Sum1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 5. Expression during the cell cycle (alpha factor arrest and release)(4) 9 repressed 0.23 0.100406086631815 -0.0230933999253174 0.0121875704901307 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 induced 0.02 0.0987556011949216 0.00197511202389843 6. Expression during the cell cycle (cdc15 arrest and release)(9) 32 induced -0.29 0.0982538274831964 -0.028493609970127 6. Expression during the cell cycle (cdc15 arrest and release)(23) 46 repressed 0 0.103251493651979 0 6. Expression during the cell cycle (cdc15 arrest and release)(24) 47 repressed -0.47 0.119646657953697 0.0562339292382376 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.08 0.0985889656460045 -0.00788711725168036 8. Expression during the cell cycle (cell size selection and release)(5) 69 induced -0.09 0.105245052277819 -0.00947205470500371 8. Expression during the cell cycle (cell size selection and release)(12) 76 repressed 0.22 0.10529359596714 -0.0231645911127708 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 repressed 0.434 0.120481235997013 -0.0522888564227036 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 repressed -0.433 0.113621172516804 0.0491979676997761 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(5) 83 induced -0.433 0.119263442867812 -0.0516410707617626 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(6) 84 induced 0 0.135649738610904 0 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 induced 0.396 0.128320575056012 0.0508149477221808 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(1) 86 induced -1.17 0.128741598207618 -0.150627669902913 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(2) 87 repressed -0.176 0.114480955937267 0.020148648244959 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -0.164 0.125885455563854 0.0206452147124721 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 repressed -0.377 0.145532580283794 0.0548657827669903 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 repressed -0.889 0.154869772218073 0.137679227501867 12. Expression in tup1-deleted cells(1) 96 induced -0.286 0.106764376400299 -0.0305346116504855 27. Young: Expression in rpb1 mutant(1) 111 repressed -0.139 0.13464712471994 0.0187159503360717 28. Young: Expression in srb4 mutant(1) 112 repressed -0.139 0.141542662434653 0.0196744300784168 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.132092513069455 0 32. Young: Expression in swi2 mutant(1) 116 repressed -0.027 0.119606982823002 0.00322938853622105 34. Young: Expression in taf17 mutant(1) 118 repressed 0 0.135923263629574 0 35. Young: Expression in tfa1 mutant(1) 119 repressed -0.749 0.111801717699776 0.0837394865571322 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.13096853995519 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(6) 127 repressed 0 0.111135175504108 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(7) 128 repressed 0.036 0.114726474981329 -0.00413015309932784 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed -0.589 0.132460324869305 0.0780191313480206 44. Expression in snf2 mutant cells in YPD(1) 134 repressed -0.159 0.124255974607916 0.0197566999626586 45. Expression in snf2 mutant cells in minimal medium(1) 135 repressed 0.113 0.113054518297237 -0.0127751605675878 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(5) 142 induced 0.081 0.0986151045556385 0.00798782346900672 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 induced 0.063 0.119400205377147 0.00752221293876026 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(3) 155 induced -0.005 0.108183812546677 -0.000540919062733385 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 induced 0.012 0.0995421023151606 0.00119450522778193 55. Expression in response to overproduction of Ste11p(1) 160 induced 0.053 0.120384615384615 0.0063803846153846 73. Expression in response to overproduction of activated Pkc1p(1) 178 repressed -0.04 0.117150392083645 0.0046860156833458 79. Expression in fus3 deletion mutant cells(1) 185 induced 0.021 0.132955563853622 0.00279206684092606 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 repressed -0.052 0.107324029126214 0.00558084951456313 88. Expression in response to DNA damage by MMS(1) 194 repressed 0 0.145126960418223 0 90. Expression in his3 mutant cells(1) 196 repressed -1.05 0.123814880507842 0.130005624533234 95. Expression in response to 50ug/mL FK506(1) 201 repressed 0.033 0.107094380134429 -0.00353411454443616 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 repressed 0 0.106752707244212 0 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.12248646377894 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 repressed 0 0.134215832710978 0 103. Young: Expression in taf60 deletion mutant(1) 209 repressed 0 0.118582430918596 0 105. Young: Expression in taf90 deletion mutant(1) 211 repressed 0 0.106624346527259 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 