Stp2-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 repressed -0.67 0.135010268857356 0.0904568801344285 0.0230179838426775 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced -0.23 0.0981021284540702 -0.0225634895444361 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.03 0.132904219566841 -0.00398712658700523 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed 0.09 0.0991318147871546 -0.00892186333084391 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed 0.84 0.100586258401792 -0.0844924570575053 7. Expression during the cell Cycle (cdc28)(1) 48 induced -0.59 0.10370285660941 -0.0611846853995519 7. Expression during the cell Cycle (cdc28)(4) 51 induced 0.05 0.112257281553398 0.0056128640776699 7. Expression during the cell Cycle (cdc28)(5) 52 induced 0.11 0.115935399551904 0.0127528939507094 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.49 0.111464712471994 -0.0546177091112771 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced -0.44 0.120714619118745 -0.0531144324122478 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed 0.02 0.133468073188947 -0.00266936146377894 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed 0.07 0.109002053771471 -0.00763014376400297 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed -0.17 0.10285287528006 0.0174849887976102 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -0.02 0.110997479462285 -0.0022199495892457 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced -0.26 0.100276325616131 -0.0260718446601941 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced -0.333 0.169838032113518 -0.0565560646938015 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -0.287 0.0996396564600448 0.0285965814040329 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.377 0.0988662247946229 -0.0372725667475728 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.269 0.139182692307692 -0.0374401442307692 12. Expression in tup1-deleted cells(1) 96 induced 0 0.14882001493652 0 18. parental strain versus evolved strain 3(1) 102 bimodal 0 0.174139749813294 0 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.130798637042569 0 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.120865851381628 0 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.10440860716953 0 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.106997292755788 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.139204163554892 0 32. Young: Expression in swi2 mutant(1) 116 bimodal 0.756 0.148146471247199 0.111998732262882 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.137469193427931 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(2) 123 induced 0 0.111696695294996 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(3) 124 induced 0 0.168300504107543 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced 0.287 0.156872666168783 0.0450224551904407 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(6) 127 induced 0 0.139832897684839 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(7) 128 induced 0 0.12115711351755 0 42. Young: Expression in rap1 deletion mutant(1) 132 induced 1.176 0.0973940440627334 0.114535395817774 45. Expression in snf2 mutant cells in minimal medium(1) 135 bimodal -0.066 0.108492345033607 -0.00716049477221806 46. Expression in swi1 mutant cells in YPD(1) 136 induced 0.036 0.112941094100075 0.0040658793876027 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed -0.038 0.111165515309933 0.00422428958177745 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(2) 147 repressed 0.144 0.106114171023152 -0.0152804406273339 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 repressed 0.187 0.101347087378641 -0.0189519053398059 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 induced 0.267 0.117447722180732 0.0313585418222554 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 repressed 0.115 0.101634615384615 -0.0116879807692307 54. Expression in response to overproduction of Ste5p(1) 159 repressed 0.147 0.112894417475728 -0.016595479368932 55. Expression in response to overproduction of Ste11p(1) 160 repressed 0.338 0.11385502240478 -0.0384829975728156 56. Expression in response to overproduction of Ste12p(1) 161 repressed 0.091 0.140761295743092 -0.0128092779126214 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.04 0.115380414488424 0.00461521657953696 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed 0.047 0.100478902165795 -0.00472250840179237 62. Expression in response to osmotic shock in hog1 deletion mutant cells(1) 167 bimodal 0.177 0.10827996639283 0.0191655540515309 66. Expression in ste5 deletion mutant cells(1) 171 induced 0.036 0.128262229275579 0.00461744025392084 67. Expression in ste7 deletion mutant cells(1) 172 repressed -0.028 0.102504200896191 0.00287011762509335 68. Expression in ste11 deletion mutant cells(1) 173 induced -0.024 0.13669716206124 -0.00328073188946976 69. Expression in ste12 deletion mutant cells(1) 174 repressed -0.038 0.113804611650485 0.00432457524271843 70. Expression in ste18 deletion mutant cells(1) 175 repressed -0.041 0.111044156086632 0.00455281039955191 71. Expression in bni1 deletion mutant cells(1) 176 induced 0.079 0.122256348020911 0.00965825149365197 72. Expression in response to overproduction of activated Bni1p(1) 177 induced 0.101 0.113183345780433 0.0114315179238237 73. Expression in response to overproduction of activated Pkc1p(1) 178 bimodal 0.661 0.114214899178491 0.0754960483569826 74. Expression in response to overproduction of activated Rho1p(1) 179 induced 0.441 0.118015776699029 0.0520449575242718 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed 0.014 0.112666635548917 -0.00157733289768484 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(2) 182 repressed 0.008 0.105294529499627 -0.000842356235997016 77. Expression in tec1 deletion mutant cells(1) 183 induced -0.013 0.118951643017177 -0.0015463713592233 78. Expression in kss1 deletion mutant cells(1) 184 induced -0.005 0.101542662434653 -0.000507713312173265 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.003 0.138268764002987 0.000414806292008961 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed 0.051 0.118415795369679 -0.00603920556385363 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed 0.078 0.163540421956684 -0.0127561529126214 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed 0.015 0.130752893950709 -0.00196129340926063 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced 0.066 0.107413181478715 0.00708926997759519 92. Expression in cna1 cna2 double mutant cells(1) 198 repressed 0.001 0.148533887229276 -0.000148533887229276 94. Expression in response to 1ug/mL FK506(1) 200 repressed 0.151 0.137442587752054 -0.0207538307505602 95. Expression