993 0.080477077 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced -0.12 0.120014003 -0.01440168 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.19 0.22337612 -0.042441463 5. Expression during the cell cycle (alpha factor arrest and release)(4) 9 induced -0.35 0.192191468 -0.067267014 5. Expression during the cell cycle (alpha factor arrest and release)(5) 10 induced -0.32 0.175189974 -0.056060792 5. Expression during the cell cycle (alpha factor arrest and release)(8) 13 repressed -0.06 0.191197722 0.011471863 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 repressed 0.15 0.196059093 -0.029408864 5. Expression during the cell cycle (alpha factor arrest and release)(10) 15 repressed 0.22 0.126755975 -0.027886314 5. Expression during the cell cycle (alpha factor arrest and release)(12) 17 induced 0.2 0.201759242 0.040351848 5. Expression during the cell cycle (alpha factor arrest and release)(13) 18 induced 0 0.157632095 0 5. Expression during the cell cycle (alpha factor arrest and release)(15) 20 induced 0.1 0.100540049 0.010054005 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed 0.3 0.122965366 -0.03688961 5. Expression during the cell cycle (alpha factor arrest and release)(17) 22 repressed -0.12 0.103231423 0.012387771 5. Expression during the cell cycle (alpha factor arrest and release)(18) 23 repressed 0.44 0.171060493 -0.075266617 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed -0.55 0.123605769 0.067983173 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed -0.32 0.111571602 0.035702913 6. Expression during the cell cycle (cdc15 arrest and release)(5) 28 induced 0.1 0.098527819 0.009852782 6. Expression during the cell cycle (cdc15 arrest and release)(7) 30 repressed 0.04 0.122881815 -0.004915273 6. Expression during the cell cycle (cdc15 arrest and release)(8) 31 repressed -0.19 0.13336025 0.025338448 6. Expression during the cell cycle (cdc15 arrest and release)(10) 33 induced -0.16 0.117226008 -0.018756161 6. Expression during the cell cycle (cdc15 arrest and release)(11) 34 induced -0.05 0.150256255 -0.007512813 6. Expression during the cell cycle (cdc15 arrest and release)(18) 41 repressed -0.05 0.108023245 0.005401162 6. Expression during the cell cycle (cdc15 arrest and release)(20) 43 repressed -0.44 0.112940627 0.049693876 7. Expression during the cell Cycle (cdc28)(1) 48 repressed -0.07 0.118915235 0.008324066 7. Expression during the cell Cycle (cdc28)(3) 50 induced -0.54 0.183613237 -0.099151148 7. Expression during the cell Cycle (cdc28)(4) 51 induced -0.19 0.159414675 -0.030288788 7. Expression during the cell Cycle (cdc28)(5) 52 induced 0.42 0.12178118 0.051148096 7. Expression during the cell Cycle (cdc28)(6) 53 repressed 0.68 0.120652539 -0.082043727 7. Expression during the cell Cycle (cdc28)(7) 54 repressed 0.52 0.139518297 -0.072549515 7. Expression during the cell Cycle (cdc28)(8) 55 repressed 0.47 0.152147591 -0.071509368 7. Expression during the cell Cycle (cdc28)(9) 56 repressed -0.02 0.164457151 0.003289143 7. Expression during the cell Cycle (cdc28)(10) 57 induced 0.09 0.153146938 0.013783224 7. Expression during the cell Cycle (cdc28)(11) 58 induced -0.52 0.18584438 -0.096639078 7. Expression during the cell Cycle (cdc28)(12) 59 induced 0.3 0.1237486 0.03712458 7. Expression during the cell Cycle (cdc28)(15) 62 repressed 0.21 0.098082991 -0.020597428 7. Expression during the cell Cycle (cdc28)(16) 63 repressed -0.49 0.097289022 0.047671621 7. Expression during the cell Cycle (cdc28)(17) 64 repressed -0.29 0.128189881 0.037175065 8. Expression during the cell cycle (cell size selection and release)(1) 65 repressed 0.28 0.103364918 -0.028942177 8. Expression during the cell cycle (cell size selection and release)(2) 66 bimodal -0.05 0.119005788 -0.005950289 8. Expression during the cell cycle (cell size selection and release)(3) 67 repressed 0.16 0.096823189 -0.01549171 8. Expression during the cell cycle (cell size selection and release)(4) 68 repressed 0.16 0.111330751 -0.01781292 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed 0 0.106034354 0 8. Expression during the cell cycle (cell size selection and release)(7) 71 induced -0.22 0.101098768 -0.022241729 8. Expression during the cell cycle (cell size selection and release)(8) 72 induced 0.12 0.167649832 0.02011798 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced -0.22 0.138207618 -0.030405676 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed -0.13 0.106805919 0.013884769 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.05 0.12142317 0.006071159 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -0.05 0.105462099 -0.005273105 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced -0.084 0.109965459 -0.009237099 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 induced -0.164 0.122838872 -0.020145575 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -0.057 0.114162621 0.006507269 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 repressed 0.454 0.096967886 -0.04402342 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(2) 87 induced -0.029 0.136201456 -0.003949842 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -0.164 0.11395211 0.018688146 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.811 0.127894884 -0.103722751 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.622 0.144225168 -0.089708055 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.089 0.107759055 -0.009590556 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.059 0.132508869 -0.007818023 12. Expression in tup1-deleted cells(1) 96 induced -0.201 0.167597554 -0.033687108 13. Expression in cells overexpressing Yap1p(1) 97 induced 0.422 0.103954444 0.043868775 14. Galactose-induced expression in med2-deleted cells(1) 98 repressed -0.202 0.113773338 0.022982214 15. evolved strain 1 versus evolved strain 1(1) 99 repressed 0.01 0.10459578 -0.001045958 16. parental strain versus evolved strain 1(1) 100 induced -0.92 0.126285474 -0.116182636 17. parental strain versus evolved strain 2(1) 101 induced -0.45 0.131083364 -0.058987514 18. parental strain versus evolved strain 3(1) 102 bimodal -0.74 0.170543316 -0.126202054 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.146810586 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.117202203 0 27. Young: Expression in rpb1 mutant(1) 111 repressed -1.069 0.157513536 0.16838197 28. Young: Expression in srb4 mutant(1) 112 repressed -1.069 0.138531087 0.148089732 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.167912155 0 31. Young: Expression in srb10 mutant(1) 115 induced -0.225 0.189316654 -0.042596247 32. Young: Expression in swi2 mutant(1) 116 induced 0.215 0.13714059 0.029485227 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.17386109 0 34. Young: Expression in taf17 mutant(1) 118 bimodal -0.092 0.102819735 -0.009459416 35. Young: Expression in tfa1 mutant(1) 119 repressed -1.176 0.11896938 0.139907991 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.134765683 0 37. Young: Expression in gcn5 mutant(1) 121 induced 0 0.130287995 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(2) 123 induced -0.065 0.115545183 -0.007510437 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(3) 124 induced 0.623 0.153822349 0.095831323 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced 0.118 0.118064787 0.013931645 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(6) 127 induced 0.918 0.115068615 0.105632988 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(7) 128 induced 0.54 0.109508028 0.059134335 39. Young: Expression in sir2 deletion mutant(1) 129 induced -0.118 0.142820668 -0.016852839 40. Young: Expression in sir3 deletion mutant(1) 130 induced -0.133 0.122254481 -0.016259846 42. Young: Expression in rap1 deletion mutant(1) 132 repressed 0.463 0.103395258 -0.047872004 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed -0.986 0.149689134 0.147593486 44. Expression in snf2 mutant cells in YPD(1) 134 induced 1.837 0.095592793 0.175603961 45. Expression in snf2 mutant cells in minimal medium(1) 135 induced -0.043 0.137440721 -0.005909951 46. Expression in swi1 mutant cells in YPD(1) 136 induced -0.595 0.099246173 -0.059051473 47. Expression in swi1 mutant cells in minimal medium(1) 137 bimodal -0.133 0.112418783 -0.014951698 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(2) 139 repressed -0.023 0.098051718 0.00225519 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(3) 140 repressed -0.038 0.174654126 0.006636857 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(4) 141 repressed -0.004 0.182454724 0.000729819 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(5) 142 repressed -0.01 0.215744025 0.00215744 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(6) 143 repressed -0.023 0.205869586 0.004735 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(7) 144 repressed -0.092 0.201222928 0.018512509 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(8) 145 repressed -0.029 0.211395164 0.00613046 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(2) 147 repressed -0.045 0.209324589 0.009419607 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(3) 148 repressed -0.037 0.223984317 0.00828742 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(4) 149 repressed -0.038 0.168261763 0.006393947 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 repressed -0.019 0.153519417 0.002916869 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(6) 151 repressed -0.124 0.163725261 0.020301932 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 bimodal -0.041 0.123234223 -0.005052603 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 repressed -0.025 0.202269417 0.005056735 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(2) 154 repressed -0.145 0.175221247 0.025407081 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(3) 155 repressed -0.045 0.178317308 0.008024279 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 repressed -0.026 0.216623413 0.005632209 52. Expression in response to 50 nM alpha-factor in fus3 deletion mutant 30 min(1) 157 repressed 0.083 0.171680358 -0.01424947 53. Expression in response to overproduction of Ste4p(1) 158 repressed -0.044 0.147600822 0.006494436 54. Expression in response to overproduction of Ste5p(1) 159 repressed 0.027 0.219277446 -0.005920491 55. Expression in response to overproduction of Ste11p(1) 160 repressed 0.035 0.167492065 -0.005862222 56. Expression in response to overproduction of Ste12p(1) 161 repressed 0.312 0.173596434 -0.054162087 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 repressed 0.021 0.103748133 -0.002178711 58. Expression in rst1 rst2 double deletion mutant cells(1) 163 repressed -0.02 0.106570668 0.002131413 59. Expression in sst2 deletion mutant cells(1) 164 repressed 0.106 0.114626587 -0.012150418 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.015 0.145245986 0.00217869 61. Expression in response to alpha-factor in rst1 rst2 double deletion mutant cells(1) 166 repressed -0.087 0.155411688 0.013520817 62. Expression in response to osmotic shock in hog1 deletion mutant cells(1) 167 induced 0.526 0.101041822 0.053147999 63. Expression in response to alpha-factor in fus3 loss-of-function mutant cells(1) 168 induced -0.031 0.121750373 -0.003774262 66. Expression in ste5 deletion mutant cells(1) 171 induced -0.03 0.123511482 -0.003705344 67. Expression in ste7 deletion mutant cells(1) 172 repressed 0.092 0.100008869 -0.009200816 68. Expression in ste11 deletion mutant cells(1) 173 induced -0.022 0.107160194 -0.002357524 69. Expression in ste12 deletion mutant cells(1) 174 repressed 0.03 0.111379294 -0.003341379 70. Expression in ste18 deletion mutant cells(1) 175 repressed 0.123 0.116702763 -0.01435444 71. Expression in bni1 deletion mutant cells(1) 176 induced -0.017 0.116523058 -0.001980892 72. Expression in response to overproduction of activated Bni1p(1) 177 induced -0.005 0.122786128 -0.000613931 73. Expression in response to overproduction of activated Pkc1p(1) 178 bimodal -0.123 0.119961258 -0.014755235 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 bimodal 0.099 0.128662715 0.012737609 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(1) 181 repressed -0.046 0.102115385 0.004697308 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(2) 182 repressed 0.03 0.137991038 -0.004139731 77. Expression in tec1 deletion mutant cells(1) 183 induced 0.024 0.136961819 0.003287084 78. Expression in kss1 deletion mutant cells(1) 184 induced 0.005 0.122768857 0.000613844 79. Expression in fus3 deletion mutant cells(1) 185 repressed 0.009 0.128658047 -0.001157922 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.003 0.106442774 0.000319328 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed -0.053 0.146518857 0.007765499 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed 0.059 0.204573842 -0.012069857 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.072 0.134094473 0.009654802 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced -0.083 0.157943895 -0.013109343 87. Expression in response to a-factor in wild-type alpha cells(1) 193 repressed -0.125 0.214191561 0.026773945 88. Expression in response to DNA damage by MMS(1) 194 bimodal 0 0.117602222 0 92. Expression in cna1 cna2 double mutant cells(1) 198 repressed 0.313 0.13959438 -0.043693041 94. Expression in response to 1ug/mL FK506(1) 200 bimodal 0.301 0.13826363 0.041617353 96. Heat-shock induced expression in med2 deleted cells(1) 202 repressed 0.644 0.114785288 -0.073921725 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 repressed 0 0.133742065 0 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 bimodal 0 0.116481049 0 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced -0.432 0.107830937 -0.046582965 100. Young: Expression in spt20 deletion mutant(1) 206 repressed -0.721 0.106048357 0.076460865 101. Young: Expression in spt3 deletion mutant(1) 207 repressed -0.633 0.099222834 0.062808054 102. Young: Expression in taf25_2 deletion mutant(1) 208 bimodal 0 0.143912901 0 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0.356 0.140385549 0.049977255 104. Young: Expression in taf61 deletion mutant(1) 210 induced -0.122 0.148493745 -0.018116237 106. Young: Expression in tsm1 deletion mutant(1) 212 induced -0.038 0.140161968 -0.005326155 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(1) 213 induced 0 0.098587565 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.177143857 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0 0.133462472 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(4) 216 bimodal 0 0.097927558 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0 0.122534074 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(9) 221 induced 0 0.09904593 0 108. Rosetta 2000: Expression in ade1 deletion mutant (1) 227 repressed 0.06 0.101052091 -0.006063125 110. Rosetta 2000: Expression in ade2 (haploid) deletion mutant (1) 229 induced -0.106 0.10892037 -0.011545559 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced -0.066 0.128648712 -0.008490815 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced -0.123 0.162958831 -0.020043936 113. Rosetta 2000: Expression in ald5 deletion mutant (1) 232 repressed 0.027 0.102794996 -0.002775465 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced -0.093 0.1275014 -0.01185763 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed 0.063 0.109985997 -0.006929118 119. Rosetta 2000: Expression in arg5,6 deletion mutant (1) 238 repressed 0.209 0.117326363 -0.02452121 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 repressed 0.113 0.183812547 -0.020770818 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced -0.209 0.140620332 -0.029389649 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced 0.043 0.126027353 0.005419176 126. Rosetta 2000: Expression in bub2 deletion mutant (1) 245 induced -0.076 0.108936706 -0.00827919 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.395 0.125166636 0.049440821 128. Rosetta 2000: Expression in bub3 (haploid **2) deletion mutant (1) 247 bimodal 0.213 0.127548544 0.02716784 129. Rosetta 2000: Expression in bul1 deletion mutant (1) 248 induced -0.033 0.108357916 -0.003575811 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.083 0.133862491 0.011110587 133. Rosetta 2000: Expression