repressed -0.1 0.143203883495146 0.0143203883495146 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 repressed -0.06 0.15337285287528 0.0092023711725168 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(4) 216 repressed 0.44 0.152120519044063 -0.0669330283793877 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(7) 219 repressed -0.6 0.104063666915609 0.0624382001493654 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(8) 220 repressed -0.45 0.126675224047797 0.0570038508215086 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(9) 221 repressed -0.15 0.100313200149365 0.0150469800224048 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(10) 222 repressed -0.36 0.148374719940254 0.0534148991784914 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(14) 226 repressed -0.92 0.104982262882748 0.0965836818521282 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 repressed 0.16 0.15181712098581 -0.0242907393577296 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed -0.176 0.120357542942494 0.0211829275578789 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 induced 0.206 0.100442494398805 0.0206911538461538 156. Rosetta 2000: Expression in ecm29 deletion mutant (1) 275 induced -0.05 0.0984055265123226 -0.00492027632561613 165. Rosetta 2000: Expression in erg6 deletion mutant (1) 284 repressed -0.036 0.104414208364451 0.00375891150112024 168. Rosetta 2000: Expression in far1 (haploid) deletion mutant (1) 287 induced 0.066 0.0978608103061987 0.00645881348020911 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced 0.07 0.132955563853622 0.00930688946975354 227. Rosetta 2000: Expression in ppr1 deletion mutant (1) 346 induced -0.143 0.113682785660941 -0.0162566383495146 236. Rosetta 2000: Expression in rgt1 deletion mutant (1) 355 repressed -0.02 0.0973039581777446 0.00194607916355489 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 repressed -0.116 0.12963358849888 0.0150374962658701 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 induced 0.013 0.106369025392084 0.00138279733009709 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 repressed -0.106 0.111327016430172 0.0118006637415982 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 repressed -0.229 0.13583644510829 0.0311065459297984 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 repressed -0.036 0.10827716579537 0.00389797796863332 305. Rosetta 2000: Expression in yar014c deletion mutant (1) 424 induced -0.193 0.103522684839432 -0.0199798781740104 308. Rosetta 2000: Expression in yel001c deletion mutant (1) 427 induced -0.057 0.0960133495145631 -0.0054727609223301 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 repressed 0.036 0.156224794622853 -0.00562409260642271 329. Rosetta 2000: Expression in yer083c deletion mutant (1) 448 repressed 0 0.124426344286781 0 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 bimodal -0.003 0.104831964152353 -0.000314495892457059 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 repressed 0.023 0.114083737864078 -0.00262392597087379 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 induced 0.06 0.100398151605676 0.00602388909634056 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 repressed -0.508 0.109803958177745 0.0557804107542945 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 repressed 0.362 0.119040328603435 -0.0430925989544435 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.053 0.111418035847647 -0.00590515589992529 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 repressed 0.02 0.113800410754294 -0.00227600821508588 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 repressed -0.34 0.116186986557132 0.0395035754294249 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 repressed 0.18 0.163174943988051 -0.0293714899178492 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 induced -0.03 0.141337285287528 -0.00424011855862584 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 repressed -0.07 0.120189507094847 0.00841326549663929 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(2) 541 repressed 0 0.116097367438387 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced 0.07 0.107082710978342 0.00749578976848394 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(5) 561 induced 0.946 0.100563386855863 0.0951329639656464 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(6) 562 induced 1.495 0.119828230022405 0.179143203883496 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(7) 563 induced 1.635 0.0963895631067961 0.157596935679612 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(3) 566 induced 1.28 0.100358476474981 0.128458849887976 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(4) 567 induced 1.092 0.115174570575056 0.125770631067961 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(5) 575 induced 0.523 0.122309559372666 0.0639678995519043 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(6) 576 