Tbs1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 bimodal -0.74 0.184501493651979 -0.136531105302464 0.0109839271399962 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.2 0.184141616878267 -0.0368283233756534 mec1_plus_gamma_45_min 952 repressed 1.27 0.18207430918596 -0.231234372666169 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.04 0.180943801344287 0.00723775205377148 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.179988330843913 0 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.36 0.174694734876774 0.0628901045556386 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.54 0.174333924570575 0.0941403192681105 SKN7OE+ 1260 induced -0.0498695 0.172073842419716 -0.00858123648455003 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.135 0.17170929798357 -0.194890053211352 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced 0.24 0.17152212471994 0.0411653099327856 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced 0.146 0.17110997012696 0.0249820556385362 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0 0.170459764749813 0 12. Expression in tup1-deleted cells(1) 96 induced -0.286 0.169225168035848 -0.0483983980582525 gal10-gal 991 induced -0.329 0.166172516803585 -0.0546707580283795 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0.04 0.16195855115758 -0.0064783420463032 BY4741 GAL t=60min vs. t=0 (YT00259) 997 induced 0 0.161730769230769 0 393. Rosetta 2000: Expression in cells with RHO1 under tet promoter(1) 512 induced -0.076 0.161503920836445 -0.0122742979835698 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.422 0.160472367438387 0.0677193390589993 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0.1 0.159679798356983 -0.0159679798356983 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.08 0.15942354368932 0.0127538834951456 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 0.16 0.159095407020164 0.0254552651232262 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced 1.176 0.159035194174757 0.187025388349514 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.159020257654966 0 mec1_plus_gamma_60_min 953 repressed 0.32 0.158671116504854 -0.0507747572815533 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced 0.28 0.158534353995519 0.0443896191187453 Addition of 1M NaCl (90) 917 bimodal 1.07 0.158475541448842 0.169568829350261 27. Young: Expression in rpb1 mutant(1) 111 repressed 0 0.158107262882748 0 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 1.03 0.157102315160568 0.161815384615385 YPL063W 1167 induced 0.13942 0.156009615384615 0.021750860576923 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0.29 0.155339339058999 0.0450484083271097 PHO81c vs WT exp2(1) 584 induced -0.69 0.155116224794623 -0.10703019510829 18. parental strain versus evolved strain 3(1) 102 bimodal -0.04 0.155074682598954 -0.00620298730395816 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -0.15 0.155050877520538 -0.0232576316280807 YLR076C 1101 induced 0.19968 0.154908047050037 0.0309320388349514 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.103 0.154746545929798 0.0159388942307692 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(3) 636 induced 0.026 0.154684932785661 0.00402180825242719 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.154539768483943 0 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 0.39 0.154480489171023 0.060247390776699 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 0.66 0.153984783420463 0.101629957057506 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 1.08 0.153440067214339 0.165715272591486 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -0.17 0.153167008961912 0.026038391523525 GAT4OE+ 1232 induced 0.0921745 0.152950896191187 0.0140981723809746 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 bimodal 0.465 0.152865477968633 0.0710824472554143 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed 0 0.152605489171023 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.15234503360717 0 gal7+gal 981 induced -1.006 0.152295089619119 -0.153208860156834 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.038 0.152139189693801 0.00578128920836444 YJL097W 1202 induced 0.17913 0.15142783793876 0.0271252686099701 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed -0.75 0.151112303958178 0.113334227968634 469. Expression in hda1 deletion(1) 626 induced 0.337 0.151043689320388 0.0509017233009708 28. Young: Expression in srb4 mutant(1) 112 repressed 0 0.150923263629574 0 gal4-gal 987 induced -1.325 0.15067214339059 -0.199640589992532 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced 0.3 0.15066140776699 0.045198422330097 SUT1OE+ 1267 repressed -0.166413 0.150309466019417 0.0250134491686892 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.3 0.15010642270351 -0.045031926811053 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed -0.034 0.149519230769231 0.00508365384615385 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0 0.149395070948469 0 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced 0.15 0.149318521284541 0.0223977781926812 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.029 0.149079070201643 0.00432329303584765 BY4741 GAL t=90min vs. t=0 (YT00262) 998 repressed 0 0.14898571695295 0 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced -0.487 0.148731329350261 -0.0724321573935771 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced 0.075 0.148460604929052 0.0111345453696789 YFL024C 1052 induced 0.13897 0.148019510828977 0.0205702714199029 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 bimodal -0.093 0.147963498879761 -0.0137606053958178 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced 0.202 0.147956030619866 0.0298871181852129 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced -0.133 0.14754574309186 -0.0196235838312174 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0.1 0.147504667662435 0.0147504667662435 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed -0.083 0.147001493651979 0.0122011239731143 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.02 0.146893203883495 -0.0029378640776699 102. Young: Expression in taf25_2 deletion mutant(1) 208 bimodal 0 0.146882001493652 0 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed 0.3 0.146836725168036 -0.0440510175504108 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed 0.339 0.146591672890217 -0.0496945771097836 Expression in PDR1-3 mutant(1) 555 repressed 0.401 0.145492905153099 -0.0583426549663927 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed -0.06 0.14534213965646 0.0087205283793876 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.67 0.145041542195668 0.0971778332710976 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced 0.127 0.14439927184466 0.0183387075242718 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced -0.123 0.143678117998506 -0.0176724085138162 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 0.83 0.143559092606423 0.119154046863331 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced -0.04 0.143381721433906 -0.00573526885735624 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 0.01 0.142979368932039 0.00142979368932039 