in cin5 deletion mutant (1) 252 repressed -0.223 0.117785194 0.026266098 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 induced 0.189 0.103471807 0.019556172 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal -0.083 0.162052838 -0.013450386 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced -0.329 0.116322816 -0.038270206 139. Rosetta 2000: Expression in cmk2 deletion mutant (1) 258 induced -0.053 0.123565161 -0.006548954 141. Rosetta 2000: Expression in cnb1 deletion mutant (1) 260 induced -0.083 0.095919063 -0.007961282 142. Rosetta 2000: Expression in cue1 deletion mutant (1) 261 induced -0.03 0.104295183 -0.003128855 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 bimodal 0.183 0.134214432 0.024561241 146. Rosetta 2000: Expression in dfr1 deletion mutant (1) 265 induced -0.173 0.12582711 -0.02176809 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed 0.003 0.123539488 -0.000370618 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 bimodal 0.88 0.113286968 0.099692532 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed -0.103 0.128204817 0.013205096 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.126 0.146464246 0.018454495 153. Rosetta 2000: Expression in ecm1 (**3) deletion mutant (1) 272 induced -0.023 0.112131721 -0.00257903 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced -0.09 0.143511016 -0.012915991 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 repressed 0 0.108338779 0 158. Rosetta 2000: Expression in ecm34 deletion mutant (1) 277 induced -0.027 0.137851942 -0.003722002 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.316 0.109034261 0.034454826 160. Rosetta 2000: Expression in erd1 deletion mutant (1) 279 induced -0.133 0.099288181 -0.013205328 161. Rosetta 2000: Expression in erg2 deletion mutant (1) 280 induced 0.326 0.120318335 0.039223777 162. Rosetta 2000: Expression in erg3 (haploid) deletion mutant (1) 281 repressed -0.083 0.167884615 0.013934423 163. Rosetta 2000: Expression in erg4 (haploid **7) deletion mutant (1) 282 bimodal -0.017 0.117783794 -0.002002324 164. Rosetta 2000: Expression in erg5 deletion mutant (1) 283 repressed -0.1 0.100715553 0.010071555 166. Rosetta 2000: Expression in erp2 deletion mutant (1) 285 repressed 0.01 0.145749627 -0.001457496 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced -0.007 0.145731423 -0.00102012 171. Rosetta 2000: Expression in fre6 deletion mutant (1) 290 repressed 0.066 0.109752147 -0.007243642 172. Rosetta 2000: Expression in fus2 deletion mutant (1) 291 induced 0.08 0.110231516 0.008818521 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 repressed 0.03 0.128658047 -0.003859741 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 bimodal 0.043 0.117663368 0.005059525 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced 0.233 0.112994305 0.026327673 177. Rosetta 2000: Expression in gcn4 deletion mutant (1) 296 induced -0.043 0.136061893 -0.005850661 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced -0.073 0.097915422 -0.007147826 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced -0.04 0.137196602 -0.005487864 182. Rosetta 2000: Expression in hat2 deletion mutant (1) 301 induced -0.14 0.121037621 -0.016945267 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 bimodal 0.123 0.113445668 0.013953817 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced -0.209 0.11790422 -0.024641982 187. Rosetta 2000: Expression in his1 deletion mutant (1) 306 induced -0.013 0.132791262 -0.001726286 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 bimodal -0.07 0.125691281 -0.00879839 189. Rosetta 2000: Expression in hog1 (haploid) deletion mutant (1) 308 induced -0.226 0.11550224 -0.026103506 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced -0.11 0.136423637 -0.0150066 192. Rosetta 2000: Expression in hst3 deletion mutant (1) 311 induced -0.316 0.102865945 -0.032505639 194. Rosetta 2000: Expression in imp2 (**12) deletion mutant (1) 313 bimodal -0.209 0.106672423 -0.022294537 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced 0.076 0.114063667 0.008668839 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 induced -0.057 0.104817961 -0.005974624 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 repressed -0.066 0.105174571 0.006941522 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced -0.043 0.117362771 -0.005046599 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced 0.143 0.129886576 0.01857378 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced -0.01 0.150810306 -0.001508103 203. Rosetta 2000: Expression in mac1 deletion mutant (1) 322 induced 0.04 0.104058999 0.00416236 204. Rosetta 2000: Expression in mad2 deletion mutant (1) 323 induced 0.023 0.106320015 0.00244536 206. Rosetta 2000: Expression in mbp1 deletion mutant (1) 325 induced 0.236 0.101669623 0.023994031 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed 0.179 0.102191934 -0.018292356 208. Rosetta 2000: Expression in mnn1 deletion mutant (1) 327 induced -0.01 0.098095594 -0.000980956 210. Rosetta 2000: Expression in mrt4 deletion mutant (1) 329 repressed -0.057 0.098067121 0.005589826 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.04 0.141878734 0.005675149 213. Rosetta 2000: Expression in nrf1 deletion mutant (1) 332 induced -0.01 0.110699683 -0.001106997 217. Rosetta 2000: Expression in pau2 deletion mutant (1) 336 repressed -0.216 0.104866972 0.022651266 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 induced -0.1 0.136428771 -0.013642877 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced 0.05 0.099980396 0.00499902 225. Rosetta 2000: Expression in pfd2 (**14) deletion mutant (1) 344 repressed -0.219 0.101112771 0.022143697 227. Rosetta 2000: Expression in ppr1 deletion mutant (1) 346 repressed -0.12 0.111590273 0.013390833 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 induced 0.12 0.165735157 0.019888219 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 induced 0.043 0.106780713 0.004591571 232. Rosetta 2000: Expression in rad6 (haploid) deletion mutant (1) 351 induced -0.116 0.097680639 -0.011330954 233. Rosetta 2000: Expression in ras1 deletion mutant (1) 352 repressed 0.116 0.101907674 -0.01182129 236. Rosetta 2000: Expression in rgt1 deletion mutant (1) 355 induced 0.136 0.108604369 0.014770194 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal 0.242 0.107925224 0.026117904 238. Rosetta 2000: Expression in rml2 (**13) deletion mutant (1) 357 repressed 0.06 0.10415422 -0.006249253 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.518 0.128181945 0.066398248 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced -0.561 0.116536128 -0.065376768 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed 0.04 0.156142644 -0.006245706 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed -0.209 0.128118465 0.026776759 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed 0.053 0.127446322 -0.006754655 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.093 0.122293689 -0.011373313 249. Rosetta 2000: Expression in rps24a (haploid) deletion mutant (1) 368 repressed -0.133 0.114990665 0.015293758 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed -0.253 0.14793736 0.037428152 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.036 0.157775392 0.005679914 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced -0.246 0.174514563 -0.042930583 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced -0.123 0.099733943 -0.012267275 256. Rosetta 2000: Expression in sap18 deletion mutant (1) 375 induced 0.073 0.115960605 0.008465124 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.066 0.180432692 -0.011908558 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.11 0.128811146 0.014169226 261. Rosetta 2000: Expression in sgs1 deletion mutant (1) 380 induced -0.03 0.09698329 -0.002909499 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced -0.083 0.13998273 -0.011618567 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced -0.176 0.122032767 -0.021477767 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced 0.02 0.102305358 0.002046107 267. Rosetta 2000: Expression in sir3 deletion mutant (1) 386 