Tea1-primary_8mers_111.1.1111_lteq600sum0.35thrbgdsub.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 1. Cell cycle: Expression in response to Cln3p (set 1)(1) 2 induced 1.31 0.09845407 0.128974832 -0.0054794706961326 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 induced -0.38 0.139111744 -0.052862463 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.21 0.134897778 -0.028328533 5. Expression during the cell cycle (alpha factor arrest and release)(4) 9 induced 0.08 0.124540235 0.009963219 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 repressed 0.17 0.11351755 -0.019297984 6. Expression during the cell cycle (cdc15 arrest and release)(11) 34 induced -0.7 0.099824029 -0.06987682 7. Expression during the cell Cycle (cdc28)(9) 56 repressed -0.31 0.102863144 0.031887575 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.31 0.101929145 -0.031598035 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(2) 80 induced 0.089 0.110379481 0.009823774 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(3) 81 induced 0.556 0.097553211 0.054239586 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(6) 84 repressed -0.111 0.100824776 0.01119155 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.089 0.097380041 -0.008666824 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.184 0.10228342 -0.018820149 12. Expression in tup1-deleted cells(1) 96 induced 0.124 0.127866878 0.015855493 17. parental strain versus evolved strain 2(1) 101 induced 0 0.096327016 0 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.114850635 0 31. Young: Expression in srb10 mutant(1) 115 induced 0 0.108583831 0 32. Young: Expression in swi2 mutant(1) 116 repressed 0.422 0.098476008 -0.041556875 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.11873273 0 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed -0.309 0.110221714 0.03405851 45. Expression in snf2 mutant cells in minimal medium(1) 135 induced -0.31 0.102538742 -0.03178701 47. Expression in swi1 mutant cells in minimal medium(1) 137 induced -0.259 0.108151606 -0.028011266 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(8) 145 repressed 0.422 0.105695482 -0.044603493 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(2) 147 repressed 0.184 0.096843727 -0.017819246 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 repressed 0.395 0.13534214 -0.053460145 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(2) 154 repressed 0.359 0.10199916 -0.036617698 52. Expression in response to 50 nM alpha-factor in fus3 deletion mutant 30 min(1) 157 repressed 0.075 0.103137603 -0.00773532 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.283 0.099165889 0.028063947 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed 0.018 0.10526699 -0.001894806 68. Expression in ste11 deletion mutant cells(1) 173 induced 0.092 0.108307039 0.009964248 76. Expression in tec1 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor: 30,120 min(2) 182 repressed -0.02 0.099066934 0.001981339 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed 0.013 0.117289955 -0.001524769 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.015 0.109882375 0.001648236 87. Expression in response to a-factor in wild-type alpha cells(1) 193 repressed 0.297 0.103293503 -0.03067817 94. Expression in response to 1ug/mL FK506(1) 200 induced -0.193 0.116334018 -0.022452465 95. Expression in response to 50ug/mL FK506(1) 201 induced 1.272 0.095090553 0.120955183 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 repressed 0 0.100038275 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced -0.2 0.098133869 -0.019626774 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.309 0.10815814 0.033420865 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.276 0.109598581 0.030249208 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed 0.076 0.10445155 -0.007938318 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced 0.322 0.122224141 0.039356173 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.525 0.096232263 0.050521938 137. Rosetta 2000: Expression in clb2 deletion mutant (1) 256 induced 1.033 0.107147125 0.11068298 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.439 0.104375467 0.04582083 179. Rosetta 2000: Expression in gln3 deletion mutant (1) 298 induced 0.326 0.118162808 0.038521075 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 repressed 0.06 0.104185493 -0.00625113 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 0.761 0.121754108 0.092654876 186. Rosetta 2000: Expression in hir2 deletion mutant (1) 305 induced 0.419 0.09853342 0.041285503 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced 0.023 0.103681852 0.002384683 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed 0.066 0.101362957 -0.006689955 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed 0.415 0.098903099 -0.041044786 231. Rosetta 2000: Expression in rad57 deletion mutant (1) 350 induced 0.691 0.106486184 0.073581953 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.369 0.102246546 0.037728975 245. Rosetta 2000: Expression in rpl34a (**9) deletion mutant (1) 364 repressed -0.096 0.097351568 0.009345751 251. Rosetta 2000: Expression in rrp6 deletion mutant (1) 370 induced 0.425 0.099099608 0.042117333 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.14 0.106973488 -0.014976288 264. Rosetta 2000: Expression in sin3 deletion mutant (1) 383 induced 0.093 0.113190814 0.010526746 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced 0.611 0.113855489 0.069565704 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.94 0.099165889 0.093215935 274. Rosetta 2000: Expression in ste11 (haploid) deletion mutant (1) 393 induced 0.306 0.108307039 0.033141954 283. Rosetta 2000: Expression in swi4 deletion mutant (1) 402 induced 1.937 0.121215459 0.234794345 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.193 0.106590739 0.020572013 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.734 0.135326736 0.099329824 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.149 0.11959578 0.017819771 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced 0.369 0.120851382 0.04459416 302. Rosetta 2000: Expression in yap1 deletion mutant (1) 421 induced 0.203 0.096524925 0.01959456 324. Rosetta 2000: Expression in yer044c (haploid) deletion mutant (1) 443 induced 1.043 0.099642924 0.10392757 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 repressed -0.09 0.097894417 0.008810498 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.066 0.109573376 -0.007231843 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced 0.382 0.111766243 0.042694705 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.179 0.100713219 0.018027666 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.993 0.118479276 0.117649921 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0.179 0.117073376 0.020956134 401. Rosetta 2000: Expression in response to HU(1) 520 induced 0.701 0.104889843 0.07352778 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.478 0.097823469 0.046759618 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 1.212 0.098272965 0.119106833 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed -0.17 0.108554425 0.018454252 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(11) 550 induced 0.1 0.104058532 0.010405853 pho80 vs WT(1) 581 induced -0.168 0.110210978 -0.018515444 PHO81c vs WT exp1(1) 583 induced -0.074 0.096811053 -0.007164018 PHO81c vs WT exp2(1) 584 induced -1 0.138436333 -0.138436333 429. Expression in strain YHE711 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 586 induced 0.95 0.109960325 0.104462309 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced -1.544 0.117946695 -0.182109698 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0.17 0.104565441 0.017776125 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced -1.307 0.102879014 -0.134462872 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced -0.907 0.104548637 -0.094825614 468. Expression in sin33 deletion(1) 625 repressed -0.546 0.09892177 0.054011286 469. Expression in hda1 deletion(1) 626 induced 0.329 0.132767924 0.043680647 470. Expression in hda1 deletion(1) 627 induced 0.309 0.119074403 0.03679399 473. Expression in ume6 deletion(1) 630 induced -0.298 0.107065907 -0.03190564 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(2) 639 induced 0 0.105754761 0 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced -1.291 0.103888163 -0.134119618 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -1.226 0.118778473 -0.145622408 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -1.615 0.116059093 -0.187435435 480. Expression in haploid cells deprived to amino acids in response to rapamycin for: 15min,30min,60min,90min,120min(5) 651 induced 2.09 0.100680545 0.210422339 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced 0 0.097026699 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(5) 667 induced 0 0.096558066 0 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced 0 0.10128314 0 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced -0.69 0.121271471 -0.083677315 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed 0 0.099319455 0 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed 1.02 0.102354369 -0.104401456 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.53 0.110776232 -0.058711403 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced -0.57 0.120655807 -0.06877381 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 induced -0.38 0.097199869 -0.03693595 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.94 0.11848301 -0.111374029 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.22 0.096151979 -0.021153435 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.54 0.0985927 -0.053240058 581. Brown enviromental changes :aa starv 4 h(1) 779 induced -0.38 0.112144324 -0.042614843 582. Brown enviromental changes :aa starv 6 h(1) 780 induced -0.47 0.122386576 -0.057521691 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced -1.55 0.097422517 -0.151004901 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced -1.46 0.097256815 -0.14199495 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced -1.4 0.103393857 -0.1447514 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced -1.05 0.102134522 -0.107241248 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced -0.44 0.108937173 -0.047932356 