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.07 0.142868278566094 0.0100007794996266 293. Rosetta 2000: Expression in ubr2 deletion mutant (1) 412 repressed -0.043 0.142661967886482 0.00613446461911873 HAC1OE+ 1237 repressed 0.0814405 0.142597087378641 -0.0116131780946602 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 0.29 0.14253500746826 0.0413351521657954 YOR335C 1164 induced 0.080341 0.142353902165795 0.0114368548539021 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed 0.13 0.142130321135176 -0.0184769417475729 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced 0.43 0.142117251680358 0.0611104182225539 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.06 0.141845593726662 0.00851073562359972 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.88 0.141811986557132 0.124794548170276 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced -0.658 0.141744772218073 -0.093268060119492 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.74 0.141681292008962 0.104844156086632 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.1 0.141411967886482 -0.0141411967886482 YDL047W 1032 induced 0.1406 0.141166915608663 0.019848068334578 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced -0.25 0.14111930545183 -0.0352798263629575 wt_plus_gamma_10_min 937 induced -0.31 0.140493371919343 -0.0435529452949963 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.027 0.140151699029126 0.0037840958737864 wt_plus_gamma_5_min 936 induced 0.28 0.139988330843913 0.0391967326362956 gal3+gal 977 bimodal -0.395 0.139884708737864 -0.0552544599514563 45. Expression in snf2 mutant cells in minimal medium(1) 135 bimodal 0.316 0.139758681852128 0.0441637434652725 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0.7 0.139679331590739 0.0977755321135173 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.116 0.139297050037341 -0.0161584578043316 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 0.25 0.13884568707991 0.0347114217699775 SOK2OE+ 1261 bimodal 0.113652 0.138786874533234 0.0157734058644511 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced 1.19 0.138349047796863 0.164635366878267 166. Rosetta 2000: Expression in erp2 deletion mutant (1) 285 repressed -0.01 0.138288368185213 0.00138288368185213 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(4) 543 repressed -0.23 0.138168876026886 0.0317788414861838 YGR198W 1196 induced 0.038413 0.138116598207618 0.00530547288694923 37. Young: Expression in gcn5 mutant(1) 121 induced 0 0.137555078416729 0 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.15 0.137541075429425 0.0206311613144138 472. Expression in sap3 deletion(1) 629 induced -0.761 0.137162994772218 -0.104381039021658 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced 0.19 0.136895070948469 0.0260100634802091 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 repressed 0.075 0.136521657953697 -0.0102391243465273 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(3) 649 repressed -1.189 0.136418969380134 0.162202154592979 SFP1OE+ 1258 repressed 0.0108325 0.13600214712472 -0.00147324325872853 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.033 0.135831777445855 0.00448244865571322 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.184 0.135630134428678 -0.0249559447348768 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced 0.063 0.135604462285288 0.00854308112397314 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced 0.173 0.135429424943988 0.0234292905153099 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0 0.13542429051531 0 611. Brown enviromental changes :YPD stationary phase 2 h ypd-1(1) 802 induced -0.13 0.135199775952203 -0.0175759708737864 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 bimodal -0.516 0.135093820014937 -0.0697084111277075 YNR035C 1138 induced 0.078051 0.134982729648992 0.0105355370318335 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced -0.11 0.134982262882748 -0.0148480489171023 56. Expression in response to overproduction of Ste12p(1) 161 repressed 0.021 0.13457430918596 -0.00282606049290516 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 induced 0.34 0.134430078416729 0.0457062266616879 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced 0.053 0.134390870052278 0.00712271611277073 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed 0.04 0.134364731142644 -0.00537458924570576 gal10+gal 982 induced -0.425 0.13409213965646 -0.0569891593539955 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.134030993278566 0 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed 0.332 0.133914768483943 -0.0444597031366691 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.17 0.133910567587752 -0.0227647964899178 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.01 0.133762602688574 0.00133762602688574 YLR291C 1109 induced 0.42329 0.133506814787155 0.0565120996312548 gal2gal80-gal 994 repressed 0.13 0.133396657953697 -0.0173415655339806 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 bimodal 0.08 0.133307972367438 0.010664637789395 YMR079W 1124 induced 0.037817 0.13326502987304 0.00503968363470875 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced -0.013 0.13307925690814 -0.00173003033980582 55. Expression in response to overproduction of Ste11p(1) 160 repressed 0.083 0.132989171023152 -0.0110381011949216 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced 0.127 0.132783327109783 0.0168634825429424 YKR079C 1094 induced 0.16208 0.13265496639283 0.0215007169529499 gal3-gal 986 induced 1.063 0.132480395817774 0.140826660754294 579. Brown enviromental changes :aa starv 1 h(1) 777 induced 0.63 0.132261015683346 0.083324439880508 RFX1OE+ 1253 induced 0.018399 0.132202203136669 0.00243238833551157 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.213 0.132119118745332 0.0281413722927557 475. Expression in hos2 deletion(1) 632 induced -0.249 0.132012696041822 -0.0328711613144137 mec1_plus_gamma_90_min 954 repressed 0.215 0.131762509335325 -0.0283289395070949 612. Brown enviromental changes :YPD stationary phase 4 h ypd-1(1) 803 induced -0.26 0.131701829723674 -0.0342424757281552 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 0.59 0.13129574309186 0.0774644884241974 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.023 0.1312607356236 0.0030189969193428 gal2-gal 985 induced 0 0.131200056011949 0 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced 0.12 0.131076362957431 0.0157291635548917 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal -0.093 0.130951269604182 -0.0121784680731889 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 bimodal 0.37 0.130924663928305 0.0484421256534729 YDR141C 1042 induced 0.023323 0.130854648991785 0.0030519229784354 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 0.34 0.130774365197909 0.0444632841672891 gal1gal10+gal 993 induced 0.502 0.130435492905153 0.0654786174383868 YPR169W 1178 induced 0.2226 0.130429891710232 0.0290336938946976 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced 0.18 0.130420556385362 0.0234757001493652 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.02 0.130353342046303 0.00260706684092606 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced 0.66 