induced -0.973 0.102930825242718 -0.100151692961165 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 repressed 0.454 0.100496639283047 -0.0456254742345033 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 repressed 0 0.102113984316654 0 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 repressed -0.291 0.115725821508589 0.0336762140589994 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 repressed 0 0.137861743838686 0 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 repressed -0.531 0.124104742345034 0.0658996181852131 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 repressed 0 0.129590179238237 0 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 repressed -0.07 0.10748786407767 0.0075241504854369 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 repressed -0.666 0.118638909634055 0.0790135138162806 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 repressed 0 0.127780993278566 0 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 repressed 0 0.123060119492158 0 444. Expression in wild type versus strain YHE710 (mks1 deletion) under steady state conditions in YPD(1) 601 induced -0.244 0.111298076923077 -0.0271567307692308 445. Expression in response to 0.1% MMS for 60 min (average of 3 experiments)(1) 602 repressed 0 0.140890589992532 0 447. Expression in response to 0.1% MMS for 30 min(1) 604 repressed 0 0.116909540702016 0 448. Expression in response to 0.1% MMS for 60 min(1) 605 repressed 0 0.128442401045556 0 449. Expression in response to 0.1% MMS for 60 min(1) 606 repressed 0 0.138900298730396 0 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 repressed 0.014 0.155372479462285 -0.00217521471247199 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 repressed -0.696 0.15225354742345 0.105968469006721 455. Expression in response to high MNNG (27 microgram/ml) for 60 min(1) 612 repressed -0.696 0.131693894697535 0.0916589507094844 456. Expression in response to high 4NQO (8 microgram/ml) for 60 min(1) 613 repressed -0.696 0.109673730395818 0.0763329163554893 457. Expression of G1 arrested cells (with alpha factor) in response to 0.1% MMS for 60 min(1) 614 repressed 0 0.112896284540702 0 458. Expression of S arrested cells (with hydroxyurea) in response to 0.1% MMS for 60 min(1) 615 repressed 0 0.147317027632562 0 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed 0.485 0.133932972367438 -0.0649574915982074 461. Expression of rpn4 deletion in response to 0.1% MMS for 60 min(1) 618 repressed 0 0.149421209858103 0 462. Expression in response to 0.05% MMS for 60 min(1) 619 repressed -0.696 0.10070715085885 0.0700921769977596 463. Expression in response to 0.1% MMS for 60 min(1) 620 repressed -0.696 0.116927744585512 0.0813817102315163 464. Expression in response to 0.2% MMS for 60 min(1) 621 repressed 0.035 0.139780153099328 -0.00489230535847648 465. Expression in rpd3 deletion(1) 622 repressed -0.561 0.0986622479462285 0.0553495210978342 474. Expression in hda1 deletion(1) 631 induced -0.203 0.104901045556385 -0.0212949122479462 475. Expression in hos2 deletion(1) 632 induced -0.477 0.106502987303958 -0.050801924943988 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 repressed -1.061 0.109542569081404 0.11622466579537 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 repressed -1.434 0.156242998506348 0.224052459858103 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 repressed -1.455 0.117404779686333 0.170823954443615 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(3) 645 repressed 0 0.10077996639283 0 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 repressed 1.52 0.119351661687827 -0.181414525765497 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 repressed -1.397 0.101575802837939 0.141901396564601 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed -1.073 0.142335231516057 0.152725703416729 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(5) 651 repressed 0 0.103251026885736 0 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 repressed 0.399 0.111775112023898 -0.0445982696975353 481. Expression in response to heat shock: 15,30,45,60,120 min(5) 656 repressed 0.587 0.0986781179985063 -0.0579240552651232 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 repressed 0.423 0.109242438386856 -0.0462095514376401 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 repressed -0.156 0.105138629574309 0.0164016262135922 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 repressed -0.156 0.108955377147125 0.0169970388349515 483. Expression in response to alkali: 10,20,40,60,80,100 min(3) 665 repressed -0.156 0.107222740851382 0.0167267475728156 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 repressed -0.156 0.100475168035848 0.0156741262135923 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 repressed -0.156 0.120294062733383 0.0187658737864077 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 repressed 0.138 0.106960884988798 -0.0147606021284541 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 repressed -0.379 0.097318427931292 0.0368836841859597 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 repressed -0.379 0.159097740851382 0.0602980437826738 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 repressed -0.379 0.170810772964899 0.0647372829536967 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 repressed -0.978 0.116432038834951 0.113870533980582 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 repressed -0.94 0.104642923823749 0.0983643483943241 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 repressed -0.58 0.129713405526512 0.075233775205377 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 repressed -0.1 0.132701643017177 0.0132701643017177 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 repressed -0.1 0.119440814040329 0.0119440814040329 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 repressed -0.07 0.134246172516804 0.00939723207617628 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 repressed -0.01 0.140509708737864 0.00140509708737864 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 repressed -0.14 0.132731982823002 0.0185824775952203 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 induced -0.4 0.153925037341299 -0.0615700149365196 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 induced 0.03 0.149893110530246 0.00449679331590738 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 induced 0 0.117757654966393 0 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 repressed 0.28 0.121290608663181 -0.0339613704256907 501. Brown enviromental changes :Heat Shock 030inutes hs-2(1) 699 repressed 0.51 0.103820481702763 -0.0529484456684091 503. Brown enviromental changes :37C to 25C shock - 15 min(1) 701 induced -0.45 0.103481609410007 -0.0465667242345032 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 induced 0.51 0.117456590739358 0.0599028612770726 505. Brown enviromental changes :37C to 25C shock - 45 min(1) 703 induced -0.89 0.132274085138163 -0.117723935772965 506. Brown enviromental changes :37C to 25C shock - 60 min(1) 704 induced -0.45 0.117866878267364 -0.0530400952203138 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced 0.37 0.157569081404033 0.0583005601194922 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 repressed -0.42 0.124788088125467 0.0524109970126961 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 repressed -0.07 0.141952483196415 0.00993667382374905 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 repressed -0.15 0.129132748319642 0.0193699122479463 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 repressed 0 0.133965646004481 0 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 repressed -1.25 0.0992816467513069 0.124102058439134 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 repressed -0.29 0.125679144884242 0.0364469520164302 542. Brown enviromental changes :2.5mM DTT 005 min dtt-1(1) 740 induced -0.38 0.109782020164302 -0.0417171676624348 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 repressed -0.42 0.119579443614638 0.050223366318148 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 repressed -0.79 0.133787808065721 0.10569236837192 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 induced -0.64 0.155239451082898 -0.0993532486930547 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 induced 0.19 0.132109783420463 0.025100858849888 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 repressed -0.71 0.131698095593727 0.0935056478715462 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 repressed 0 0.143602035100822 0 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -0.38 0.1209321321882 -0.045954210231516 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 repressed 0.2 0.110906926811053 -0.0221813853622106 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 repressed -0.07 0.139235436893204 0.00974648058252428 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 repressed 0.15 0.124145817774459 -0.0186218726661689 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 repressed 0.18 0.130315533980583 -0.0234567961165049 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 repressed -0.34 0.117605489171023 0.0399858663181478 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 repressed -0.06 0.108501213592233 0.00651007281553398 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 repressed -0.22 0.129672796863331 0.0285280153099328 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 repressed -0.23 0.154849234503361 0.035615323935773 578. Brown enviromental changes :aa starv 0.5 h(1) 776 repressed -0.17 0.132090646004481 0.0224554098207618 579. Brown enviromental changes :aa starv 1 h(1) 777 repressed 0 0.136292475728155 0 582. Brown enviromental changes :aa starv 6 h(1) 780 repressed 0.01 0.111392363704257 -0.00111392363704257 583. Brown enviromental changes :Nitrogen Depletion 30 min.