induced 0.057 0.137034167 0.007810948 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed -0.316 0.100415422 0.031731273 269. Rosetta 2000: Expression in sod1 (haploid) deletion mutant (1) 388 bimodal -0.289 0.106145444 -0.030676033 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced 0.302 0.100976942 0.030495036 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced -0.93 0.137021565 -0.127430055 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 repressed 0.352 0.114626587 -0.040348559 274. Rosetta 2000: Expression in ste11 (haploid) deletion mutant (1) 393 induced -0.073 0.107160194 -0.007822694 275. Rosetta 2000: Expression in ste12 (haploid) deletion mutant (1) 394 repressed 0.1 0.111379294 -0.011137929 276. Rosetta 2000: Expression in ste18 (haploid) deletion mutant (1) 395 repressed 0.219 0.125761296 -0.027541724 277. Rosetta 2000: Expression in ste2 (haploid) deletion mutant (1) 396 induced -0.02 0.104877707 -0.002097554 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 repressed -0.013 0.133297237 0.001732864 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced -0.1 0.123511482 -0.012351148 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 bimodal 0.253 0.11348581 0.02871191 284. Rosetta 2000: Expression in swi5 deletion mutant (1) 403 repressed 0.09 0.111913275 -0.010072195 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.355 0.156363424 0.055509016 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.057 0.141993092 0.008093606 287. Rosetta 2000: Expression in tom6 deletion mutant (1) 406 repressed -0.036 0.101632282 0.003658762 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 bimodal 0.113 0.134365198 0.015183267 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.993 0.192871546 0.191521445 291. Rosetta 2000: Expression in ubp8 deletion mutant (1) 410 induced -0.103 0.129453417 -0.013333702 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 repressed 0.046 0.097542009 -0.004486932 293. Rosetta 2000: Expression in ubr2 deletion mutant (1) 412 repressed 0.1 0.123047517 -0.012304752 294. Rosetta 2000: Expression in utr4 deletion mutant (1) 413 induced 0.06 0.099950523 0.005997031 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced -0.073 0.193031647 -0.01409131 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.083 0.119967793 0.009957327 297. Rosetta 2000: Expression in vps21 deletion mutant (1) 416 induced -0.02 0.10379621 -0.002075924 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 induced 0.043 0.114746546 0.004934101 303. Rosetta 2000: Expression in yap3 deletion mutant (1) 422 induced -0.525 0.122962099 -0.064555102 304. Rosetta 2000: Expression in yap7 deletion mutant (1) 423 induced -0.106 0.098637043 -0.010455527 308. Rosetta 2000: Expression in yel001c deletion mutant (1) 427 repressed -0.027 0.110008402 0.002970227 310. Rosetta 2000: Expression in yel010w deletion mutant (1) 429 repressed -0.03 0.119410941 0.003582328 311. Rosetta 2000: Expression in yel020c deletion mutant (1) 430 repressed -0.04 0.104198096 0.004167924 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed 0.203 0.144368465 -0.029306798 318. Rosetta 2000: Expression in yer002w deletion mutant (1) 437 repressed -0.1 0.110290329 0.011029033 322. Rosetta 2000: Expression in yer034w deletion mutant (1) 441 induced -0.053 0.100349608 -0.005318529 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.07 0.11628174 0.008139722 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced -0.16 0.113757468 -0.018201195 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 bimodal 0.106 0.135962939 0.014412072 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced 0.076 0.114971994 0.008737872 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.063 0.098103062 0.006180493 334. Rosetta 2000: Expression in yhl029c deletion mutant (1) 453 repressed -0.05 0.143381721 0.007169086 336. Rosetta 2000: Expression in yhl045w deletion mutant (1) 455 bimodal 0.033 0.116749907 0.003852747 337. Rosetta 2000: Expression in yhr011w (**14) deletion mutant (1) 456 repressed -0.06 0.12199776 0.007319866 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.05 0.141381628 -0.007069081 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 induced -0.08 0.128137603 -0.010251008 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced -0.083 0.168447069 -0.013981107 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed -0.053 0.10245519 0.005430125 347. Rosetta 2000: Expression in yml011c deletion mutant (1) 466 repressed -0.01 0.113932506 0.001139325 351. Rosetta 2000: Expression in ymr009w deletion mutant (1) 470 repressed -0.007 0.097342233 0.000681396 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.01 0.163624907 -0.001636249 356. Rosetta 2000: Expression in ymr030w deletion mutant (1) 475 induced -0.179 0.107356236 -0.019216766 358. Rosetta 2000: Expression in ymr031w-a deletion mutant (1) 477 repressed 0.063 0.152338499 -0.009597325 359. Rosetta 2000: Expression in ymr034c deletion mutant (1) 478 repressed 0.03 0.116602409 -0.003498072 361. Rosetta 2000: Expression in ymr041c deletion mutant (1) 480 induced -0.08 0.099123413 -0.007929873 362. Rosetta 2000: Expression in ymr044w deletion mutant (1) 481 repressed -0.046 0.098902166 0.0045495 365. Rosetta 2000: Expression in ymr145c deletion mutant (1) 484 repressed 0.013 0.098541355 -0.001281038 368. Rosetta 2000: Expression in ymr237w deletion mutant (1) 487 repressed 0.013 0.096399365 -0.001253192 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced -0.007 0.112601288 -0.000788209 378. Rosetta 2000: Expression in yor021c deletion mutant (1) 497 induced 0.017 0.107713312 0.001831126 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed -0.066 0.121743839 0.008035093 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed -0.12 0.142521471 0.017102577 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.412 0.182445388 -0.0751675 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced -0.176 0.14559186 -0.025624167 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 bimodal 0.036 0.146079164 0.00525885 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced -0.146 0.183087192 -0.02673073 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced -0.173 0.143544156 -0.024833139 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced 0.176 0.152966299 0.026922069 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced 0.027 0.162097181 0.004376624 394. Rosetta 2000: Expression in cells with YEF3 under tet promoter(1) 513 repressed -0.1 0.105971807 0.010597181 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed 0.06 0.112979369 -0.006778762 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0 0.130039675 0 399. Rosetta 2000: Expression in response to FR901,228(1) 518 repressed -0.933 0.111507655 0.104036642 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced 0.143 0.114179892 0.016327725 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.007 0.147852409 -0.001034967 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 bimodal 0.076 0.100742158 0.007656404 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced -0.219 0.13339059 -0.029212539 404. Rosetta 2000: Expression in response to MMS(1) 523 induced -0.801 0.119411875 -0.095648912 405. Rosetta 2000: Expression in response to Nikkomycin Z(1) 524 induced 0.342 0.100828977 0.03448351 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.16 0.124234503 0.019877521 407. Rosetta 2000: Expression in response to Tunicamycin(1) 526 induced -0.14 0.100173637 -0.014024309 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 bimodal -0.58 0.12298637 -0.071332095 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 bimodal 0.01 0.153832151 0.001538322 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(3) 529 induced 0.01 0.143736931 0.001437369 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0.26 0.12350168 -0.032110437 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(5) 531 repressed 0.01 0.115154033 -0.00115154 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(6) 532 repressed -0.1 0.117625093 0.011762509 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 