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced -1.03 0.110344473 -0.113654808 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 0.09 0.113563294 0.010220696 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced -0.82 0.096297143 -0.078963658 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced -0.86 0.099302184 -0.085399879 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced -0.07 0.105998413 -0.007419889 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced -0.67 0.100357076 -0.067239241 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced -0.31 0.117760922 -0.036505886 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced -1.36 0.122612491 -0.166752987 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced -0.34 0.120208178 -0.04087078 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced -0.9 0.107442588 -0.096698329 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 repressed 0.14 0.103574963 -0.014500495 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed -0.02 0.118464339 0.002369287 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.89 0.098227689 -0.087422643 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced 0.39 0.102366038 0.039922755 672. Expression in response to carbonyl cyanide m-chlorophenylhydrazone (CCCP) 90min(1) 860 induced 0 0.10528146 0 Addition of 1M NaCl (90) 917 induced 0.85 0.109731143 0.093271471 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.033 0.096827857 0.003195319 wt_plus_gamma_5_min 936 induced -0.47 0.103911501 -0.048838406 wt_plus_gamma_30_min 939 repressed -0.15 0.099208831 0.014881325 wt_plus_gamma_90_min 942 induced 0.35 0.0965646 0.03379761 DES460 (wt) - mock irradiation - 5 min 944 induced 0.07 0.102224608 0.007155723 mec1_plus_gamma_45_min 952 repressed -0.445 0.103856423 0.046216108 mec1_plus_gamma_60_min 953 repressed -0.203 0.111071229 0.022547459 DES459 (mec1) + heat 20 min 961 repressed -0.763 0.095883588 0.073159178 wt-gal 973 induced 0 0.097532674 0 gal5+gal 979 induced 0.747 0.101783047 0.076031936 gal7+gal 981 induced -1.399 0.132602689 -0.185511161 gal10+gal 982 induced -2.528 0.101279873 -0.256035519 gal2-gal 985 induced 0 0.139260176 0 gal3-gal 986 induced -0.123 0.119999533 -0.014759943 gal4-gal 987 induced 0.13 0.122161594 0.015881007 gal5-gal 988 induced 0.521 0.098736464 0.051441698 gal6-gal 989 induced 0.352 0.097234877 0.034226677 gal7-gal 990 bimodal 0.253 0.103399459 0.026160063 gal10-gal 991 induced -0.917 0.108906833 -0.099867566 gal1gal10+gal 993 induced -0.392 0.115584858 -0.045309264 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0 0.101184186 0 sfp1::GALSFP1 t=20min GAL vs. t=0 RAFF (YT00234) 1002 repressed 0 0.114976195 0 sfp1::GALSFP1 t=40min GAL vs. t=0 RAFF (YT00268) 1004 repressed 0 0.123059653 0 sfp1::GALSFP1 t=60min GAL vs. t=0 RAFF (YT00267) 1006 repressed 0 0.095509242 0 YAL003W 1008 induced 0.46787 0.102003361 0.047724312 YAL038W 1010 induced -0.050148 0.114856703 -0.005759834 YBL020W 1013 induced -0.3845 0.095884055 -0.036867419 YBL084C 1015 induced 0.10271 0.107553678 0.011046838 YBR142W 1019 induced 0.093884 0.098433066 0.00924129 YBR196C 1024 induced -0.44292 0.125890123 -0.055759253 YDL055C 1033 induced -0.12557 0.103904966 -0.013047347 YDR489W 1047 induced -0.097758 0.099700803 -0.009746551 YER023W 1049 induced 0.16214 0.098698656 0.016003 YFL024C 1052 induced -0.010032 0.122619959 -0.001230123 YJL011C 1078 induced 0.90669 0.096083364 0.087117826 YJL081C 1082 induced -0.0037515 0.123806479 -0.00046446 YKR079C 1094 induced 0.0026566 0.112658701 0.000299289 YLL003W 1096 induced -0.13154 0.100322535 -0.013196426 YLR076C 1101 induced -0.043483 0.123328977 -0.005362714 YLR086W 1102 induced 0.083148 0.103764937 0.008627847 YLR101C 1103 induced 0.051401 0.095087752 0.004887606 YLR163C 1105 induced 0.16432 0.110916262 0.01822576 YLR459W 1117 induced -0.024847 0.102178865 -0.002538838 YML031W 1118 induced -0.091868 0.102050971 -0.009375219 YMR079W 1124 induced 0.25364 0.101670556 0.02578772 YMR200W 1126 induced -0.020564 0.10931292 -0.002247911 YNL272C 1136 induced -0.067823 0.107694642 -0.007304174 YNR043W 1139 induced 0.034678 0.09771658 0.003388616 YOR060C 1147 induced -0.14626 0.114444081 -0.016738591 YOR204W 1155 induced -0.25359 0.104617718 -0.026530007 YPL243W 1174 induced -0.15558 0.102378641 -0.015928069 YDR412W 1186 induced 0.090607 0.09584438 0.008684172 YGL122C 1192 induced -0.12893 0.101925878 -0.013141303 YGR198W 1196 induced -0.040939 0.100515777 -0.004115015 YKL082C 1205 repressed -0.18434 0.100584858 0.018541813 YNL245C 1215 induced 0.096532 0.098954444 0.00955227 YPL075W 1221 induced -0.033697 0.097078977 -0.00327127 ADR1OE+ 1224 induced -0.0107485 0.096796583 -0.001040418 BYE1OE+ 1225 induced -0.042133 0.100436893 -0.004231708 GAT4OE+ 1232 induced -0.088781 0.101580471 -0.009018416 HAC1OE+ 1237 repressed -0.058704 0.113378454 0.006655769 MGA1OE+ 1245 induced 0.054553 0.099396471 0.005422376 RFX1OE+ 1253 induced 0.0997335 0.103073656 0.010279896 SKN7OE+ 1260 induced 0.027976 0.10042009 0.002809352 SUT1OE+ 1267 repressed -0.0436875 0.110425224 0.004824202 SWI4OE+ 1268 induced -0.0123055 0.123598768 -0.001520945 TOS8OE+ 1269 induced 0.2237485 0.103593633 0.02317892