(1) 781 repressed 0.08 0.152726381628081 -0.0122181105302465 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 repressed 0.04 0.133174477221807 -0.00532697908887228 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed -0.1 0.130229648991785 0.0130229648991785 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 repressed -0.45 0.150816840926064 0.0678675784167288 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 repressed -0.36 0.143947442120986 0.051821079163555 589. Brown enviromental changes :Nitrogen Depletion 1 d(1) 787 repressed 0.07 0.144701269604182 -0.0101290888722927 590. Brown enviromental changes :Nitrogen Depletion 2 d(1) 788 repressed -0.14 0.1337607356236 0.018726502987304 591. Brown enviromental changes :Nitrogen Depletion 3 d(1) 789 repressed -0.47 0.120993278566094 0.0568668409260642 592. Brown enviromental changes :Nitrogen Depletion 5 d(1) 790 repressed -0.1 0.126405433159074 0.0126405433159074 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 repressed 0.12 0.131570201643017 -0.015788424197162 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 repressed 0.1 0.146504854368932 -0.0146504854368932 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 repressed 0.12 0.148483476474981 -0.0178180171769977 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 repressed 0.87 0.146730302464526 -0.127655363144138 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 repressed 0.44 0.145364077669903 -0.0639601941747573 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 repressed 0.43 0.128819081404033 -0.0553922050037342 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 repressed 0.37 0.130086351755041 -0.0481319501493652 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 repressed -0.07 0.127843073188947 0.00894901512322629 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 repressed -0.62 0.163139002987304 0.101146181852128 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 repressed -0.45 0.14909213965646 0.067091462845407 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 repressed -0.62 0.16749859970127 0.103849131814787 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 repressed -0.18 0.165345407020164 0.0297621732636295 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 repressed 0.01 0.156552931292009 -0.00156552931292009 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 repressed -0.58 0.138218353248693 0.0801666448842419 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 repressed -0.2 0.164062733383122 0.0328125466766244 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 repressed -0.12 0.164266710231516 0.0197120052277819 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 repressed -0.64 0.151761109036594 0.0971271097834202 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 repressed -0.32 0.159952389843167 0.0511847647498134 624. Brown enviromental changes :DBYmsn2-4- 37degree heat - 20 min(1) 815 repressed -0.27 0.154685399551904 0.0417650578790141 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 repressed -0.25 0.151626680358476 0.037906670089619 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 repressed 0.14 0.117008495145631 -0.0163811893203883 629. Brown enviromental changes :DBYmsn2msn4 (good strain) + 0.32 mM H2O2(1) 820 repressed -1.25 0.103319174757282 0.129148968446603 630. Brown enviromental changes :DBYmsn2/4 (real strain) + 0.32 mM H2O2 (20 min)(1) 821 repressed 0.16 0.11167569081404 -0.0178681105302464 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 repressed -0.29 0.115945668409261 0.0336242438386857 634. Brown enviromental changes :MSN4 overexpression(1) 825 repressed 0.18 0.126184185959671 -0.0227131534727408 636. Brown enviromental changes :ethanol car-1(1) 827 repressed 0.49 0.0955904592979836 -0.046839325056012 638. Brown enviromental changes :glucose car-1(1) 829 induced 0.36 0.0992162994772218 0.0357178678117998 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 repressed 0.08 0.126227595220314 -0.0100982076176251 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 induced 0.41 0.105151699029126 0.0431121966019417 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 induced -0.27 0.100029406273338 -0.0270079396938013 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 induced 0.07 0.10731002613891 0.0075117018297237 652. Brown enviromental changes :29 deg growth ct-1(1) 843 induced -0.06 0.109974327856609 -0.00659845967139654 656. Brown enviromental changes :steady state 21 dec C ct-2(1) 847 induced -0.76 0.100832710978342 -0.0766328603435399 657. Brown enviromental changes :steady state 25 dec C ct-2(1) 848 induced -0.07 0.104290515309933 -0.00730033607169531 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 repressed -0.401 0.100647404779686 0.0403596093166541 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 induced 0.287 0.131446975354742 0.037725281926811 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 