repressed 0.65 0.137910288 -0.089641687 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(9) 535 induced 0.06 0.119255508 0.00715533 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 induced -0.03 0.160565721 -0.004816972 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(12) 538 repressed 0.35 0.137222741 -0.048027959 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 bimodal -0.68 0.155285661 -0.105594249 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(2) 541 induced -0.29 0.116597274 -0.033813209 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 induced 0.05 0.145119492 0.007255975 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.04 0.121255134 0.004850205 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(6) 545 repressed -0.04 0.108331311 0.004333252 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(11) 550 induced -0.06 0.096636016 -0.005798161 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(12) 551 repressed -0.01 0.109472554 0.001094726 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(13) 552 repressed 0.16 0.118939507 -0.019030321 Expression in PDR1-3 mutant(1) 555 repressed 0.322 0.134220034 -0.043218851 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(2) 558 induced 0 0.108265963 0 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(3) 559 induced 0.298 0.097948096 0.029188532 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(4) 560 induced 0.305 0.120661408 0.036801729 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(1) 571 induced 0.047 0.09854649 0.004631685 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(2) 572 induced 0.113 0.10870519 0.012283687 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(5) 575 induced 0.648 0.100347741 0.065025336 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(6) 576 induced 0.759 0.115846714 0.087927656 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced 0.322 0.120227315 0.038713195 Low-Pi vs High-Pi in WT (NBW7) exp2(1) 578 induced 0 0.11802978 0 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced -0.105 0.122961632 -0.012910971 pho80 vs WT(1) 581 induced -0.943 0.11973581 -0.112910869 PHO81c vs WT exp1(1) 583 induced 0.111 0.112931292 0.012535373 PHO81c vs WT exp2(1) 584 induced -0.184 0.150323002 -0.027659432 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced -0.171 0.162796397 -0.027838184 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced -0.754 0.145271658 -0.10953483 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 0.091 0.132418783 0.012050109 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced 0.027 0.162560213 0.004389126 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced -0.123 0.170057412 -0.020917062 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced -0.068 0.115648338 -0.007864087 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced 0 0.138111931 0 436. Expression in wild type versus strain MS221 under steady state conditions in YPD(1) 593 bimodal -0.002 0.127684373 -0.000255369 437. Expression in wild type versus strain PH2 (ure2 deletion) under steady state conditions in YPD(1) 594 induced 0.006 0.129716673 0.0007783 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced -0.186 0.151918409 -0.028256824 440. Expression in strain TS19-4c in response to 30 min 50 nM treatment with rapamycin in YPD(1) 597 induced 0.061 0.103572162 0.006317902 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0.223 0.160294529 0.03574568 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 0.17 0.160866785 0.027347353 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced 0.017 0.165870052 0.002819791 450. Expression in response to low MNNG (8 microgram/ml) for 60 min(1) 607 induced -0.418 0.111020351 -0.046406507 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced -0.595 0.114389937 -0.068062012 455. Expression in response to high MNNG (27 microgram/ml) for 60 min(1) 612 induced -0.051 0.095516243 -0.004871328 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed 0.173 0.141376494 -0.024458133 465. Expression in rpd3 deletion(1) 622 induced -0.727 0.129086072 -0.093845574 466. Expression in rpd3 deletion(1) 623 induced -1.062 0.098196882 -0.104285089 467. Expression in sin3 deletion(1) 624 induced -0.619 0.103595967 -0.064125904 469. Expression in hda1 deletion(1) 626 induced 0.583 0.155873786 0.090874417 470. Expression in hda1 deletion(1) 627 induced 0.586 0.139332058 0.081648586 472. Expression in sap3 deletion(1) 629 induced 0 0.118058252 0 473. Expression in ume6 deletion(1) 630 induced 0 0.134832431 0 474. Expression in hda1 deletion(1) 631 induced 0 0.136615011 0 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(2) 635 induced 0 0.125579257 0 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced 0 0.140031273 0 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced 0 0.124612584 0 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced -1.887 0.125981143 -0.237726416 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced 1.156 0.114864171 0.132782982 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced -1.675 0.105081217 -0.176011039 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -1.962 0.147063107 -0.288537816 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 induced 1.155 0.14386109 0.166159559 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.043 0.161953883 -0.1689179 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 bimodal -1.376 0.106488051 -0.146527558 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced 1.096 0.110449496 0.121052647 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed -1.057 0.117928491 0.124650415 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 induced -0.833 0.111039488 -0.092495894 481. Expression in response to heat shock: 15,30,45,60,120 min(2) 653 repressed -0.338 0.125456497 0.042404296 481. Expression in response to heat shock: 15,30,45,60,120 min(3) 654 repressed -0.536 0.114867438 0.061568947 481. Expression in response to heat shock: 15,30,45,60,120 min(4) 655 repressed -0.671 0.104425411 0.070069451 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced 0.358 0.132710978 0.04751053 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0.52 0.103811613 0.053982039 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 induced 0.116 0.104388069 0.012109016 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 induced 0.546 0.120352409 0.065712415 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 0.625 0.102737117 0.064210698 482. Expression in response to acid: 10,20,40,60,80,100 min(6) 662 induced 0.361 0.118060586 0.042619872 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced 0.758 0.115952203 0.08789177 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 induced 0.566 0.095823376 0.054236031 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0.62 0.122090179 0.075695911 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced -0.111 0.123462472 -0.013704334 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced -0.172 0.110209578 -0.018956047 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0.27 0.109490758 0.029562505 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0.262 0.121516524 0.031837329 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced -0.113 0.101269137 -0.011443413 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 0 0.115938667 0 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 induced 0 0.108629108 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced 0 0.11660941 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 0 0.128394791 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 induced 0 0.119560773 0 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced -0.37 0.154791355 -0.057272802 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -0.61 0.157806199 -0.096261781 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced -0.24 0.152566748 -0.036616019 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0.03 0.156444175 0.004693325 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced -0.41 0.156265403 -0.064068815 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced -0.47 0.132354836 -0.062206773 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 induced 0.22 0.120888723 0.026595519 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.23 0.155411221 0.035744581 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed 0.15 0.152862211 -0.022929332 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.22 0.161220594 0.035468531 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.41 0.13909354 0.057028351 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed 0.2 0.127936426 -0.025587285 503. Brown enviromental changes :37C to 25C shock - 15 min(1) 701 repressed -0.25 0.099663928 0.024915982 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed 0.14 0.117194268 -0.016407198 505. Brown enviromental changes :37C to 25C shock - 45 min(1) 703 repressed 0.86 0.125381348 -0.107827959 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced 0.04 0.105202577 0.004208103 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced -0.06 0.149054798 -0.008943288 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 0.18 0.166929612 0.03004733 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 0.09 0.170215646 0.015319408 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.15 0.162587285 0.024388093 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced 0.37 0.147154126 0.054447027 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced -0.06 0.144237771 -0.008654266 516. Brown enviromental changes :33C vs. 30C - 90 minutes(1) 714 induced 0.23 0.102119119 0.023487397 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced -0.03 0.146670556 -0.004400117 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced 0.18 0.129267177 0.023268092 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed 0.04 0.114643391 -0.004585736 520. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 5 minutes(1) 718 induced 0.29 0.102362304 0.029685068 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced -0.18 0.127389376 -0.022930088 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced 0.34 0.103739731 0.035271509 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 0.39 0.10926671 0.042614017 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0.1 0.123789675 0.012378968 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.03 0.132311893 0.003969357 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced -0.25 0.118999253 -0.029749813 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced -0.29 0.121879201 -0.035344968 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.23 0.152170463 -0.034999206 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced -0.42 0.126229929 -0.05301657 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 repressed -0.22 0.096249066 0.021174795 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced -0.01 0.100653006 -0.00100653 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 induced -0.14 0.101348021 -0.014188723 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 0.1 0.101804052 0.010180405 546. Brown enviromental changes :2.5mM DTT 060 min dtt-1(1) 744 induced -0.14 0.11848581 -0.016588013 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 induced -0.1 0.109487491 -0.010948749 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 induced -0.29 0.116943148 -0.033913513 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 repressed 0.33 0.122543409 -0.040439325 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed 0.32 0.129655527 -0.041489768 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed 0.07 0.11839059 -0.008287341 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 induced 0.01 0.109043129 0.001090431 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced -0.04 0.158032114 -0.006321285 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced 0.44 0.115727222 0.050919978 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced 0.04 0.18793876 0.00751755 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.01 0.173037248 -0.001730372 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced -0.06 0.155879388 -0.009352763 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced -0.1 0.165287061 -0.016528706 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced 0.19 0.151297143 0.028746457 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.01 0.14989031 -0.001498903 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced -0.04 0.128304705 -0.005132188 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced 0.3 0.137989638 0.041396891 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.21 0.131574869 0.027630723 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced 0.58 0.128336912 0.074435409 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced 0.24 0.118659447 0.028478267 569. Brown enviromental changes :1M sorbitol - 60 min(1) 767 induced 0.26 0.103760269 0.02697767 570. Brown enviromental changes :1M sorbitol - 90 min(1) 768 induced 0.26 0.10228202 0.026593325 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed -0.01 0.13226755 0.001322676 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed -0.18 0.102600355 0.018468064 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed -0.12 0.135234783 0.016228174 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed 0.12 0.107258682 -0.012871042 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced -0.42 0.104913181 -0.044063536 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.45 0.115962472 0.052183112 581. Brown enviromental changes :aa starv 4 h(1) 779 induced 0.11 0.151400299 0.016654033 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.06 0.112854276 0.006771257 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed 0.37 0.102051904 -0.037759205 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed 0.07 0.116252801 -0.008137696 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 induced 0.48 0.11192401 0.053723525 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 bimodal 0.92 0.111856329 0.102907823 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 1.26 0.133520351 0.168235642 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 0.86 0.152489731 0.131141169 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 1 0.140019137 0.140019137 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 0.99 0.135495239 0.134140287 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 1.48 0.116957151 0.173096583 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 0.92 0.12068708 0.111032114 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 1.16 0.114518764 0.132841766 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced -0.42 0.123030246 -0.051672704 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced 0.01 0.153778473 0.001537785 612. Brown enviromental changes :YPD stationary phase 4 h ypd-1(1) 803 induced 0.08 0.104069735 0.008325579 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.25 0.123806012 -0.030951503 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.39 0.148609037 0.057957524 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.57 0.161868932 0.092265291 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.96 0.140189507 0.134581927 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 1.37 0.14110997 0.193320659 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced -0.04 0.128583831 -0.005143353 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 0.37 0.132252614 0.048933467 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 0.7 0.144833364 0.101383355 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 0.77 0.119496359 0.092012197 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 0.96 0.102397311 0.098301419 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced 0.35 0.125318335 0.043861417 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.29 0.125533981 0.036404854 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal 0.48 0.150526512 0.072252726 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced -0.25 0.120719287 -0.030179822 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced 0.99 0.103817681 0.102779504 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0 