0.130322535474235 0.0860128734129951 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0 0.130283793876027 0 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 1.25 0.130269324122479 0.162836655153099 YBR029C 1182 induced 0.098163 0.130244585511576 0.0127851992475728 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 induced -0.12 0.130156833457804 -0.0156188200149365 35. Young: Expression in tfa1 mutant(1) 119 repressed 0 0.130079817027633 0 YLR163C 1105 induced 0.10218 0.129906646751307 0.0132738611650486 YHP1OE+ 1273 induced 0.0157985 0.129868371919343 0.00205172547376774 194. Rosetta 2000: Expression in imp2 (**12) deletion mutant (1) 313 bimodal 0.02 0.129807225541449 0.00259614451082898 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced -0.32 0.129793222554145 -0.0415338312173264 YLR378C 1113 induced 0.18434 0.129691000746826 0.0239072390776699 YBL020W 1013 induced 0.24769 0.129683999253174 0.0321214297750187 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.86 0.129642457057506 0.111492513069455 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 induced 0.52 0.129520164301718 0.0673504854368934 mec1_plus_gamma_30_min 951 repressed 0.57 0.129461351755041 -0.0737929705003734 121. Rosetta 2000: Expression in ase1 (**12) deletion mutant (1) 240 repressed -0.299 0.12942354368932 0.0386976395631067 6. Expression during the cell cycle (cdc15 arrest and release)(1) 24 repressed -0.31 0.12932645631068 0.0400912014563108 474. Expression in hda1 deletion(1) 631 induced -0.271 0.129247106049291 -0.0350259657393579 UPC2OE+ 1270 induced 0.052012 0.12883355115758 0.00670089066280805 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.14 0.128827016430172 -0.0180357823002241 SWI4OE+ 1268 induced -0.014756 0.128705657206871 -0.00189918067774459 YOX1OE+ 1274 induced 0.020315 0.127976101568335 0.00259983450336073 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -1.043 0.127825802837939 0.13332231235997 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced 0.05 0.127695575056012 0.0063847787528006 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 0.005 0.127666168782674 0.00063833084391337 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0.44 0.127614824495892 0.0561505227781925 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.046 0.127313760268857 0.00585643297236742 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.36 0.127229742345034 0.0458027072442122 YJL194W 1084 induced 0.29851 0.1271928678118 0.0379683429705004 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed 0.04 0.127015496639283 -0.00508061986557132 YJL081C 1082 induced -0.022426 0.126817587752054 -0.00284401122292756 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 bimodal 0.123 0.126505787901419 0.0155602119118745 YNL158W 1133 induced 0.28086 0.126195855115758 0.0354433678678118 YNL272C 1136 induced 0.11554 0.126145911127707 0.0145748985716953 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced 0.03 0.126127240477969 0.00378381721433907 sfp1D GLU vs. BY4741 GLU (YT00238) 999 repressed 0 0.126091766243465 0 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced 1.14 0.126030153099328 0.143674374533234 YHR118C 1069 induced 0.019405 0.126018483943241 0.00244538868091859 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.02 0.125968073188947 -0.00251936146377894 mec1_plus_gamma_10_min 949 induced 0.481 0.125948002240478 0.0605809890776699 182. Rosetta 2000: Expression in hat2 deletion mutant (1) 301 induced 0.057 0.1257893017177 0.0071699901979089 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -1.537 0.125572255414488 -0.193004556572068 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.163 0.125273525018671 0.0204195845780434 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0.04 0.125145631067961 0.00500582524271844 YLR101C 1103 induced 0.093833 0.125127427184466 0.011741081875 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 0.83 0.125054611650485 0.103795327669903 39. Young: Expression in sir2 deletion mutant(1) 129 induced 0 0.124985063480209 0 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed 0 0.12496499253174 0 34. Young: Expression in taf17 mutant(1) 118 bimodal 0 0.12461071695295 0 637. Brown enviromental changes :galactose car-1(1) 828 induced 0.04 0.124474887976102 0.00497899551904408 537. Brown enviromental changes :1 mM Menadione (50 min)redo(1) 735 induced -0.18 0.124375933532487 -0.0223876680358477 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 1.06 0.12432645631068 0.131786043689321 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0.677 0.124258775205377 0.0841231908140402 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed 0.623 0.123731329350261 -0.0770846181852126 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 bimodal 0.382 0.123651512322629 0.0472348777072443 YPL010W 1166 induced 0.3403 0.123287434652726 0.0419547140123227 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.22 0.123174010455564 -0.0270982823002241 401. Rosetta 2000: Expression in response to HU(1) 520 induced -0.057 0.123141336818521 -0.0070190561986557 95. Expression in response to 50ug/mL FK506(1) 201 induced -0.029 0.123140403286034 -0.00357107169529499 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(4) 646 repressed -1.076 0.123105395817774 0.132461405899925 73. Expression in response to overproduction of activated Pkc1p(1) 178 bimodal 0.147 0.123077389843167 0.0180923763069455 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced 1.073 0.122955563853622 0.131931320014936 YDR489W 1047 induced 0.025769 0.122941094100075 0.00316806905386483 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced 0 0.122860343539955 0 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced -0.16 0.122854742345034 -0.0196567587752054 YLR459W 1117 induced 0.25094 0.122837938760269 0.0308249523525019 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 0.083 0.122827203136669 0.0101946578603435 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced 0 0.122778192681105 0 YLR229C 1211 induced 0.10081 0.12271284540702 0.0123706819454817 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed -0.07 0.122687640029873 0.00858813480209111 130. Rosetta 2000: Expression in cat8 deletion mutant (1) 249 induced 0.013 0.122675970873786 0.00159478762135922 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced -0.073 0.122671769977595 -0.00895503920836443 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced -0.12 0.122506534727409 -0.0147007841672891 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced 0.1 0.122329163554892 0.0122329163554892 342. Rosetta 2000: Expression in yil037c (haploid) deletion mutant (1) 461 induced -0.1 0.122249813293503 -0.0122249813293503 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.234 0.122078976848394 -0.0285664805825242 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced 0.87 0.122003827483196 0.106143329910381 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.124 0.121795182972367 0.0151026026885735 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced -0.22 0.121736370425691 -0.026782001493652 8. Expression during the cell cycle (cell size selection and release)(9) 73 induced 0.2 