in response to 50ug/mL FK506(1) 201 induced 0.516 0.100356609410007 0.0517840104555636 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 repressed 0 0.103930638536221 0 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced 0 0.101432038834951 0 101. Young: Expression in spt3 deletion mutant(1) 207 repressed 0 0.108110997012696 0 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.102035567587752 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0.7 0.126468913368185 0.0885282393577295 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0.12 0.123823282300224 0.0148587938760269 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(4) 216 induced 0.23 0.118551624346527 0.0272668735997012 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0.28 0.122416915608663 0.0342767363704256 110. Rosetta 2000: Expression in ade2 (haploid) deletion mutant (1) 229 induced 0.123 0.0965025205377147 0.0118698100261389 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced 0.332 0.0958882561613144 0.0318349010455564 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.183 0.156558999253174 0.0286502968633308 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.286 0.129820294996266 0.0371286043689321 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced 0.528 0.125472367438387 0.0662494100074683 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced 0.233 0.131882001493652 0.0307285063480209 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.289 0.113430265123226 0.0327813466206123 129. Rosetta 2000: Expression in bul1 deletion mutant (1) 248 bimodal -0.096 0.114088872292756 -0.0109525317401046 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 bimodal 0.236 0.116286874533234 0.0274437023898432 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 repressed -0.103 0.11275858849888 0.0116141346153846 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal -0.173 0.118313106796117 -0.0204681674757282 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced 0.229 0.106643483943241 0.0244213578230022 137. Rosetta 2000: Expression in clb2 deletion mutant (1) 256 induced 0.249 0.099616784914115 0.0248045794436146 141. Rosetta 2000: Expression in cnb1 deletion mutant (1) 260 induced 0.027 0.115127427184466 0.00310844053398058 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced 0.379 0.128421863330844 0.0486718862023899 144. Rosetta 2000: Expression in cyc2 deletion mutant (1) 263 induced -0.01 0.11633355115758 -0.0011633355115758 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed -0.266 0.109092606422704 0.0290186333084393 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed 0.296 0.0982328230022405 -0.0290769156086632 150. Rosetta 2000: Expression in dig2 deletion mutant (1) 269 induced -0.046 0.10428211351755 -0.0047969772218073 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.385 0.111811986557132 0.0430476148244958 153. Rosetta 2000: Expression in ecm1 (**3) deletion mutant (1) 272 induced 0.063 0.125819641523525 0.00792663741598208 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced 0.09 0.103951176250934 0.00935560586258406 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 repressed -0.063 0.105748693054518 0.00666216766243463 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.023 0.104513629574309 0.00240381348020911 160. Rosetta 2000: Expression in erd1 deletion mutant (1) 279 induced 0.306 0.128681852128454 0.0393766467513069 161. Rosetta 2000: Expression in erg2 deletion mutant (1) 280 induced 1.01 0.103216486183719 0.104248651045556 163. Rosetta 2000: Expression in erg4 (haploid **7) deletion mutant (1) 282 induced -0.053 0.104875373412995 -0.00555839479088873 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.761 0.127010828976848 0.0966552408513813 171. Rosetta 2000: Expression in fre6 deletion mutant (1) 290 repressed -0.007 0.111227595220314 0.000778593166542198 172. Rosetta 2000: Expression in fus2 deletion mutant (1) 291 induced 0.03 0.101898338312173 0.00305695014936519 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced 0.99 0.105512509335325 0.104457384241972 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced 0.219 0.125042008961912 0.0273841999626587 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 bimodal -0.057 0.117377707244212 -0.00669052931292008 181. Rosetta 2000: Expression in gyp1 deletion mutant (1) 300 induced 0.246 0.0967106982823002 0.0237908317774458 182. Rosetta 2000: Expression in hat2 deletion mutant (1) 301 induced -0.02 0.113526885735624 -0.00227053771471248 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 0.332 0.131087565347274 0.043521071695295 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced 0.163 0.14035427557879 0.0228777469193428 187. Rosetta 2000: Expression in his1 deletion mutant (1) 306 induced 0.053 0.103363984316654 0.00547829116878266 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced -0.116 0.141829723674384 -0.0164522479462285 189. Rosetta 2000: Expression in hog1 (haploid) deletion mutant (1) 308 induced -0.06 0.102358103061987 -0.00614148618371922 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced 0.01 0.101383495145631 0.00101383495145631 193. Rosetta 2000: Expression in imp2 deletion mutant (1) 312 induced 0.336 0.116900672143391 0.0392786258401794 194. Rosetta 2000: Expression in imp2 (**12) deletion mutant (1) 313 induced 0.206 0.118422330097087 0.0243949999999999 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced -0.05 0.101591206123973 -0.00507956030619865 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 bimodal 0 0.119790888722928 0 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 induced 0.08 0.104534167289022 0.00836273338312176 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced 0.306 0.130394417475728 0.0399006917475728 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced 0.196 0.114697068707991 0.0224806254667662 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 induced 0.116 0.100642737117252 0.0116745575056012 210. Rosetta 2000: Expression in mrt4 deletion mutant (1) 329 repressed 0.495 0.0985945668409261 -0.0488043105862584 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 bimodal 0.013 0.114084204630321 0.00148309466019417 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 bimodal 0.09 0.148516150112024 0.0133664535100822 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced 0.063 0.099542569081404 0.00627118185212845 224. Rosetta 2000: Expression in pex12 deletion mutant (1) 343 induced 0.013 0.10301717699776 0.00133922330097088 225. Rosetta 2000: Expression in pfd2 (**14) deletion mutant (1) 344 repressed -0.209 0.130762229275579 0.027329305918596 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 bimodal 0.86 