0.099633122 0 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced 0.01 0.109423077 0.001094231 636. Brown enviromental changes :ethanol car-1(1) 827 induced 1.04 0.144508028 0.15028835 637. Brown enviromental changes :galactose car-1(1) 828 induced -0.04 0.105962472 -0.004238499 638. Brown enviromental changes :glucose car-1(1) 829 repressed 0.76 0.117938294 -0.089633103 639. Brown enviromental changes :mannose car-1(1) 830 repressed 0.28 0.12131068 -0.03396699 641. Brown enviromental changes :sucrose car-1(1) 832 repressed 0.93 0.127675971 -0.118738653 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.81 0.118686987 0.096136459 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed 0.04 0.160345874 -0.006413835 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed -0.49 0.149260642 0.073137715 647. Brown enviromental changes :YP raffinose vs reference pool car-2(1) 838 induced -0.15 0.107229276 -0.016084391 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed 0.1 0.132614824 -0.013261482 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.1 0.129042196 0.01290422 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed 0.03 0.119027259 -0.003570818 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced -0.01 0.141338219 -0.001413382 658. Brown enviromental changes :steady state 29 dec C ct-2(1) 849 repressed 0.21 0.099588312 -0.020913546 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced 0.5 0.10314227 0.051571135 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0.91 0.127483196 0.116009709 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 induced 0.791 0.128143671 0.101361643 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.575 0.166378827 0.095667826 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 repressed -1.131 0.156575336 0.177086705 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 repressed -0.774 0.149159821 0.115449701 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed 0.124 0.135974141 -0.016860794 681. Expression in response to 0.4M NaCl for 10 min in wild type(1) 869 induced 1.137 0.096745239 0.109999337 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 1.585 0.137842606 0.218480531 (Rich Media 2% Glucose YPD-185769) wt 5mM aF, 30 min. 876 repressed 0.05 0.156426904 -0.007821345 Rich Media 2% Glucose YPD-Average wt 5mM aF, 30 min. 877 repressed -0.23 0.145068148 0.033365674 (Rich Media 2% Glucose YPD-185387) fus3 5mM aF, 30 min. 879 repressed 0.3 0.105864918 -0.031759475 (Rich Media 2% Glucose YPD-185440) fus3 5mM aF, 30 min. 880 repressed -0.1 0.096067028 0.009606703 Rich Media 2% Glucose YPD-Average fus3 5mM aF, 30 min. 881 repressed 0.1 0.110654873 -0.011065487 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 repressed -0.48 0.137532207 0.066015459 (Rich Media 2% Glucose YPD-185264) kss1 5mM aF, 30 min. 884 repressed -0.5 0.106808719 0.05340436 Rich Media 2% Glucose YPD-Average kss1 5mM aF, 30 min. 885 repressed -0.49 0.138791075 0.068007627 ( trp- 2% Glucose-228688) wt 5mM aF, 30 min. 907 repressed 0.66 0.148790142 -0.098201494 ( trp- 2% Glucose-228721) wt 5mM aF, 30 min. 908 repressed -0.21 0.158765403 0.033340735 trp- 2% Glucose-Average wt 5mM aF, 30 min. 909 repressed 0.23 0.165612397 -0.038090851 Addition of 1M NaCl (10) 915 induced -0.49 0.098534354 -0.048281833 Addition of 1M NaCl (30) 916 induced 1.5 0.113866225 0.170799337 Addition of 1M NaCl (90) 917 bimodal 2.38 0.162031367 0.385634653 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced 1.204 0.134166822 0.161536854 DES460 + 0.02% MMS - 5 min 919 induced -0.154 0.106263069 -0.016364513 DES460 + 0.02% MMS - 15 min 920 induced -0.23 0.103708458 -0.023852945 DES460 + 0.2% MMS - 45 min 922 induced -0.197 0.101007282 -0.019898434 DES460 + 0.02% MMS - 60 min 923 induced -0.279 0.099671863 -0.02780845 DES460 + 0.02% MMS - 90 min 924 induced -0.362 0.12115618 -0.043858537 DES460 + 0.02% MMS - 120 min 925 induced -0.342 0.114987397 -0.03932569 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed 0.02 0.133832618 -0.002676652 DES459 (mec1-) + 0.02% MMS - 30 min 928 repressed 0.087 0.105678678 -0.009194045 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.025 0.116987491 0.002924687 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed 0.011 0.130765497 -0.00143842 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed 0.005 0.13871686 -0.000693584 dun1- + 0.02% MMs - 30 min 933 induced -0.28 0.099768484 -0.027935176 dun1- + 0.02% MMS - 90 min 934 repressed -0.38 0.121962752 0.046345846 dun1- + 0.02% MMS - 120 min 935 repressed -0.45 0.124239638 0.055907837 wt_plus_gamma_5_min 936 induced 0.164 0.139925784 0.022947829 wt_plus_gamma_10_min 937 induced -0.297 0.170012603 -0.050493743 wt_plus_gamma_20_min 938 induced -0.11 0.134885642 -0.014837421 wt_plus_gamma_30_min 939 bimodal -0.334 0.111279873 -0.037167478 wt_plus_gamma_45_min 940 repressed -0.49 0.104194828 0.051055466 wt_plus_gamma_60_min 941 repressed -0.465 0.124322722 0.057810066 wt_plus_gamma_90_min 942 induced -0.243 0.110425691 -0.026833443 DES460 (wt) - mock irradiation - 5 min 944 induced 0.414 0.120025672 0.049690628 DES460 (wt) - mock irradiation - 30 min 945 induced 0.34 0.101325616 0.034450709 DES460 (wt) - mock irradiation - 90 min 947 induced 0.34 0.100680545 0.034231385 mec1_plus_gamma_5_min 948 induced -0.233 0.129789022 -0.030240842 mec1_plus_gamma_10_min 949 induced 0.256 0.125162435 0.032041583 mec1_plus_gamma_20_min 950 repressed -0.065 0.11146938 0.00724551 mec1_plus_gamma_30_min 951 repressed -0.254 0.161061893 0.040909721 mec1_plus_gamma_45_min 952 repressed -0.673 0.184580844 0.124222908 mec1_plus_gamma_60_min 953 repressed -0.181 0.17012276 0.030792219 mec1_plus_gamma_90_min 954 repressed -0.205 0.128378921 0.026317679 DES459 (mec1) - mock irradiation - 5 min 956 induced 0.402 0.116263069 0.046737754 DES459 (mec1) + heat 20 min 961 induced 0.549 0.102022498 0.056010351 MHY1 (dun1) + heat 20 min 962 induced 0.253 0.098912435 0.025024846 DES459 (mec1) - log phase (IR time = 0 sample) 964 repressed 0.004 0.116436706 -0.000465747 DES460 + 0.02% MMS - 5 min 966 induced 0 0.103402259 0 100 microM CuSO4 30 min (B) 970 induced 0.346 0.113144137 0.039147872 wt-gal 973 induced 0 0.097598954 0 wt+gal 974 repressed -0.14 0.10398665 0.014558131 gal1+gal 975 bimodal -0.149 0.113790609 -0.016954801 gal3+gal 977 bimodal 0.415 0.128723394 0.053420209 gal4+gal 978 induced -0.957 0.122331964 -0.11707169 gal5+gal 979 induced -0.08 0.112697442 -0.009015795 gal6+gal 980 induced -1.239 0.097866878 -0.121257062 gal7+gal 981 induced 0.561 0.146517924 0.082196555 gal10+gal 982 induced -0.023 0.143066654 -0.003290533 gal2-gal 985 induced 0 0.126624813 0 gal3-gal 986 induced 0.12 0.16095127 0.019314152 gal4-gal 987 induced -0.824 0.155748226 -0.128336538 gal5-gal 988 induced 0.874 0.095569922 0.083528111 gal6-gal 989 bimodal 1.226 0.108997853 0.133631368 gal7-gal 990 bimodal 0.04 0.111860997 0.00447444 gal10-gal 991 induced -0.143 0.159112211 -0.022753046 gal80-gal 992 repressed 0.262 0.099847834 -0.026160133 gal1gal10+gal 993 bimodal 0.382 0.111455844 0.042576132 gal2gal80-gal 994 repressed 1.109 0.13290422 -0.147390779 gal4gal80-gal 995 repressed 1 0.122671303 -0.122671303 BY4741 GAL t=30min vs. t=0 (YT00261) 996 repressed 0.03 0.116990758 -0.003509723 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced -0.17 0.146973954 -0.024985572 BY4741 GAL t=90min vs. t=0 (YT00262) 998 repressed 0.13 0.124332991 -0.016163289 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed 0 0.106562733 0 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced -0.08 0.166931479 -0.013354518 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed 0.2 0.160386482 -0.032077296 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0.19 0.177086912 -0.033646513 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0.31 0.176348021 -0.054667886 YAL038W 1010 induced 0.29794 0.12838919 0.038252275 YBL020W 1013 induced 0.0025742 0.146376494 0.000376802 YBL040C 1014 induced -0.02905 0.106271471 -0.003087186 YBL084C 1015 induced 0.2963 0.155859783 0.046181254 YBR002C 1016 induced 0.21493 0.129346994 0.027800549 YBR088C 1018 induced 