0.121452576549664 0.0242905153099328 54. Expression in response to overproduction of Ste5p(1) 159 repressed 0.079 0.12145210978342 -0.00959471667289018 YPL243W 1174 induced 0.15018 0.121332617625093 0.0182217325149365 88. Expression in response to DNA damage by MMS(1) 194 repressed 0 0.121326549663928 0 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.37 0.12126213592233 0.0448669902912621 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 1.33 0.121196321882002 0.161191108103063 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced 0.027 0.121015216579537 0.0032674108476475 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(2) 635 induced 0.072 0.120793969380134 0.00869716579536965 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.01 0.120728155339806 -0.00120728155339806 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced -0.076 0.120703883495146 -0.0091734951456311 YDL055C 1033 induced 0.14415 0.120622199402539 0.017387690043876 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced -0.296 0.120272591486184 -0.0356006870799105 MIG1OE+ 1246 induced 0.030361 0.12027212471994 0.0036515819786221 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed -0.08 0.119967326362957 0.00959738610903656 359. Rosetta 2000: Expression in ymr034c deletion mutant (1) 478 repressed -0.063 0.119863237490665 0.0075513839619119 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 bimodal -0.5 0.119455750560119 -0.0597278752800595 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced -0.111 0.119440347274085 -0.0132578785474234 YHR188C 1070 induced 0.09995 0.119381067961165 0.0119321377427184 YLR457C 1116 induced -0.020393 0.119378734129948 -0.00243449052511203 YLR440C 1115 induced 0.26249 0.119283513816281 0.0313107295416356 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(3) 215 induced 0 0.11924570575056 0 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced -0.36 0.119051530993279 -0.0428585511575804 BY4741 GAL t=30min vs. t=0 (YT00261) 996 repressed 0 0.119030526512323 0 dun1- + 0.02% MMS - 120 min 935 repressed 0.069 0.118983383121733 -0.00820985343539958 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced 0.33 0.11893857356236 0.0392497292755788 YFL005W 1051 induced 0.15224 0.118804611650485 0.0180868140776698 YOR077W 1220 induced 0.022716 0.118790141896938 0.00269843686333084 YLR086W 1102 induced 0.029138 0.118789675130695 0.00346129355395819 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 repressed 0.023 0.118399458551158 -0.00272318754667663 TOS8OE+ 1269 induced 0.0649525 0.118394324122479 0.00769000733756532 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0 0.118342979835698 0 YNL150W 1132 induced 0.053845 0.118298170276326 0.00636976497852877 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced -0.073 0.118092326362957 -0.00862073982449586 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 induced -0.189 0.118088125466766 -0.0223186557132188 gal4+gal 978 induced 0 0.118050784167289 0 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced 0.488 0.117751120238984 0.0574625466766242 YPR180W 1180 induced 0.010833 0.117749719940254 0.00127558271611277 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(4) 637 induced -0.41 0.117715179238237 -0.0482632234876772 WT/sok2+ 1312 induced 0.0137775 0.117714245705751 0.00162180802021098 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0 0.11767643764003 0 gal5-gal 988 induced 0.279 0.117637696041822 0.0328209171956683 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 1.97 0.117404779686333 0.231287415982076 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(1) 213 induced 0 0.117396844660194 0 17. parental strain versus evolved strain 2(1) 101 induced -0.38 0.117375840179238 -0.0446028192681104 32. Young: Expression in swi2 mutant(1) 116 bimodal 0.309 0.11737070575056 0.036267548076923 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed 0.13 0.11727501867065 -0.0152457524271845 104. Young: Expression in taf61 deletion mutant(1) 210 induced 0 0.117232076176251 0 58. Expression in rst1 rst2 double deletion mutant cells(1) 163 repressed 0.023 0.117221807318895 -0.00269610156833458 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed 0.782 0.116963218820015 -0.0914652371172517 47. Expression in swi1 mutant cells in minimal medium(1) 137 bimodal 0.286 0.116912808065721 0.0334370631067962 242. Rosetta 2000: Expression in rpl12a deletion mutant (1) 361 repressed -0.296 0.116826923076923 0.0345807692307692 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced -1.029 0.116796116504854 -0.120183203883495 YPL231W 1173 induced 0.15599 0.116740104555639 0.0182102889096341 sfp1::GALSFP1 t=0 RAFF vs. BY4741 t=0 RAF (YT00293) 1000 repressed 0 0.116635548917102 0 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 repressed -0.126 0.116619678864824 0.0146940795369678 142. Rosetta 2000: Expression in cue1 deletion mutant (1) 261 induced 0.036 0.116551997759522 0.00419587191934279 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.086 0.116524925317401 0.0100211435772965 YBR143C 1020 induced 0.19357 0.116505321135176 0.022551935012136 305. Rosetta 2000: Expression in yar014c deletion mutant (1) 424 repressed -0.007 0.116428771471247 0.000815001400298729 DES459 (mec1-) + 0.02% MMS - 15 min 927 repressed -0.27 0.116405433159074 0.03142946695295 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(7) 546 induced 0.03 0.116391896938013 0.00349175690814039 YJL091C 1083 induced 0.19074 0.116359690067214 0.0221944472834204 647. Brown enviromental changes :YP raffinose vs reference pool car-2(1) 838 induced -0.18 0.11633215085885 -0.020939787154593 481. Expression in response to heat shock: 15,30,45,60,120 min(4) 655 repressed 0 0.116188853622106 0 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced -0.035 0.116103902165795 -0.00406363657580283 YGL122C 1192 induced 0.13115 0.115991878267364 0.0152123348347648 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced 1.63 0.11591859596714 0.188947311426438 14. Galactose-induced expression in med2-deleted cells(1) 98 repressed -0.31 0.115866784914115 0.0359187033233756 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 1.21 0.115843446601942 0.14017057038835 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced 0.33 0.115744025392084 0.0381955283793877 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 bimodal -0.13 0.115735623599701 -0.0150456310679611 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced 0 0.115610997012696 0 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.09 0.11556572068708 0.0104009148618372 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.07 0.115477035100822 0.00808339245705754 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.115356609410007 0 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed -0.262 0.115352408513816 0.0302223310306198 309. Rosetta 2000: Expression in yel008w deletion mutant (1) 428 repressed 0.04 0.114911781179985 -0.0045964712471994 15. evolved strain 1 versus evolved strain 1(1) 99 repressed -0.1 0.114908047050037 0.0114908047050037 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 0 0.11489217699776 0 YDR047W 1039 induced 0.17974 0.114742345033607 