0.144720873786408 0.124459951456311 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 induced 0.199 0.099468353248693 0.0197942022964899 232. Rosetta 2000: Expression in rad6 (haploid) deletion mutant (1) 351 induced 0.435 0.112037434652726 0.0487362840739358 233. Rosetta 2000: Expression in ras1 deletion mutant (1) 352 repressed 0.083 0.102304891710232 -0.00849130601194926 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal 0.455 0.115262789395071 0.0524445691747573 239. Rosetta 2000: Expression in rnh1 deletion mutant (1) 358 induced -0.043 0.0997288088125467 -0.00428833877893951 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.306 0.136954350261389 0.041908031179985 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced 0.08 0.138052651232263 0.011044212098581 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed -0.166 0.109313853622106 0.0181460997012696 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed 0.043 0.140391616878267 -0.00603683952576548 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.027 0.112645631067961 -0.00304143203883495 249. Rosetta 2000: Expression in rps24a (haploid) deletion mutant (1) 368 repressed -0.199 0.10380787901419 0.0206577679238238 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.229 0.10954070201643 -0.0250848207617625 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 bimodal -0.036 0.115288928304705 -0.00415040141896938 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.113 0.114278379387603 0.0129134568707991 256. Rosetta 2000: Expression in sap18 deletion mutant (1) 375 induced 0.096 0.099489357729649 0.0095509783420463 257. Rosetta 2000: Expression in sap30 deletion mutant (1) 376 induced 0.183 0.0977861277072442 0.0178948613704257 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced 0.12 0.149538368185213 0.0179446041822256 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.046 0.112289021657954 0.00516529499626588 261. Rosetta 2000: Expression in sgs1 deletion mutant (1) 380 induced 0.233 0.0986533793876027 0.0229862373973114 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced 0.807 0.105856982823002 0.0854265851381626 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced 0.083 0.122791728902166 0.0101917134988798 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced 0.379 0.127231142643764 0.0482206030619866 267. Rosetta 2000: Expression in sir3 deletion mutant (1) 386 induced 0.236 0.115176904406273 0.0271817494398804 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced 0.223 0.142189600448096 0.0317082808999254 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0.02 0.136727501867065 0.0027345500373413 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.133 0.115380414488424 0.0153455951269604 273. Rosetta 2000: Expression in stb4 deletion mutant (1) 392 induced 0.027 0.122650298730396 0.00331155806572069 274. Rosetta 2000: Expression in ste11 (haploid) deletion mutant (1) 393 induced -0.08 0.13669716206124 -0.0109357729648992 275. Rosetta 2000: Expression in ste12 (haploid) deletion mutant (1) 394 repressed -0.126 0.113804611650485 0.0143393810679611 276. Rosetta 2000: Expression in ste18 (haploid) deletion mutant (1) 395 repressed -0.027 0.12326502987304 0.00332815580657208 277. Rosetta 2000: Expression in ste2 (haploid) deletion mutant (1) 396 induced -0.043 0.119448749066468 -0.00513629620985812 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 induced 0.1 0.109573842419716 0.0109573842419716 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced 0.12 0.128262229275579 0.0153914675130695 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced 0.468 0.13089572442121 0.0612591990291263 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.057 0.156317681105302 0.00891010782300221 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced -0.01 0.116093633308439 -0.00116093633308439 287. Rosetta 2000: Expression in tom6 deletion mutant (1) 406 repressed -0.046 0.100201643017177 0.00460927557879014 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 induced -0.036 0.129603248693055 -0.00466571695294998 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced -0.289 0.213170276325616 -0.061606209858103 291. Rosetta 2000: Expression in ubp8 deletion mutant (1) 410 induced -0.233 0.0994137415982076 -0.0231634017923824 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.458 0.137999439880508 0.0632037434652727 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.465 0.13082570948469 0.0608339549103809 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 repressed -0.13 0.112460324869305 0.0146198422330097 302. Rosetta 2000: Expression in yap1 deletion mutant (1) 421 induced -0.013 0.101876867064974 -0.00132439927184466 304. Rosetta 2000: Expression in yap7 deletion mutant (1) 423 induced 0.06 0.102599887976102 0.00615599327856612 309. Rosetta 2000: Expression in yel008w deletion mutant (1) 428 repressed -0.146 0.114738610903659 0.0167518371919342 310. Rosetta 2000: Expression in yel010w deletion mutant (1) 429 bimodal 0.06 0.111402632561613 0.00668415795369678 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed 0.043 0.117372572815534 -0.00504702063106796 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced 0.096 0.111831590739358 0.0107358327109784 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.95 0.116514189693801 0.110688480209111 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced 0.402 0.105146564600448 0.0422689189693801 328. Rosetta 2000: Expression in yer071c deletion mutant (1) 447 induced -0.013 0.100701082897685 -0.0013091140776699 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 induced 0.917 0.124976661687827 0.114603598767737 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced 0.229 0.110578323375653 0.0253224360530245 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.767 0.106361557132188 0.0815793143203882 336. Rosetta 2000: Expression in yhl045w deletion mutant (1) 455 induced 0.053 0.118233756534727 0.00626638909634053 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.023 0.128895164301718 -0.00296458877893951 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 bimodal -0.003 0.109247106049291 -0.000327741318147873 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced -0.063 0.112802931292009 -0.00710658467139657 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed -0.093 0.113588032113518 0.0105636869865572 349. Rosetta 2000: Expression in yml033w deletion mutant (1) 468 induced 0.096 0.104816094100075 0.0100623450336072 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.053 0.101238330843913 -0.00536563153472739 377. Rosetta 2000: Expression in yor015w deletion mutant (1) 496 repressed -0.13 0.101683159073936 