induced 0.401 0.162663368185213 0.0652280106422704 ( trp- 2% Glucose-203792) fus3 (+Fus3K42R) 5mM aF, 30 min. 899 repressed -0.25 0.103062453323376 0.025765613330844 ( trp- 2% Glucose-203390) fus3 (+Fus3K42R) 5mM aF, 30 min. 900 repressed 0.02 0.10492998506348 -0.0020985997012696 trp- 2% Glucose-Average fus3 (+Fus3T180A,Y182F) 5mM aF, 30 min. 905 repressed -0.05 0.107846807318895 0.00539234036594475 Addition of 1M NaCl (90) 917 repressed -0.36 0.124701269604182 0.0448924570575055 DES460 + 0.02% MMS - 30 min 921 repressed 0.28 0.119111277072442 -0.0333511575802838 DES460 + 0.2% MMS - 45 min 922 repressed -0.017 0.101696228528753 0.0017288358849888 DES460 + 0.02% MMS - 60 min 923 repressed -0.099 0.107979835698282 0.0106900037341299 DES460 + 0.02% MMS - 90 min 924 repressed -0.022 0.104294249439881 0.00229447348767738 DES460 + 0.02% MMS - 120 min 925 repressed -0.343 0.106447908887229 0.0365116327483196 dun1- + 0.02% MMs - 30 min 933 repressed -0.225 0.113434932785661 0.0255228598767737 wt_plus_gamma_10_min 937 repressed -0.441 0.114581310679612 0.0505303580097089 wt_plus_gamma_20_min 938 repressed 0.451 0.127922423450336 -0.0576930129761015 wt_plus_gamma_30_min 939 repressed -0.014 0.115038274831964 0.0016105358476475 DES460 (wt) - mock irradiation - 5 min 944 repressed 0.612 0.101404032860344 -0.0620592681105305 mec1_plus_gamma_10_min 949 repressed 0.037 0.106433905899925 -0.00393805451829723 mec1_plus_gamma_20_min 950 repressed 0.123 0.108568427931292 -0.0133539166355489 DES459 (mec1) + heat 20 min 961 repressed 0.11 0.150845780433159 -0.0165930358476475 MHY1 (dun1) + heat 20 min 962 repressed -0.23 0.171441374159821 0.0394315160567588 DES460 + 0.02% MMS - 5 min 966 repressed 0.494 0.103855955937267 -0.0513048422330099 wt-gal 973 repressed 0 0.0986473114264376 0 gal1+gal 975 repressed 0.249 0.107848674383869 -0.0268543199215834 gal2+gal 976 repressed -0.449 0.0975527445855116 0.0438011823188947 gal3+gal 977 repressed 0.352 0.117248879761016 -0.0412716056758776 gal7+gal 981 repressed -0.309 0.140080750560119 0.0432849519230768 gal10+gal 982 repressed 0.439 0.107756254667662 -0.0473049957991036 gal2-gal 985 repressed 0.369 0.100661874533234 -0.0371442317027633 gal3-gal 986 repressed 0.282 0.0966761575802838 -0.02726267643764 gal4-gal 987 repressed 0.545 0.0969006721433906 -0.0528108663181479 gal6-gal 989 repressed 0.342 0.0994669529499627 -0.0340176979088873 gal80-gal 992 repressed 1.206 0.113512415982076 -0.136895973674384 gal1gal10+gal 993 repressed 0.498 0.115262322628827 -0.0574006366691558 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced 0 0.113995052277819 0 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed 0.35 0.164147684839432 -0.0574516896938012 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed -0.09 0.107271751306945 0.00965445761762505 sfp1::GALSFP1 t=30min GAL vs. t=0 RAFF (YT00271) 1003 induced -0.38 0.149260642270351 -0.0567190440627334 sfp1::GALSFP1 t=50min GAL vs. t=0 RAFF (YT00265) 1005 induced -0.14 0.169670929798357 -0.02375393017177 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 induced 0.25 0.146430638536221 0.0366076596340552 sfp1::GALSFP1 t=90min GAL vs. t=0 RAFF (YT00266) 1007 induced -0.15 0.15465786034354 -0.023198679051531 YAL003W 1008 repressed 0.050045 0.0979424943988051 -0.0049015321321882 YBL020W 1013 repressed 0.081741 0.0982164861837192 -0.00802831379714339 YBL040C 1014 repressed 0.023711 0.103865758028379 -0.00246276098861089 YBR193C 1023 repressed -0.015322 0.0997838872292756 0.00152888872012696 YDR091C 1041 repressed -0.017516 0.0974519230769231 0.00170696788461539 YGL048C 1054 repressed 0.2606 0.0975420089619119 -0.0254194475354742 YGR048W 1057 repressed 0.044426 0.142199402539208 -0.00631735065720685 YLR424W 1114 repressed 0.064544 0.116008215085885 -0.00748763423450336 YLR440C 1115 repressed 0.14016 0.123474607916355 -0.0173062010455563 YML046W 1119 repressed 0.11108 0.0979070201643017 -0.0108755117998506 YNR035C 1138 repressed 0.13935 0.104704536967886 -0.0145905772264749 YPL010W 1166 repressed 0.13775 0.0954410941000747 -0.0131470107122853 YPL231W 1173 repressed 0.089548 0.128875560119492 -0.0115405486575803 YPL243W 1174 repressed 0.061761 0.127338032113518 -0.00786452420136298 YPR033C 1175 repressed -0.039744 0.119795556385362 0.00476115459297983 YPR178W 1179 repressed 0.0051512 0.103869492158327 -0.000535052528005974 YDR527W 1187 repressed 0.012004 0.135346340552651 -0.00162469747199402 YGL073W 1191 repressed 0.06971 0.108232356235997 -0.00754487755321135 YMR235C 1212 repressed -0.11049 0.095773431665422 0.0105820064647125 YNL149C 1213 repressed 0.029265 0.101902072442121 -0.00298216415001867 YOL005C 1218 repressed -0.14239 0.126567401045556 0.0180219322348767 HAP4OE+ 1238 repressed -0.101269 0.0975569454817028 0.00987949431198656 ROX1OE+ 1256 repressed 0.086903 0.119751680358476 -0.0104067802781926 SFP1OE+ 1258 induced 0.2230665 0.226657486930545 0.0505596923083924