0.0206237890963405 YOR232W 1157 induced 0.16621 0.114655059746079 0.0190568174803958 101. Young: Expression in spt3 deletion mutant(1) 207 repressed 0 0.114587378640777 0 468. Expression in sin33 deletion(1) 625 repressed -0.038 0.114511762509335 0.00435144697535473 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced 0.103 0.114441747572816 0.0117875 gal1-gal 984 induced -0.538 0.114440814040329 -0.061569157953697 YKR086W 1095 induced -0.30394 0.114434746079164 -0.0347812967233011 105. Young: Expression in taf90 deletion mutant(1) 211 bimodal 0 0.114274178491412 0 YDL132W 1037 induced -0.046064 0.11426717699776 -0.00526360324122482 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced -0.07 0.114206964152353 -0.00799448749066471 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced 0.223 0.114199495892457 0.0254664875840179 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 induced 0.29 0.114107076176251 0.0330910520911128 YGL073W 1191 induced 0.0052783 0.114096807318895 0.000602237178071323 gal1+gal 975 repressed -1.026 0.114049197162061 0.117014476288275 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced 0.198 0.114014656460045 0.0225749019790889 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 induced -0.06 0.113931572068708 -0.00683589432412248 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced -0.34 0.113929238237491 -0.0387359410007469 267. Rosetta 2000: Expression in sir3 deletion mutant (1) 386 induced -0.017 0.113836818521285 -0.00193522591486185 YBR088C 1018 induced 0.013315 0.113766336818521 0.00151479877473861 108. Rosetta 2000: Expression in ade1 deletion mutant (1) 227 repressed 0.103 0.113731796116505 -0.011714375 524. Brown enviromental changes :constant 0.32 mM H2O2 (20 min) redo(1) 722 induced 0.95 0.113641243465273 0.107959181292009 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed -0.28 0.113533420463032 0.031789357729649 mec1_plus_gamma_20_min 950 repressed 0 0.113511482449589 0 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(1) 647 induced -1.001 0.113403192681105 -0.113516595873786 198. Rosetta 2000: Expression in jnm1 deletion mutant (1) 317 induced -0.16 0.11339572442121 -0.0181433159073936 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(8) 145 repressed 0.031 0.113358383121733 -0.00351410987677372 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 repressed 0.013 0.113286034353996 -0.00147271844660195 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 bimodal 0 0.113246359223301 0 HAP4OE+ 1238 repressed -0.023409 0.113035380881255 0.0026460452310493 YML031W 1118 induced 0.16439 0.112924757281553 0.0185637008495145 201. Rosetta 2000: Expression in kre1 deletion mutant (1) 320 induced 0.196 0.112799197162061 0.022108642643764 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 repressed -0.04 0.112799197162061 0.00451196788648244 YLR359W 1112 induced 0.25163 0.112754854368932 0.0283725040048544 YMR001C 1121 induced 0.15162 0.112733849887976 0.0170927063200149 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced 0.244 0.11259288648245 0.0274726643017178 YBR196C 1024 induced 0.13303 0.112574215832711 0.0149757479322255 MGA1OE+ 1245 induced 0.0415915 0.112492531740105 0.00467873313386858 YAL038W 1010 induced -0.13806 0.112401979088872 -0.0155182172330097 YFR037C 1190 induced 0.088996 0.112380974607916 0.0100014572162061 628. Brown enviromental changes :DBY7286 + 0.3 mM H2O2 (20 min)(1) 819 induced 1.02 0.112364637789395 0.114611930545183 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.49 0.112347367438387 0.0550502100448096 66. Expression in ste5 deletion mutant cells(1) 171 induced 0.054 0.112255414488424 0.0060617923823749 281. Rosetta 2000: Expression in ste5 (haploid) deletion mutant (1) 400 induced 0.179 0.112255414488424 0.0200937191934279 668. Expression in Rho0 containing rtg2 deletion vs Rho0(1) 856 induced 0 0.11210931665422 0 YMR043W 1122 induced 0.24543 0.111988890963406 0.0274854335091487 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 0.369 0.111938013442868 0.0413051269604183 191. Rosetta 2000: Expression in hpt1 deletion mutant (1) 310 induced 0.06 0.111934746079164 0.00671608476474984 ROX1OE+ 1256 induced 0.1364325 0.111924477221807 0.0152701362385642 DES460 + 0.02% MMS - 5 min 966 induced 0.015 0.1118857356236 0.001678286034354 256. Rosetta 2000: Expression in sap18 deletion mutant (1) 375 induced 0.083 0.111786314413742 0.00927826409634059 MOT3OE+ 1247 induced 0.028623 0.111736370425691 0.00319823013069455 gal80-gal 992 repressed 0 0.111626213592233 0 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 bimodal 0 0.111582804331591 0 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 induced 0 0.11150998879761 0 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.11148571695295 0 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.14 0.111446041822255 0.0156024458551157 gal4gal80-gal 995 repressed 0.066 0.111427371172517 -0.00735420649738612 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 0.56 0.111304144884242 0.0623303211351755 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed -0.12 0.111253267363704 0.0133503920836445 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 bimodal 0 0.111088032113518 0 136. Rosetta 2000: Expression in cla4 (haploid) deletion mutant (1) 255 induced -0.07 0.111052091112771 -0.00777364637789397 WT/cst6+ 1282 induced -0.228879 0.110994212098581 -0.0254042442709111 8. Expression during the cell cycle (cell size selection and release)(8) 72 induced -0.07 0.110978342046303 -0.00776848394324121 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced -0.08 0.110628734129948 -0.00885029873039584 YNR043W 1139 induced 0.055751 0.110523711725168 0.00616180745238984 681. Expression in response to 0.4M NaCl for 10 min in wild type(1) 869 induced 1 0.110407953696789 0.110407953696789 676. Expression in gcr1 mutant YPGL versus GCR1 YPGL(1) 864 bimodal 0.227 0.110313200149365 0.0250410964339059 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.25 0.110306665421957 0.0275766663554892 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced 0.23 0.110283327109783 0.0253651652352501 DES460 (wt) - mock irradiation - 5 min 944 induced 0.703 0.11018857356236 0.0774625672143391 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced 0.043 0.110175970873786 0.0047375667475728 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced -0.096 0.110174103808813 -0.010576713965646 378. Rosetta 2000: Expression in yor021c deletion mutant (1) 497 induced 0.007 0.11002427184466 0.00077016990291262 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced 0 0.109881908140403 0 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed -0.05 0.109816560866318 0.0054908280433159 213. Rosetta 2000: Expression in nrf1 deletion mutant (1) 332 induced -0.063 0.109796489917849 -0.00691717886482449 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 induced -0.71 0.109774085138163 -0.0779396004480957 341. Rosetta 2000: Expression in yhr039c deletion mutant (1) 460 induced 0.06 0.109751680358476 0.00658510082150856 270. Rosetta 2000: Expression in spf1 deletion mutant (1) 389 induced 0.007 0.10966999626587 0.00076768997386109 