0.0132188106796117 378. Rosetta 2000: Expression in yor021c deletion mutant (1) 497 induced 0 0.103745332337565 0 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed -0.306 0.132588685586258 0.0405721377893949 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed -0.05 0.107003827483196 0.0053501913741598 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced 0.365 0.151571135175504 0.055323464339059 384. Rosetta 2000: Expression in zds1 deletion mutant (1) 503 induced 0.196 0.0955531179985064 0.0187284111277073 385. Rosetta 2000: Expression in cells with AUR1 under tet promoter(1) 504 induced -0.741 0.102939227035101 -0.0762779672330098 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.382 0.143835884988798 0.0549453080657208 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 induced 1.389 0.186608943241225 0.259199822162062 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.538 0.116128640776699 0.0624772087378641 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.16 0.160290328603435 0.0256464525765496 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced 0.266 0.134058065720687 0.0356594454817027 392. Rosetta 2000: Expression in cells with PMA1 under tet promoter(1) 511 induced 0.551 0.0982430918595967 0.0541319436146378 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced -0.01 0.110495238984317 -0.00110495238984317 395. Rosetta 2000: Expression in response to 2-deoxy-D-glucose(1) 514 induced 0.694 0.105956870799104 0.0735340683345782 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed -0.259 0.121221060492905 0.0313962546676624 399. Rosetta 2000: Expression in response to FR901,228(1) 518 bimodal 0.01 0.101322815533981 0.00101322815533981 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced 0.256 0.108619772218073 0.0278066616878267 401. Rosetta 2000: Expression in response to HU(1) 520 induced 0.123 0.158053117998506 0.0194405335138162 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 1.1 0.125091486183719 0.137600634802091 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.425 0.122444921583271 0.0520390916728902 404. Rosetta 2000: Expression in response to MMS(1) 523 induced -1.309 0.0995869118745332 -0.130359267643764 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.279 0.164234503360717 0.04582142643764 407. Rosetta 2000: Expression in response to Tunicamycin(1) 526 induced 0.993 0.10959858103062 0.108831390963406 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced -0.02 0.15178211351755 -0.003035642270351 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 induced -0.24 0.125538181478715 -0.0301291635548916 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(8) 534 repressed -0.27 0.101130041075429 0.0273051110903658 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 repressed 0.23 0.104886109036594 -0.0241238050784166 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 induced 0.19 0.145112023898432 0.0275712845407021 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed 0.42 0.100318334578043 -0.0421337005227781 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(1) 557 induced 0.869 0.0952945294996266 0.0828109461351755 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(2) 558 induced 0.049 0.1289143017177 0.0063168007841673 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(3) 559 induced 1.087 0.103287901418969 0.112273948842419 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(4) 560 induced 0.873 0.117287621359223 0.102392093446602 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(1) 571 induced 0.602 0.14273571695295 0.0859269016056759 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(2) 572 induced 0.075 0.110315067214339 0.00827363004107542 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(3) 573 induced -0.469 0.108816747572816 -0.0510350546116507 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(4) 574 induced -0.183 0.108691654219567 -0.0198905727221808 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(5) 575 induced 0.298 0.10663788274832 0.0317780890589994 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(6) 576 induced 0.48 0.12851288274832 0.0616861837191936 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced -0.494 0.0990898058252427 -0.0489503640776699 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.151 0.118130601194922 0.0178377207804332 pho85 vs WT(1) 582 induced -0.358 0.11964712471994 -0.0428336706497385 PHO81c vs WT exp1(1) 583 induced 0.824 0.112448655713219 0.0926576923076925 PHO81c vs WT exp2(1) 584 induced -1.12 0.141868932038835 -0.158893203883495 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced 0.214 0.135153099327857 0.0289227632561614 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced 0.856 0.143630041075429 0.122947315160567 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 1.314 0.122162528005975 0.160521561799851 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced 0.343 0.143286034353996 0.0491471097834206 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced 0.172 0.141119772218073 0.0242726008215086 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced 0.137 0.109986930545183 0.0150682094846901 436. Expression in wild type versus strain MS221 under steady state conditions in YPD(1) 593 repressed 0.337 0.108929238237491 -0.0367091532860345 437. Expression in wild type versus strain PH2 (ure2 deletion) under steady state conditions in YPD(1) 594 induced 0.86 0.118345313666916 0.101776969753548 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced 1.064 0.144145351008215 0.153370653472741 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0.112 0.151325616131441 0.0169484690067214 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 0.581 0.131565533980583 0.0764395752427187 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced 0.652 0.134141616878267 0.0874603342046301 450. Expression in response to low MNNG (8 microgram/ml) for 60 min(1) 607 induced 0.202 0.108263629574309 0.0218692531740104 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced 0.454 0.136771844660194 0.0620944174757281 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 induced 0.322 0.102473861090366 0.0329965832710979 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed -0.105 0.131813386855863 0.0138404056198656 465. Expression in rpd3 deletion(1) 622 induced 0.268 0.136573935772965 0.0366018147871546 467. Expression in sin3 deletion(1) 624 induced 0.3 0.120326269604182 0.0360978808812546 469. Expression in hda1 deletion(1) 626 induced 0.136 0.165243651979089 0.0224731366691561 470. Expression in hda1 deletion(1) 627 induced 0.108 0.133643110530246 0.0144334559372666 472. Expression in sap3 deletion(1) 629 induced -0.074 0.115627333831217 -0.00855642270351006 473. Expression in ume6 deletion(1) 630 induced -0.115 0.137366504854369 -0.0157971480582524 474. Expression in hda1 deletion(1) 631 induced -0.496 0.102656366691561 -0.0509175578790143 475. Expression in hos2 deletion(1) 632 repressed -0.386 0.0975676811053025 0.0376611249066468 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced -0.204 0.102949029126214 -0.0210016019417477 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced 0 0.13810212845407 0 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced 0 0.097191000746826 0 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced -1.02 0.116635548917102 -0.118968259895444 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced 1.243 0.15022358103062 0.186727911221061 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 induced -1.202 0.117962565347274 -0.141791003547423 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.347 0.143520817774459 -0.193322541542196 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced -1.254 0.127139189693801 -0.159432543876026 481. Expression in response to heat shock: 15,30,45,60,120 min(2) 653 repressed 0.926 0.115430358476475 -0.106888511949216 481. Expression in response to heat shock: 15,30,45,60,120 min(3) 654 repressed 1.739 0.0994594846900672 -0.172960043876027 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 repressed 0.762 0.0993171209858103 -0.0756796461911875 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced 0.803 0.0990473300970874 0.0795350060679612 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0.425 0.118022778192681 0.0501596807318894 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0.715 0.140501773711725 0.100458768203883 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 1.225 0.121301344286781 0.148594146751307 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced -0.054 0.0993642643764003 -0.00536567027632562 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0.003 0.0962303958177745 0.000288691187453323 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced 0.601 0.0976152912621359 0.0586667900485437 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 induced 0.622 0.108975914861837 0.0677830190440626 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced -0.147 0.119207897684839 -0.0175235609596713 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 2.277 0.126390963405527 0.287792223674385 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 induced 2.119 0.130470967139656 0.276467979368931 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced 1.196 0.164592046303211 0.19685208737864 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 2.203 0.150622199402539 0.331820705283793 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 induced 2.342 0.111603342046303 0.261375027072442 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0.25 0.113125 0.02828125 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced 0.28 0.123309839432412 0.0345267550410754 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 0.69 0.126018483943241 0.0869527539208363 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0.95 0.123864357729649 0.117671139843167 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced 0.76 0.140815440627334 0.107019734876774 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced 0 0.123618838685586 0 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.58 0.136964619118745 0.0794394790888721 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.44 0.12351288274832 0.0543456684092608 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.18 0.133633308439134 0.0240539955190441 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.93 0.123998786407767 0.115318871359223 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed -0.11 0.114546303211352 0.0126000933532487 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed 0.53 0.137632094846901 -0.0729450102688575 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 repressed -0.21 0.112170929798357 0.023555895257655 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced -0.63 0.128257561613144 -0.0808022638162807 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced -0.11 0.136696228528753 -0.0150365851381628 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 0.91 0.136472180731889 0.124189684466019 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.37 0.146457244212099 0.0541891803584766 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced -0.44 0.137850541448842 -0.0606542382374905 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced 0.91 0.116488050784167 0.106004126213592 515. Brown enviromental changes :29C to 33C - 30 minutes(1) 713 repressed -0.39 0.109206497386109 0.0425905339805825 516. Brown enviromental changes :33C vs. 30C - 90 minutes(1) 714 induced -0.57 0.0988428864824496 -0.0563404452949963 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 0.16 0.130769230769231 0.020923076923077 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced -0.92 0.126051157580284 -0.115967064973861 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed -0.3 0.105289861837192 0.0315869585511576 520. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 5 minutes(1) 718 induced 0.06 0.0995808439133682 0.00597485063480209 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced -0.18 0.107537341299477 -0.0193567214339059 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced -0.11 0.0981147311426438 -0.0107926204256908 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 0.6 0.104804891710232 0.0628829350261392 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0.25 0.102186799850635 0.0255466999626588 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.04 0.112220873786408 0.00448883495145632 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced 0.14 0.107942961165049 0.0151120145631069 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.29 0.108884428678118 0.0315764843166542 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced 0.09 0.113238424197162 0.0101914581777446 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.27 0.120044342793129 0.0324119725541448 546. Brown enviromental changes :2.5mM DTT 060 min dtt-1(1) 744 induced -0.55 0.109715272591486 -0.0603433999253173 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 induced -0.57 0.116471247199403 -0.0663886109036597 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 repressed -0.61 0.102062640029873 0.0622582104182225 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -0.68 0.126688293502614 0.0861480395817775 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed 0.33 0.106697628827483 -0.0352102175130694 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 