0.018299 0.114887043 0.002102318 YBR142W 1019 induced 0.019031 0.103440067 0.001968568 YBR196C 1024 induced 0.13389 0.132885082 0.017791984 YCR013C 1028 induced 0.05538 0.108033047 0.00598287 YCR042C 1029 induced 0.012463 0.106989824 0.001333414 YDL047W 1032 induced 0.084658 0.122359503 0.010358711 YDL055C 1033 induced 0.16557 0.116502521 0.019289322 YDL132W 1037 induced 0.31093 0.124869305 0.038825613 YDR047W 1039 induced 0.0086231 0.153713592 0.001325488 YDR062W 1040 induced 0.12302 0.099753547 0.012271681 YDR141C 1042 induced 0.21888 0.163308906 0.035745053 YDR373W 1045 induced 0.031775 0.12029733 0.003822448 YDR489W 1047 induced 0.046919 0.161403566 0.007572894 YER023W 1049 induced -0.085095 0.113200616 -0.009632806 YER172C 1050 induced -0.0066211 0.130488237 -0.000863976 YFL005W 1051 induced 0.41754 0.113630041 0.047445087 YFL024C 1052 induced -0.15384 0.128199216 -0.019722167 YGL116W 1055 induced 0.081138 0.119469754 0.009693537 YGR048W 1057 induced 0.52032 0.119864638 0.062367968 YGR172C 1061 induced 0.08775 0.109729742 0.009628785 YGR175C 1062 induced -0.20945 0.122009429 -0.025554875 YGR280C 1064 induced 0.12519 0.102093447 0.012781079 YHR023W 1065 induced -0.040655 0.106563667 -0.004332346 YHR090C 1068 induced 0.090631 0.116276139 0.010538223 YHR118C 1069 induced 0.4712 0.109917849 0.051793291 YHR188C 1070 induced -0.046507 0.126263536 -0.005872138 YIL106W 1073 induced 0.22924 0.103284634 0.02367697 YIR022W 1076 induced 0.15566 0.122263816 0.019031586 YJL081C 1082 induced -0.15162 0.130236184 -0.01974641 YJL091C 1083 induced -0.35083 0.13279733 -0.046589287 YJL194W 1084 induced 0.2969 0.16120099 0.047860574 YJR076C 1087 induced 0.026528 0.117437453 0.003115381 YKL018W 1088 induced -0.13967 0.103792476 -0.014496695 YKL052C 1089 induced 0.35326 0.119071602 0.042063234 YKL125W 1091 repressed 0.1292 0.11371686 -0.014692218 YKR079C 1094 induced -0.046405 0.161894137 -0.007512697 YKR086W 1095 induced -0.079694 0.145476102 -0.011593572 YLL003W 1096 induced 0.18861 0.126724235 0.023901458 YLL035W 1098 repressed 0.058516 0.100071882 -0.005855806 YLR060W 1100 repressed 0.18459 0.129264843 -0.023860997 YLR076C 1101 induced 0.0098454 0.169094473 0.001664803 YLR086W 1102 induced 0.1086 0.154494959 0.016778153 YLR101C 1103 induced -0.047783 0.156522591 -0.007479119 YLR163C 1105 induced -0.051132 0.141396565 -0.007229889 YLR291C 1109 induced -0.026948 0.113268297 -0.003052354 YLR359W 1112 induced 0.27688 0.134384802 0.037208464 YLR378C 1113 induced 0.5868 0.167426251 0.098245724 YLR440C 1115 induced 0.29911 0.144517364 0.043226589 YLR457C 1116 induced 0.0020789 0.140462565 0.000292008 YLR459W 1117 induced -0.04093 0.173918503 -0.007118484 YML031W 1118 induced 0.19615 0.128367252 0.025179236 YML046W 1119 bimodal 0.030708 0.105472367 0.003238845 YML130C 1120 induced 0.59807 0.123369119 0.073783369 YMR001C 1121 induced -0.087568 0.102877147 -0.009008746 YMR043W 1122 induced -0.020903 0.123947442 -0.002590873 YMR076C 1123 induced 0.11439 0.122965366 0.014066008 YMR079W 1124 induced 0.41919 0.152581217 0.06396052 YMR200W 1126 induced 0.21757 0.119197629 0.025933828 YMR239C 1128 induced 0.0011658 0.131536594 0.000153345 YNL150W 1132 induced -0.031716 0.10987584 -0.003484822 YNL158W 1133 induced -0.24332 0.154178025 -0.037514597 YNL272C 1136 induced 0.1913 0.13811053 0.026420544 YNL310C 1137 induced -0.1098 0.106873133 -0.01173467 YNR035C 1138 induced -0.051408 0.139787155 -0.007186178 YNR043W 1139 induced 0.14762 0.1218764 0.017991394 YOR145C 1151 repressed 0.14715 0.114260176 -0.016813385 YOR169C 1154 induced 0.047396 0.104186426 0.00493802 YOR204W 1155 induced 0.12841 0.12934466 0.016609148 YOR232W 1157 induced 0.096094 0.135552651 0.013025796 YOR236W 1158 induced 0.046638 0.121236931 0.005654248 YOR259C 1159 induced 0.15963 0.098566094 0.015734106 YOR261C 1160 induced 0.36759 0.132655433 0.048762811 YOR281C 1162 induced -0.007718 0.113681385 -0.000877393 YOR335C 1164 induced 0.14601 0.138370986 0.020203548 YPL010W 1166 induced 0.33825 0.16559606 0.056012867 YPL063W 1167 induced 0.042641 0.132693241 0.005658172 YPL076W 1168 induced -0.1571 0.134005321 -0.021052236 YPL126W 1170 repressed 0.11009 0.100384149 -0.011051291 YPL231W 1173 induced 0.11404 0.113360717 0.012927656 YPL243W 1174 induced 0.090728 0.149276979 0.013543602 YPR144C 1177 repressed -0.045099 0.105976475 0.004779433 YPR169W 1178 induced 0.019615 0.136943148 0.00268614 YPR178W 1179 induced -0.16607 0.134530433 -0.022341469 YPR180W 1180 induced 0.14145 0.110321135 0.015604925 YBR029C 1182 induced 0.075058 0.14329537 0.010755464 YDR054C 1183 induced 0.32622 0.112481329 0.036693659 YER006W 1188 induced 0.059995 0.097004294 0.005819773 YFR037C 1190 induced 0.27029 0.138334578 0.037390453 YGL073W 1191 induced -0.080025 0.109523898 -0.00876465 YGL122C 1192 induced 0.36029 0.142987771 0.051517064 YGR090W 1194 repressed -0.034018 0.103828883 0.003532051 YGR198W 1196 induced 0.0016012 0.153799944 0.000246264 YHR085W 1199 repressed 0.18769 0.100553585 -0.018872902 YHR205W 1201 induced -0.1359 0.118381255 -0.016088013 YJL097W 1202 induced 0.2852 0.142876214 0.040748296 YKL033W 1204 induced 0.074917 0.125123226 0.009373857 YLR008C 1208 induced -0.088352 0.105246919 -0.009298776 YLR229C 1211 induced 0.067749 0.132302558 0.008963366 YMR235C 1212 induced 0.76683 0.114446415 0.087760945 YNL149C 1213 induced 0.15311 0.129188294 0.01978002 YNL222W 1214 induced 0.17891 0.118736464 0.021243141 YNL245C 1215 induced -0.21027 0.125027072 -0.026289443 YNL258C 1216 induced 0.025043 0.164683532 0.00412417 YNL313C 1217 induced -0.16392 0.102977035 -0.016879996 YOR077W 1220 induced 0.047676 0.113602969 0.005416135 YPL075W 1221 bimodal 0.22421 0.098495146 0.022083597 ABF1OE 1223 induced -0.040144 0.098876494 -0.003969298 ADR1OE+ 1224 induced -0.126059 0.108027446 -0.013617832 BYE1OE+ 1225 induced 0.0177515 0.140970874 0.002502444 CAT8OE+ 1226 repressed 0.01013 0.12110997 -0.001226844 CRZ1OE+ 1227 induced -0.060162 0.100976942 -0.006074975 CST6OE+ 1228 induced -0.0258645 0.108472274 -0.002805581 CUP2OE+ 1229 repressed 0.688618 0.14435773 -0.099407331 ECM22OE+ 1230 induced 0.072691 0.102385176 0.007442481 GAT4OE+ 1232 induced 0.317011 0.171674291 0.054422639 GIS1OE+ 1234 induced 0.120725 0.133889096 0.016163761 HAC1OE+ 1237 repressed 0.302422 0.200648338 -0.060680472 HAP4OE+ 1238 repressed 0.3355555 0.165391617 -0.055498067 HMS1OE+ 1239 induced 0.074435 0.109924851 0.008182256 HSF1OE+ 1240 repressed 0.2594475 0.107196135 -0.027811769 INO2OE+ 1241 repressed 0.4403085 0.103960978 -0.045774902 MBP1OE+ 1242 repressed -0.1692685 0.116784914 0.019768007 MET4OE+ 1244 repressed 1.0841285 0.141459111 -0.153359854 MGA1OE+ 1245 induced 0.1602825 0.114663928 0.018378621 MIG1OE+ 1246 induced 0.1999785 0.109021658 0.021801988 MOT3OE+ 1247 induced -0.015511 0.122598954 -0.001901632 PUT3OE+ 1251 repressed 0.0939995 0.096872666 -0.009105982 RAP1OE+ 1252 induced 0.0794075 0.11001727 0.008736196 RFX1OE+ 1253 induced 0.042163 0.12668596 0.00534146 ROX1OE+ 1256 bimodal 0.2273135 0.153037715 0.034787539 SFP1OE+ 1258 repressed -0.1437305 0.124536501 0.017899694 SKN7OE+ 1260 induced -0.045306 0.178981516 -0.008108937 SOK2OE+ 1261 bimodal -0.4513275 0.124051998 -0.055988078 SPS18OE+ 1262 induced 0.007962 0.122978902 0.000979158 STP2OE+ 1265 induced -0.1618555 0.114747946 -0.018572586 SUT1OE+ 1267 repressed -0.1474685 0.113655246 0.016760569 SWI4OE+ 1268 induced -0.005411 0.189031927 -0.001022852 TOS8OE+ 1269 induced -0.187351 0.121540795 -0.02277079 UPC2OE+ 1270 induced 0.0374895 0.136620146 0.005121821 XBP1OE+ 1271 bimodal 0.3415065 0.116073096 0.039639717 YAP1OE+ 1272 repressed 0.1738395 0.097346901 -0.016922737 YHP1OE+ 1273 induced 0.1364435 0.129114544 0.01761684 YOX1OE+ 1274 bimodal 0.155102 0.151933346 0.023565166 YPR015COE+ 1275 induced 0.0383255 0.134012323 0.005136089 ZAP1OE+ 1277 induced -0.042308 0.099034727 -0.004189961 WT/cst6+ 1282 induced 0.0620645 0.111615945 0.006927388 WT/gzf3+ 1290 repressed -0.006143 0.109656927 0.000673623 WT/sok2+ 1312 induced -0.0373895 0.121929145 -0.00455887 WT/upc2+ 1321 induced 0.0698085 0.111065627 0.007753325 WT/zap1+ 1328 repressed 0.063943 0.096473581 -0.00616881