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0.06 0.109665795369679 0.00657994772218074 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced -1.002 0.109589245705751 -0.109808424197163 MBP1OE+ 1242 induced -0.02952 0.109452949962659 -0.00323105108289769 gal7-gal 990 bimodal 0.017 0.109296116504854 0.00185803398058252 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.013 0.109257374906647 0.00142034587378641 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.043 0.109257374906647 0.00469806712098582 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(3) 155 repressed -0.036 0.109228435399552 0.00393222367438387 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(1) 634 induced 0.078 0.10918782673637 0.00851665048543686 YDR412W 1186 induced 0.11799 0.109148618371919 0.0128784454817027 470. Expression in hda1 deletion(1) 627 induced 0.158 0.108945108289768 0.0172133271097833 7. Expression during the cell Cycle (cdc28)(2) 49 repressed -0.37 0.108914768483943 0.0402984643390589 mec1_plus_gamma_5_min 948 induced 0.13 0.10877427184466 0.0141406553398058 YCR042C 1029 induced -0.023515 0.108718726661688 -0.00255652085744959 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced 1.118 0.108687453323376 0.121512572815534 YGR048W 1057 induced 0.16068 0.108623973114264 0.0174536999999999 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(5) 217 induced 0 0.108393857356236 0 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 bimodal 0.013 0.107986837191934 0.00140382888349514 YDR062W 1040 induced -0.09278 0.107894417475728 -0.010010444053398 131. Rosetta 2000: Expression in cbp2 deletion mutant (1) 250 induced 0.06 0.107851474981329 0.00647108849887974 358. Rosetta 2000: Expression in ymr031w-a deletion mutant (1) 477 repressed -0.103 0.107690440627334 0.0110921153846154 5. Expression during the cell cycle (alpha factor arrest and release)(13) 18 repressed -0.29 0.107660100821509 0.0312214292382376 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 repressed 0.123 0.107506534727409 -0.0132233037714713 dun1- + 0.02% MMS - 90 min 934 repressed -0.074 0.107350634802091 0.00794394697535473 641. Brown enviromental changes :sucrose car-1(1) 832 repressed -0.1 0.107325896191187 0.0107325896191187 13. Expression in cells overexpressing Yap1p(1) 97 induced -0.089 0.107296023151606 -0.00954934606049293 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(3) 124 induced 0 0.107235810306199 0 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced -0.269 0.107228342046303 -0.0288444240104555 46. Expression in swi1 mutant cells in YPD(1) 136 bimodal 0.39 0.107197535474235 0.0418070388349516 172. Rosetta 2000: Expression in fus2 deletion mutant (1) 291 induced -0.073 0.107168129200896 -0.00782327343166541 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 repressed 0.52 0.107116318147872 -0.0557004854368934 CAT8OE+ 1226 repressed -0.0294795 0.107113050784167 0.00315763918059185 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced -0.17 0.107039768483943 -0.0181967606422703 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed -0.063 0.107035100821509 0.00674321135175507 322. Rosetta 2000: Expression in yer034w deletion mutant (1) 441 induced -0.05 0.106961351755041 -0.00534806758775205 465. Expression in rpd3 deletion(1) 622 induced 0.127 0.106925877520538 0.0135795864451083 Addition of 1M NaCl (10) 915 induced 1.55 0.106882001493652 0.165667102315161 128. Rosetta 2000: Expression in bub3 (haploid **2) deletion mutant (1) 247 induced 0.571 0.106645351008215 0.0608944954256908 682. Expression in response to 0.4M NaCl for 10 min in hog1 mutant(1) 870 induced 1.202 0.106538461538462 0.128059230769231 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 repressed -0.19 0.10639002987304 0.0202141056758776 337. Rosetta 2000: Expression in yhr011w (**14) deletion mutant (1) 456 repressed 0.279 0.106306011949216 -0.0296593773338313 YPL075W 1221 induced 0.039394 0.106279406273338 0.00418677093073188 395. Rosetta 2000: Expression in response to 2-deoxy-D-glucose(1) 514 induced -0.375 0.106248132935026 -0.0398430498506347 gal6-gal 989 induced -0.382 0.106236930545183 -0.0405825074682599 221. Rosetta 2000: Expression in pet111 deletion mutant (1) 340 induced 0.106 0.106176717699776 0.0112547320761763 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 2.038 0.106055358476475 0.216140820575056 8. Expression during the cell cycle (cell size selection and release)(7) 71 repressed -0.01 0.106007748319642 0.00106007748319642 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced 0.2 0.105903192681105 0.021180638536221 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 0.879 0.105900858849888 0.0930868549290515 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 bimodal -0.193 0.105893390589993 -0.0204374243838687 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced 0.44 0.105892923823749 0.0465928864824496 218. Rosetta 2000: Expression in pch1 deletion mutant (1) 337 repressed -0.01 0.105744492158327 0.00105744492158327 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced -0.737 0.105724887976102 -0.0779192424383872 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 induced 0.848 0.105708084391337 0.0896404555638538 471. Expression in sin3 deletion(1) 628 induced 0.931 0.105674477221807 0.0983829382935023 308. Rosetta 2000: Expression in yel001c deletion mutant (1) 427 repressed 0.05 0.105545649738611 -0.00527728248693055 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced 0 0.105452296489918 0 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(4) 82 repressed -1.245 0.105358476474981 0.131171303211351 451. Expression in response to BCNU (200 micromolar) for 60 min(1) 608 induced 0 0.105316000746826 0 wt_plus_gamma_30_min 939 repressed -0.16 0.105292662434653 0.0168468259895445 trp- 2% Glucose-Average wt vs fus3 (+Fus3T180A,Y182F) 893 repressed 0.28 0.105229182225541 -0.0294641710231515 481. Expression in response to heat shock: 15,30,45,60,120 min(5) 656 repressed 0.144 0.105171303211352 -0.0151446676624347 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced -0.086 0.105159634055265 -0.00904372852875279 483. Expression in response to alkali: 10,20,40,60,80,100 min(3) 665 induced 0.122 0.10513069454817 0.0128259447348767 238. Rosetta 2000: Expression in rml2 (**13) deletion mutant (1) 357 induced 0.083 0.105126960418223 0.00872553771471251 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.186 0.105058345780433 0.0195408523151605 638. Brown enviromental changes :glucose car-1(1) 829 repressed -0.34 0.105051811053025 0.0357176157580285 346. Rosetta 2000: Expression in yml005w deletion mutant (1) 465 induced 0.01 0.104969660194175 0.00104969660194175 168. Rosetta 2000: Expression in far1 (haploid) deletion mutant (1) 287 induced 0.16 0.104869772218073 0.0167791635548917 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(12) 538 induced -0.12 0.104796956684093 -0.0125756348020912 204. Rosetta 2000: Expression in mad2 deletion mutant (1) 323 induced -0.12 0.104755881254668 -0.0125707057505602 YBR243C 1026 induced 0.17471 0.104748879761016 0.0183006767830471 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal 0.149 0.104693334578043 0.0155993068521284 YNL182C 