induced 0.26 0.108329443614638 0.0281656553398059 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced 0.6 0.136867998506348 0.0821207991038088 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.05 0.124883308439134 -0.0062441654219567 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.04 0.12245145631068 -0.0048980582524272 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced -0.02 0.127410847647498 -0.00254821695294996 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced 0.3 0.145191374159821 0.0435574122479463 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced 0.12 0.140902725914862 0.0169083271097834 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.19 0.135387415982076 -0.0257236090365944 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced 0.14 0.138273431665422 0.0193582804331591 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.07 0.129815160567588 -0.00908706123973116 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.24 0.116079630321135 0.0278591112770724 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced 0.34 0.139678864824496 0.0474908140403286 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced -0.14 0.0968932038834951 -0.0135650485436893 570. Brown enviromental changes :1M sorbitol - 90 min(1) 768 induced -0.01 0.0964049663928305 -0.000964049663928305 572. Brown enviromental changes :Hypo-osmotic shock - 5 min(1) 770 induced 0.52 0.107564880507842 0.0559337378640778 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed -0.17 0.109225634802091 0.0185683579163555 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed -0.41 0.10293642643764 0.0422039348394324 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed -0.72 0.138963312173264 0.10005358476475 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed -1.66 0.116959017923824 0.194151969753548 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced 0.95 0.128104929051531 0.121699682598954 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 1.66 0.106964152352502 0.177560492905153 583. Brown enviromental changes :Nitrogen Depletion 30 min.(1) 781 induced 0.4 0.0999691934279313 0.0399876773711725 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed 0.48 0.100456030619866 -0.0482188946975357 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed 0.5 0.129179424943988 -0.064589712471994 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 induced 1.79 0.154324122479462 0.276240179238237 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 induced 0.85 0.147867345033607 0.125687243278566 589. Brown enviromental changes :Nitrogen Depletion 1 d(1) 787 induced 2.53 0.136548263629574 0.345467106982822 590. Brown enviromental changes :Nitrogen Depletion 2 d(1) 788 induced 1 0.131369025392084 0.131369025392084 591. Brown enviromental changes :Nitrogen Depletion 3 d(1) 789 induced 2.59 0.135515776699029 0.350985861650485 592. Brown enviromental changes :Nitrogen Depletion 5 d(1) 790 induced 1.11 0.128670649738611 0.142824421209858 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.51 0.114843633308439 0.0585702529873039 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 1.47 0.155995145631068 0.22931286407767 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 0.28 0.153176344286781 0.0428893764002987 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 0.85 0.156489451082898 0.133016033420463 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 0.73 0.155010268857356 0.11315749626587 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 1.23 0.129372199402539 0.159127805265123 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 0.56 0.126931945481703 0.0710818894697537 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 0.4 0.152483196415235 0.060993278566094 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced -0.06 0.112823002240478 -0.00676938013442868 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.27 0.104770351008215 -0.0282879947722181 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.28 0.119696601941748 0.0335150485436894 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.37 0.166940814040329 0.0617681011949217 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.94 0.144335324869305 0.135675205377147 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 0.87 0.137672236743839 0.11977484596714 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 0.85 0.147806665421957 0.125635665608663 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 1.53 0.162448188946975 0.248545729088872 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 1.43 0.163996919342793 0.234515594660194 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 1.44 0.145951269604182 0.210169828230022 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 1.22 0.143508215085885 0.17508002240478 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced 0.09 0.105119958924571 0.00946079630321139 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.02 0.12136715832711 0.0024273431665422 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 induced 0.05 0.109930918595967 0.00549654592979835 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced -0.94 0.102152259148618 -0.0960231235997009 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.12 0.110120425690814 0.0132144510828977 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced -0.12 0.132997106049291 -0.0159596527259149 636. Brown enviromental changes :ethanol car-1(1) 827 induced -0.06 0.158340179238237 -0.00950041075429422 638. Brown enviromental changes :glucose car-1(1) 829 repressed 0.45 0.108928304705004 -0.0490177371172518 639. Brown enviromental changes :mannose car-1(1) 830 repressed -0.2 0.121377893950709 0.0242755787901418 640. Brown enviromental changes :raffinose car-1(1) 831 repressed -0.84 0.0968577296489918 0.0813604929051531 641. Brown enviromental changes :sucrose car-1(1) 832 repressed -0.73 0.111752240477969 0.0815791355489174 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.27 0.156643483943241 0.0422937406646751 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -0.35 0.123984783420463 0.043394674197162 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed -0.89 0.113367251680358 0.100896853995519 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed -0.3 0.122373039581777 0.0367119118745331 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced 0.44 0.145382281553398 0.0639682038834951 657. Brown enviromental changes :steady state 25 dec C ct-2(1) 848 repressed 0.11 0.106465646004481 -0.0117112210604929 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced -0.01 0.0987612023898432 -0.000987612023898432 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced -0.97 0.117647964899178 -0.114118525952203 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.731 0.154929518297237 0.11325347787528 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 repressed 0.029 0.135902725914862 -0.003941179051531 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 repressed -0.903 0.160199775952203 0.144660397684839 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed -0.723 0.159901512322629 0.115608793409261 trp- 2% Glucose-Average fus3 (+Fus3T180A,Y182F) 5mM aF, 30 min. 905 induced -0.18 0.100273525018671 -0.0180492345033608 Addition of 1M NaCl (90) 917 induced 0.98 0.149272311426438 0.146286865197909 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -1.486 0.131112770724421 -0.19483357729649 DES460 + 0.02% MMS - 15 min 920 induced -0.15 0.107898151605676 -0.0161847227408514 DES459 (mec1-) + 0.02% MMS - 5 min 926 repressed 0.09 0.107116784914115 -0.00964051064227035 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed 0.07 0.110970873786408 -0.00776796116504856 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.01 0.140723020911128 0.00140723020911128 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed 0.353 0.1165571321882 -0.0411446676624346 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.14 0.122941560866318 0.0172118185212845 dun1- + 0.02% MMS - 90 min 934 repressed -0.14 0.126293409260642 0.0176810772964899 dun1- + 0.02% MMS - 120 min 935 repressed -0.15 0.105688013442868 0.0158532020164302 wt_plus_gamma_5_min 936 induced -0.66 0.123895631067961 -0.0817711165048543 wt_plus_gamma_10_min 937 induced 0.4 0.133925037341299 0.0535700149365196 wt_plus_gamma_20_min 938 induced -0.13 0.110882188200149 -0.0144146844660194 wt_plus_gamma_30_min 939 bimodal 0.29 0.104173356982823 0.0302102735250187 wt_plus_gamma_45_min 940 repressed -0.25 0.095659073935773 0.0239147684839432 wt_plus_gamma_60_min 941 repressed 0.33 0.109566374159821 -0.0361569034727409 DES460 (wt) - mock irradiation - 30 min 945 induced 0.28 0.0981544062733383 0.0274832337565347 mec1_plus_gamma_20_min 950 repressed -0.49 0.107359503360717 0.0526061566467513 mec1_plus_gamma_30_min 951 repressed 0.05 0.135928864824496 -0.0067964432412248 mec1_plus_gamma_45_min 952 repressed -0.18 0.166306945481703 0.0299352501867065 mec1_plus_gamma_60_min 953 repressed -0.78 0.184784353995519 0.144131796116505 mec1_plus_gamma_90_min 954 repressed 0.106 0.138806478715459 -0.0147134867438387 DES460 + 0.02% MMS - 5 min 966 induced -0.145 0.132087378640777 -0.0191526699029127 100 microM BCS 30 min 967 induced -0.24 0.105133028379388 -0.0252319268110531 wt-gal 973 induced 0.369 0.111211258401792 0.0410369543502612 wt+gal 974 repressed 0.246 0.102951829723674 -0.0253261501120238 gal1+gal 975 induced 0.382 0.0968787341299477 0.03700767643764 gal3+gal 977 bimodal -0.316 0.11492998506348 -0.0363178752800597 gal4+gal 978 induced -0.485 0.0963386855862584 -0.0467242625093353 gal5+gal 979 induced 0.598 0.132042102315161 0.0789611771844663 gal7+gal 981 induced -0.189 0.126890870052278 -0.0239823744398805 gal10+gal 982 induced 0.057 0.142204536967886 0.0081056586071695 gal2-gal 985 induced 0.565 0.118132935026139 0.0667451082897685 gal3-gal 986 induced -0.352 0.149679331590739 -0.0526871247199401 gal4-gal 987 induced 0.395 0.154416075429425 0.0609943497946229 gal5-gal 988 bimodal -0.023 0.109124346527259 -0.00250985997012696 gal10-gal 991 induced -0.336 0.14200569454817 -0.0477139133681851 gal1gal10+gal 993 induced 0.425 0.17810072815534 0.0756928094660195 gal2gal80-gal 994 repressed 0.691 0.103613704256908 -0.0715970696415234 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0 0.134805825242718 0 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed -0.08 0.112037434652726 0.00896299477221808 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0 0.131114171023152 0 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0.16 0.152914955190441 -0.0244663928304706 YAL003W 1008 induced 0.17531 0.117072908887229 0.0205240516570201 YAL038W 1010 induced -0.066685 0.139864637789395 -0.00932687337098581 YBL020W 1013 induced 0.076282 0.159279779686333 0.0121501801540329 YBL040C 1014 induced 0.043232 0.111122106049291 0.00480403088872295 YBL084C 1015 induced -0.037809 0.115138162808066 -0.00435325879761017 YBR002C 1016 induced 0.15451 0.12297003360717 0.0190000998926438 YBR088C 1018 induced -0.14542 0.158766803584765 -0.0230878685772965 YBR143C 1020 induced -0.05293 0.131141243465273 -0.0069413060166169 YBR192W 1022 induced -0.035681 0.0997624159820762 -0.00355962276465646 YBR196C 1024 induced -0.085222 0.132188200149365 -0.0112653427931292 YBR234C 1025 induced -0.0036892 0.097896284540702 -0.000361158972927558 YBR243C 1026 induced 0.20868 0.0979116878267364 0.0204322110156834 YCR042C 1029 induced 0.18077 0.107813200149365 0.0194893921910007 YDL047W 1032 induced -0.077274 0.131024085138163 -0.0101247551549664 YDL055C 1033 induced 0.1501 0.142082244212099 0.0213265448562361 YDL064W 1035 induced -0.20734 0.101525858849888 -0.0210503715739358 YDL132W 1037 induced -0.019478 0.126710231516057 -0.00246806188946976 YDR047W 1039 induced 0.35454 0.130666542195668 0.0463265158700521 YDR062W 1040 induced 0.056054 0.118664115011202 0.00665159830283792 YDR141C 1042 induced 0.21931 0.1584428678118 0.0347481053398059 YDR373W 1045 induced -0.039741 0.11627287154593 -0.0046208001881068 YDR464W 1046 induced 0.47229 0.106322815533981 0.0502152025485439 YDR489W 1047 induced -0.11742 0.165425224047797 -0.0194242298076923 YER023W 1049 induced 0.03234 0.139832897684839 0.00452219591112769 YER172C 1050 induced -0.045705 0.12245145631068 -0.00559664381067963 YFL005W 1051 induced 0.094534 0.129099607916356 0.0122043023347648 YFL024C 1052 induced 0.10729 0.123225821508589 0.0132208983896565 YGL048C 1054 induced -0.1496 0.116942214339059 -0.0174945552651232 YGL116W 1055 induced -0.055422 0.130730955937267 -0.00724537103995521 YGL245W 1056 induced -0.0077594 0.102282486930545 -0.000793650729088871 YGR048W 1057 induced 0.28316 0.145191840926064 0.0411125216766243 YGR060W 1058 induced 0.040946 0.112735250186706 0.00461605755414486 YGR094W 1059 induced 0.38195 0.101624346527259 0.0388154191560866 YGR172C 1061 induced -0.11209 0.110011669156087 -0.0123312079957058 YGR175C 1062 induced -0.027787 0.140957337565347 -0.0039167815389283 YHR090C 1068 induced -0.10346 0.113057785660941 -0.011696958504481 YHR118C 1069 induced 0.04145 0.126789115011202 0.00525540881721432 YHR188C 1070 induced 0.38724 0.13135782300224 0.0508670033793874 YIR022W 1076 induced 0.19047 0.121997292755788 0.0232368243511949 YJL081C 1082 induced 0.15145 0.139828696788648 0.0211770561286407 YJL091C 1083 induced 0.21473 0.113016710231516 0.0242680781880134 YJL194W 1084 induced 0.26637 0.151512789395071 0.0403584617111651 