1134 induced 0.37627 0.10466999626587 0.0393841794949589 YER006W 1188 induced 0.24501 0.104629387602689 0.0256352462565348 482. Expression in response to acid: 10,20,40,60,80,100 min(6) 662 induced 0 0.104583177744586 0 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed -0.103 0.104508495145631 0.010764375 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 repressed -0.332 0.104409073935773 0.0346638125466766 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.57 0.104332991038088 0.0594698048917102 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed -0.518 0.104308719193428 0.0540319165421957 646. Brown enviromental changes :YP mannose vs reference pool car-2(1) 837 repressed 0.59 0.104241971620612 -0.0615027632561611 147. Rosetta 2000: Expression in dig1 deletion mutant (1) 266 repressed -0.242 0.104239637789395 0.0252259923450336 PHO81c vs WT exp1(1) 583 induced 0.189 0.104141616878267 0.0196827655899925 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed -0.045 0.104094006721434 0.00468423030246453 wt_plus_gamma_60_min 941 repressed -0.05 0.103919902912621 0.00519599514563105 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 induced -0.026 0.103908233756535 -0.00270161407766991 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced -0.14 0.103732729648992 -0.0145225821508589 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed 0.057 0.103724794622853 -0.00591231329350262 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(5) 651 repressed 1.218 0.103664581777446 -0.126263460604929 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced -0.09 0.103633775205377 -0.00932703976848393 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced 0.213 0.103444734876774 0.0220337285287529 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 induced -0.05 0.103354648991785 -0.00516773244958925 150. Rosetta 2000: Expression in dig2 deletion mutant (1) 269 induced -0.013 0.10321928678118 -0.00134185072815534 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(4) 149 repressed 0.014 0.103205283793876 -0.00144487397311426 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0 0.103173076923077 0 XBP1OE+ 1271 induced 0.1837455 0.103159073935773 0.0189550156198656 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.096 0.103086258401792 0.00989628080657203 462. Expression in response to 0.05% MMS for 60 min(1) 619 repressed 0 0.103042382374907 0 445. Expression in response to 0.1% MMS for 60 min (average of 3 experiments)(1) 602 repressed 0 0.102955097087379 0 96. Heat-shock induced expression in med2 deleted cells(1) 202 repressed 0.304 0.102903286034354 -0.0312825989544436 YOR204W 1155 induced 0.25579 0.102884148618372 0.0263167363750934 26. Fink: Expression in diploid high copy TEC1(1) 110 repressed 0 0.10273571695295 0 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced 0.176 0.102666168782674 0.0180692457057506 YGL116W 1055 induced -0.059482 0.102554611650485 -0.00610015341019415 CUP2OE+ 1229 repressed 0.181117 0.102532206870799 -0.0185703257118185 DES460 + 0.02% MMS - 90 min 924 induced 0 0.102422516803585 0 189. Rosetta 2000: Expression in hog1 (haploid) deletion mutant (1) 308 induced -0.322 0.102419716206124 -0.0329791486183719 639. Brown enviromental changes :mannose car-1(1) 830 repressed -0.42 0.102397311426438 0.043006870799104 YPL228W 1172 induced 0.042247 0.102346900672143 0.00432384951269603 362. Rosetta 2000: Expression in ymr044w deletion mutant (1) 481 repressed -0.13 0.102338498879761 0.0133040048543689 506. Brown enviromental changes :37C to 25C shock - 60 min(1) 704 induced -0.54 0.102308159073936 -0.0552464058999254 YPR178W 1179 induced 0.2406 0.102241878267364 0.0245993959111278 YKL033W 1204 induced 0.15489 0.102221807318895 0.0158331357356236 292. Rosetta 2000: Expression in ubr1 deletion mutant (1) 411 induced -0.04 0.102220407020164 -0.00408881628080656 Addition of 1M NaCl (30) 916 induced -1.59 0.102140123226288 -0.162402795929798 291. Rosetta 2000: Expression in ubp8 deletion mutant (1) 410 induced -0.269 0.102054705003734 -0.0274527156460044 YNL149C 1213 induced -0.010081 0.102032766990291 -0.00102859232402912 94. Expression in response to 1ug/mL FK506(1) 200 induced -0.318 0.102030433159074 -0.0324456777445855 YHR205W 1201 induced 0.094176 0.101699029126214 0.00957760776699033 63. Expression in response to alpha-factor in fus3 loss-of-function mutant cells(1) 168 induced -0.038 0.10162854742345 -0.0038618848020911 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced -0.004 0.101527259148618 -0.000406109036594472 473. Expression in ume6 deletion(1) 630 induced -0.64 0.101506721433906 -0.0649643017176998 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed -0.4 0.101497386109037 0.0405989544436148 sfp1::GALSFP1 t=90min GAL vs. t=0 RAFF (YT00266) 1007 induced -0.07 0.101314413741598 -0.00709200896191186 YML046W 1119 induced 0.14194 0.101228061986557 0.0143683111183719 181. Rosetta 2000: Expression in gyp1 deletion mutant (1) 300 induced -0.093 0.101182318894698 -0.00940995565720692 Meiosis in SK1 a alpha cells: 1h,2h,3h,4h,6h,8h,10h(5) 561 repressed 0 0.10110856982823 0 345. Rosetta 2000: Expression in yml003w deletion mutant (1) 464 repressed -0.076 0.101006348020911 0.00767648244958924 277. Rosetta 2000: Expression in ste2 (haploid) deletion mutant (1) 396 induced -0.033 0.100999346527259 -0.00333297843539955 YOR169C 1154 induced 0.30364 0.100969006721434 0.0306582292008962 481. Expression in response to heat shock: 15,30,45,60,120 min(3) 654 repressed 0.437 0.100952669902913 -0.044116316747573 wt_plus_gamma_20_min 938 induced -0.05 0.100941934279313 -0.00504709671396565 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed -0.032 0.100926064227035 0.00322963405526512 BYE1OE+ 1225 induced -0.0029395 0.100847180731889 -0.000296440287761388 YER172C 1050 induced 0.22193 0.10077716579537 0.0223654764049665 YNL245C 1215 induced 0.31139 0.100745892457058 0.0313712634522033 wt+gal 974 repressed -0.226 0.100713218820015 0.0227611874533234 23. Fink: Expression in diploid tec1/tec1 deletion mutant(1) 107 repressed 0 0.100712285287528 0 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed -0.38 0.100682412247946 0.0382593166542195 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced 0.3 0.100593726661688 0.0301781179985064 YNL221C 1135 induced 0.14888 0.100526979088872 0.0149664566467513 HSF1OE+ 1240 repressed 0.1044985 0.100339805825243 -0.0104853591990292 pho80 vs WT(1) 581 induced -0.358 0.100260455563854 -0.0358932430918597 65. Expression in ste4 deletion mutant cells(1) 170 induced 0.024 0.100208177744586 0.00240499626587006 280. Rosetta 2000: Expression in ste4 (haploid) deletion mutant (1) 399 induced 0.08 0.100208177744586 0.00801665421956688 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 0.19 0.100194641523525 0.0190369818894697 WT/rox1+ 1307 induced -0.0233165 0.100179238237491 -0.00233582920836446 501. Brown enviromental changes :Heat Shock 030inutes hs-2(1) 699 induced 0.19 0.100147498132935 0.0190280246452577 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed -0.292 0.100105489171023 0.0292308028379387 516. Brown enviromental changes :33C vs. 30C - 90 minutes(1) 714 induced -0.27 0.100098954443615 -0.0270267176997761 304. Rosetta 2000: Expression in yap7 deletion mutant (1) 423 induced 0.04 0.100056945481703 0.00400227781926812 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced 0.56 0.100004667662435 0.0560026138909636 129. Rosetta 2000: Expression in bul1 deletion mutant (1) 248 induced -0.05 0.0999906646751307 -0.00499953323375654 572. Brown enviromental changes :Hypo-osmotic shock - 5 min(1) 770 induced 0.1 0.0999733943241225 0.00999733943241225 461. Expression of rpn4 deletion in response to 0.1% MMS for 60 min(1) 618 repressed -0.029 0.0999122479462285 0.00289745519044063 534. Brown enviromental changes :1 mM Menadione (20 min) redo(1) 732 induced 0.15 0.0998483009708738 0.0149772451456311 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced 1.087 0.0997773525018671 0.10845798216953 79. Expression in fus3 deletion mutant cells(1) 185 induced 0.083 0.0997610156833458 0.0082801643017177 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced 0.276 0.0997610156833458 0.0275340403286034 MHY1 (dun1) + heat 20 min 962 induced 0.05 0.0997269417475728 0.00498634708737864 WT/rgm1+ 1305 repressed NaN 0.0997264749813293 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(11) 550 induced -0.23 0.0996938013442868 -0.022929574309186 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced 0.116 0.0996335884988798 0.0115574962658701 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.11 0.0995850448095594 0.0109543549290515 77. Expression in tec1 deletion mutant cells(1) 183 induced 0.042 0.0995785100821509 0.00418229742345034 YLL003W 1096 induced 0.17881 0.0995640403286034 0.0178030460511576 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced 0.73 0.0995519044062733 0.0726728902165795 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(1) 643 induced -1.23 0.0995313666915609 -0.12242358103062 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(4) 650 repressed -1.558 0.0994912247946229 0.155007328230022 330. Rosetta 2000: Expression in yer084w deletion mutant (1) 449 induced -0.013 0.0994137415982076 -0.0012923786407767 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 0.339 0.0993073188946975 0.0336651811053025 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(2) 182 repressed 0.025 0.0992247012696042 -0.00248061753174011 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 repressed -0.083 0.099106142643764 0.00822580983943241 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed 0.12 0.0990165235250187 -0.0118819828230022 119. Rosetta 2000: Expression in arg5,6 deletion mutant (1) 238 repressed -0.306 0.0987056572068708 0.0302039311053025 449. Expression in response to 0.1% MMS for 60 min(1) 606 repressed 0.057 0.0987051904406273 -0.00562619585511576 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(6) 84 repressed -0.098 0.0986692494398805 0.00966958644510829 mec1_plus_gamma_120_min 955 repressed 0.49 0.0986393764002987 -0.0483332944361464 685. Expression in response to 0.8M NaCl for 20 min in wild type(1) 873 induced -0.152 0.0986333084391337 -0.0149922628827483 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed -0.22 0.0984923450336072 0.0216683159073936 YOR261C 1160 induced 0.097644 0.0983476474981329 0.00960305769230769 DES460 + 0.02% MMS - 5 min 919 induced -0.1 0.0982986370425691 -0.00982986370425691 370. Rosetta 2000: Expression in ymr258c deletion mutant (1) 489 induced -0.007 0.0982435586258402 -0.000687704910380881 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 bimodal -0.113 0.0982239544436146 -0.0110993068521285 WT/gis1+ 1288 induced 0.0442165 0.0982080843913368 0.00434241776348954 347. Rosetta 2000: Expression in yml011c deletion mutant (1) 466 induced 0.013 0.098138069454817 0.00127579490291262 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 bimodal 0.102 0.0981315347274085 0.0100094165421957 158. Rosetta 2000: Expression in ecm34 deletion mutant (1) 277 induced 0.013 0.0981035287528006 0.00127534587378641 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 repressed -0.13 0.0979079536967886 0.0127280339805825 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 repressed 0 0.0977977968633308 0 YBL084C 1015 induced 0.2051 0.0977455190440627 0.0200476059559373 170. Rosetta 2000: Expression in fpr1 deletion mutant (1) 289 induced -0.073 0.097734783420463 -0.0071346391896938 266. Rosetta 2000: Expression in sir2 deletion mutant (1) 385 induced -0.057 0.0976722367438387 -0.00556731749439881 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(6) 151 induced 0.008 0.0976493651979089 0.000781194921583271 YBL040C 1014 induced 0.15311 0.0976311613144137 0.0149483071088499 16. parental strain versus evolved strain 1(1) 100 repressed -0.01 0.0975840179238237 0.000975840179238237 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.186 0.097540141896938 -0.0181424663928305 164. Rosetta 2000: Expression in erg5 deletion mutant (1) 283 repressed -0.143 0.0975196041822255 0.0139453033980582 YRR1OE+ 1276 induced -0.0759365 0.0974304518297237 -0.00739852750536781 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed -0.18 0.0973282300224048 0.0175190814040329 YLR147C 1210 induced 0.22249 0.0972848207617625 0.0216448997712845 6. Expression during the cell cycle (cdc15 arrest and release)(5) 28 induced 0 0.0972717513069455 0 YNL258C 1216 induced 0.19731 0.0970220313666916 0.0191434170089619 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 induced 0.066 0.0970168969380134 0.00640311519790888 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -0.14 0.0969590179238237 -0.0135742625093353 581. Brown enviromental changes :aa starv 4 h(1) 779 induced -0.22 0.0968581964152353 -0.0213088032113518 STP2OE+ 1265 induced 0.040852 0.0968152539208364 0.00395509675317401 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced -0.206 0.0966719566840926 -0.0199144230769231 455. Expression in response to high MNNG (27 microgram/ml) for 60 min(1) 612 induced 0 0.0966075429424944 0 YMR239C 1128 induced 0.14355 0.0963083457804332 0.0138250630367812 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced 0 0.0962163928304705 0 459. Expression of G2 arrested cells (alpha nocodazole) in response to 0.1% MMS for 60 min(1) 616 repressed 0 0.0961594473487677 0 RSC30OE+ 1257 repressed -0.007355 0.0959974794622853 0.000706061461445108 Low-Pi vs High-Pi in WT (NBW7) exp2(1) 578 induced -0.029 0.0959022591486184 -0.00278116551530993 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 induced -0.17 0.0958952576549664 -0.0163021938013443 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced -0.133 0.0958532486930545 -0.0127484820761763 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed -0.15 0.0957360903659447 0.0143604135548917 651. Brown enviromental changes :25 deg growth ct-1(1) 842 repressed -0.09 0.0956511389096341 0.00860860250186707 YDL031W 1031 induced 0.072745 0.09538928304705 0.00693909339525765 261. Rosetta 2000: Expression in sgs1 deletion mutant (1) 380 induced -0.359 0.0953454070201643 -0.034229001120239 225. Rosetta 2000: Expression in pfd2 (**14) deletion mutant (1) 344 repressed 0.073 0.0951582337565347 -0.00694655106422703 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced 0 0.0950849514563107 0