YKL018W 1088 induced 0.18495 0.124475821508589 0.0230218031880135 YKL052C 1089 induced -0.095912 0.149124813293503 -0.0143028590926065 YKR079C 1094 induced 0.00074527 0.143366784914115 0.000106846963792942 YKR086W 1095 induced 0.028165 0.135395351008215 0.00381341006114638 YLL003W 1096 induced 0.042593 0.107584951456311 0.00458236583737865 YLR076C 1101 induced 0.010629 0.13830283793876 0.00147002086445108 YLR086W 1102 induced -0.094522 0.160045276325616 -0.0151277996088499 YLR101C 1103 induced 0.00055445 0.128907300224048 0.0000714726526092234 YLR163C 1105 induced 0.022246 0.150065814040329 0.00333836409914116 YLR275W 1108 induced 0.097823 0.0995934466019417 0.00974252972694174 YLR291C 1109 induced 0.20401 0.124678864824496 0.0254357352128454 YLR359W 1112 induced -0.032273 0.134399738610904 -0.00433748276418971 YLR378C 1113 induced 0.3553 0.130492438386856 0.0463639633588499 YLR440C 1115 induced 0.27809 0.137712378640777 0.0382964353762137 YLR457C 1116 induced -0.036611 0.105069548170276 -0.00384670122806197 YLR459W 1117 induced 0.25861 0.166669622852875 0.043102431165982 YML031W 1118 induced -0.060512 0.114718073188947 -0.00694182004480956 YML046W 1119 induced -0.085214 0.119579443614638 -0.0101898427081778 YML130C 1120 induced 0.050167 0.13426717699776 0.00673578146844663 YMR001C 1121 induced -0.0031967 0.10369072068708 -0.000331468126820389 YMR043W 1122 induced 0.080975 0.143934839432412 0.0116551236230396 YMR076C 1123 induced -0.060504 0.131294342793129 -0.00794383291635548 YMR079W 1124 induced 0.46935 0.15133355115758 0.0710284022358102 YMR200W 1126 induced 0.19557 0.128466206123973 0.0251241359316654 YMR239C 1128 induced 0.074735 0.115372012696042 0.0086223273688387 YNL131W 1131 induced 0.20446 0.109779686333084 0.0224455546676624 YNL158W 1133 induced 0.10519 0.15049430545183 0.015830495990478 YNL272C 1136 induced 0.0036198 0.135481702763256 0.000490416667662434 YNL310C 1137 induced 0.11259 0.131994025392084 0.0148612073188947 YNR035C 1138 induced 0.42925 0.139532300224048 0.0598942398711726 YNR043W 1139 induced -0.061717 0.154523431665422 -0.00953672263209485 YOR168W 1153 induced 0.34518 0.109586911874533 0.0378272102408513 YOR204W 1155 induced 0.09055 0.139520164301718 0.0126335508775206 YOR232W 1157 induced 0.031545 0.13555498506348 0.00427608200382748 YOR236W 1158 induced -0.0020884 0.115298263629574 -0.000240788893764002 YOR259C 1159 induced -0.22661 0.135470500373413 -0.0306989700896191 YOR261C 1160 induced -0.086057 0.150227781926811 -0.0129281522292756 YOR281C 1162 induced 0.15189 0.101480582524272 0.0154138856796117 YOR335C 1164 induced 0.059942 0.144956590739358 0.0086889879620986 YPL010W 1166 induced -0.037463 0.156818054518297 -0.00587487477641896 YPL063W 1167 induced 0.0016522 0.120924663928305 0.000199791729742346 YPL076W 1168 induced 0.10877 0.115177371172517 0.0125278426624347 YPL231W 1173 induced 0.14327 0.134776885735624 0.0193094844193429 YPL243W 1174 induced -0.019979 0.139277445855116 -0.00278262409073936 YPR033C 1175 induced 0.16782 0.100779499626587 0.0169128156273338 YPR169W 1178 induced 0.088693 0.107210604929052 0.00950883018297241 YPR178W 1179 induced 0.036394 0.151913274831964 0.0055287317242345 YPR180W 1180 induced -0.046435 0.114008121732636 -0.00529396713265495 YBR029C 1182 induced 0.3218 0.157966299477222 0.05083355517177 YDR054C 1183 induced -0.09566 0.112444454817028 -0.0107564365477969 YDR527W 1187 induced 0.15285 0.101689693801344 0.0155432696975354 YFR037C 1190 induced 0.3432 0.160652072442121 0.0551357912621359 YGL073W 1191 induced 0.042814 0.122421583271098 0.00524135766616879 YGL122C 1192 induced 0.09699 0.107617625093353 0.0104378334578043 YGR198W 1196 induced 0.14771 0.152209204630321 0.0224828216159447 YHR205W 1201 induced 0.014245 0.10834858103062 0.00154342553678118 YJL097W 1202 induced 0.20248 0.150702483196415 0.0305142387976101 YKL033W 1204 induced 0.13511 0.128988517550411 0.017427638606236 YLR005W 1207 induced 0.0783 0.1221928678118 0.00956770154966394 YLR008C 1208 induced 0.038264 0.128433532486931 0.00491438068707993 YLR229C 1211 induced 0.15365 0.120732356235997 0.0185505265356609 YMR235C 1212 induced 0.38416 0.125225448095594 0.0481066081404034 YNL149C 1213 induced 0.10567 0.136458644510829 0.0144195849654593 YNL222W 1214 induced 0.096453 0.115351474981329 0.0111259958163741 YNL245C 1215 induced -0.042723 0.114641990291262 -0.00489784975121359 YNL258C 1216 induced 0.043674 0.155367811799851 0.00678553381254669 YOR077W 1220 induced 0.10982 0.121699962658701 0.0133650898991785 YPL075W 1221 induced -0.027888 0.108705657206871 -0.00303158336818522 YPR019W 1222 induced -0.010072 0.100409820761763 -0.00101132771471248 BYE1OE+ 1225 induced 0.038899 0.105126960418223 0.00408933363330846 CRZ1OE+ 1227 induced -0.0767765 0.127309559372666 -0.00977438238517549 CUP2OE+ 1229 repressed 0.1186055 0.1004821695295 -0.0119177379581311 GAT3OE+ 1231 induced -0.2270685 0.11731002613891 -0.0266374116703231 GAT4OE+ 1232 induced -0.073976 0.181353155339806 -0.0134157810194175 GIS1OE+ 1234 induced -0.0134475 0.139852035100822 -0.0018806602420183 HAC1OE+ 1237 repressed 0.063666 0.124437546676624 -0.00792244084671394 HMS1OE+ 1239 induced -0.0398775 0.167863610903659 -0.00669398114381066 MBP1OE+ 1242 induced -0.12113 0.127464058999253 -0.0154397214665795 MGA1OE+ 1245 induced 0.084664 0.136060492905153 0.0115194255713219 MIG1OE+ 1246 induced -0.09442 0.129898711725168 -0.0122650363610904 RAP1OE+ 1252 induced -0.09396 0.111398898431665 -0.0104670404966392 RFX1OE+ 1253 induced -0.0036235 0.119568707991038 -0.000433257213405526 RME1OE+ 1255 induced -0.0590135 0.133527352501867 -0.00787991641686893 ROX1OE+ 1256 induced 0.061868 0.178216019417476 0.0110258686893204 SFP1OE+ 1258 repressed -0.10744 0.111205657206871 0.0119479358103062 SKN7OE+ 1260 induced 0.0521105 0.167479929051531 0.00872746284283981 SOK2OE+ 1261 bimodal 0.164836 0.123501680358476 0.0203575229835698 SPS18OE+ 1262 induced 0.1262275 0.103897031366692 0.0131146625268391 STP2OE+ 1265 induced 1.7755125 0.185449495892457 0.329267898075756 SUT1OE+ 1267 induced -0.050377 0.125618932038835 -0.00632830493932039 SWI4OE+ 1268 induced 0.0698625 0.125228248693055 0.00874875852431855 TOS8OE+ 1269 induced 0.183314 0.113855955937267 0.0208713907066842 UPC2OE+ 1270 induced 0.0166445 0.164780153099328 0.00274268325826176 XBP1OE+ 1271 induced -0.0234845 0.140989077669903 -0.00331105799453884 YHP1OE+ 1273 induced 0.0386225 0.137141990291262 0.00529676652002427 YOX1OE+ 1274 induced -0.059851 0.167092046303211 -0.0100006260632935 YPR015COE+ 1275 induced 0.0154135 0.129607449589246 0.00199770442424384 WT/cst6+ 1282 induced 0.0594975 0.106547796863331 0.00633932754387604 WT/sok2+ 1312 induced -0.034969 0.12056712098581 -0.00421611165375279