Ynr063w-primary_8mers_11111111_lteq600sum0.35thrbgdsub.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 induced -0.4 0.111731236 -0.044692494 -0.00627108092786885 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced -0.26 0.097023898 -0.025226214 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.2 0.10050084 -0.020100168 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed 0.07 0.12851335 -0.008995934 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed 0 0.101724235 0 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed 0 0.099023525 0 6. Expression during the cell cycle (cdc15 arrest and release)(12) 35 repressed 0 0.101946882 0 6. Expression during the cell cycle (cdc15 arrest and release)(14) 37 repressed -0.14 0.09956124 0.013938574 7. Expression during the cell Cycle (cdc28)(9) 56 induced 0.02 0.110131628 0.002202633 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.4 0.097993372 -0.039197349 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced -0.14 0.112631628 -0.015768428 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed 0.22 0.101883402 -0.022414348 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed -0.14 0.100902726 0.014126382 8. Expression during the cell cycle (cell size selection and release)(7) 71 repressed -0.19 0.101145911 0.019217723 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.47 0.122115385 0.057394231 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced 0.05 0.123616972 0.006180849 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.474 0.099332524 -0.047083617 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.34 0.10339199 -0.035153277 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.136 0.131729369 -0.017915194 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.218 0.125134895 -0.027279407 12. Expression in tup1-deleted cells(1) 96 induced -0.322 0.197024832 -0.063441996 16. parental strain versus evolved strain 1(1) 100 repressed 0.16 0.108618372 -0.01737894 32. Young: Expression in swi2 mutant(1) 116 repressed 0 0.111179985 0 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.111537528 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(4) 125 induced 0 0.109961725 0 Young: Expression during histone H4 depletion: 0h,0.5h,1h,1.5h,2h,4h,6h(6) 127 induced 0 0.098534354 0 45. Expression in snf2 mutant cells in minimal medium(1) 135 bimodal 0.461 0.109352128 0.050411331 46. Expression in swi1 mutant cells in YPD(1) 136 induced 0.494 0.104182692 0.05146625 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed 0.69 0.110850448 -0.076486809 54. Expression in response to overproduction of Ste5p(1) 159 induced 0.201 0.105885456 0.021282977 55. Expression in response to overproduction of Ste11p(1) 160 bimodal 0.264 0.102085978 0.026950698 56. Expression in response to overproduction of Ste12p(1) 161 repressed 0.348 0.10354789 -0.036034666 59. Expression in sst2 deletion mutant cells(1) 164 induced 0.063 0.099458084 0.006265859 60. Expression in response to alpha-factor in ste20 deletion mutant cells(1) 165 repressed -0.006 0.096453043 0.000578718 62. Expression in response to osmotic shock in hog1 deletion mutant cells(1) 167 induced -2 0.112471994 -0.224943988 65. Expression in ste4 deletion mutant cells(1) 170 induced 0.004 0.107138256 0.000428553 67. Expression in ste7 deletion mutant cells(1) 172 repressed 0.07 0.118714526 -0.008310017 73. Expression in response to overproduction of activated Pkc1p(1) 178 induced 0.073 0.114356329 0.008348012 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed 0.078 0.111821789 -0.0087221 79. Expression in fus3 deletion mutant cells(1) 185 induced 0.015 0.110606796 0.001659102 81. Expression in fus3 tec1 double deletion mutant cells treated with alpha-factor compared to wild-type untreated cells(1) 187 repressed -0.008 0.097206871 0.000777655 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced -0.04 0.135667942 -0.005426718 103. Young: Expression in taf60 deletion mutant(1) 209 induced 0 0.09566981 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0 0.109512229 0 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced -0.233 0.115554985 -0.026924312 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.103 0.158838219 0.016360337 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.339 0.095217046 0.032278579 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.515 0.098960978 0.050964904 130. Rosetta 2000: Expression in cat8 deletion mutant (1) 249 induced -0.046 0.09679705 -0.004452664 131. Rosetta 2000: Expression in cbp2 deletion mutant (1) 250 induced 0.027 0.103347181 0.002790374 132. Rosetta 2000: Expression in cem1 deletion mutant (1) 251 induced 0.01 0.106945948 0.001069459 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 induced 0.176 0.109256441 0.019229134 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 bimodal -0.086 0.134352595 -0.011554323 143. Rosetta 2000: Expression in cup5 deletion mutant (1) 262 induced -0.103 0.127711445 -0.013154279 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced 0.146 0.106448376 0.015541463 149. Rosetta 2000: Expression in dig1, dig2 (haploid) deletion mutant (1) 268 induced -0.591 0.099178025 -0.058614213 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed 0.076 0.10356376 -0.007870846 161. Rosetta 2000: Expression in erg2 deletion mutant (1) 280 induced 0.365 0.099622853 0.036362341 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.096 0.106681759 0.010241449 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced 0.05 0.110606796 0.00553034 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 repressed -0.06 0.104872106 0.006292326 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced -0.531 0.118095127 -0.062708512 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced -0.076 0.098495146 -0.007485631 183. Rosetta 2000: Expression in hda1 deletion mutant (1) 302 induced 0.173 0.118197349 0.020448141 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 induced 0.126 0.12626587 0.0159095 193. Rosetta 2000: Expression in imp2 deletion mutant (1) 312 induced -0.063 0.100409821 -0.006325819 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced -0.256 0.117540142 -0.030090276 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 induced -0.01 0.102377707 -0.001023777 197. Rosetta 2000: Expression in isw2 deletion mutant (1) 316 repressed -0.176 0.102845407 0.018100792 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced -0.01 0.115463032 -0.00115463 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed 0.123 0.104009055 -0.012793114 205. Rosetta 2000: Expression in mak10 deletion mutant (1) 324 induced 0.02 0.109504294 0.002190086 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed -0.103 0.106245799 0.010943317 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 bimodal 0.096 0.105937733 0.010170022 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 bimodal 0.05 0.107912155 0.005395608 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced -0.279 0.100472367 -0.028031791 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 repressed -0.977 0.101398432 0.099066268 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.233 0.098448469 -0.022938493 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced -0.093 0.103349048 -0.009611461 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.149 0.09806292 0.014611375 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.196 0.145345874 -0.028487791 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced 0.053 0.116942681 0.006197962 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed 0.249 0.111018484 -0.027643603 269. Rosetta 2000: Expression in sod1 (haploid) deletion mutant (1) 388 induced 0.223 0.121186987 0.027024698 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced -0.475 0.122460325 -0.058168654 272. Rosetta 2000: Expression in sst2 (haploid) deletion mutant (1) 391 induced 0.209 0.099458084 0.02078674 280. Rosetta 2000: Expression in ste4 (haploid) deletion mutant (1) 399 induced 0.013 0.107138256 0.001392797 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.03 0.138402259 0.004152068 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced -0.013 0.102229742 -0.001328987 289. Rosetta 2000: Expression in top3 (haploid) deletion mutant (1) 408 induced 0.066 0.120653473 0.007963129 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced -0.11 0.216401232 -0.023804136 296. Rosetta 2000: Expression in vma8 deletion mutant (1) 415 induced -0.02 0.14345127 -0.002869025 300. Rosetta 2000: Expression in yaf1 deletion mutant (1) 419 repressed 0.126 0.100293596 -0.012636993 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced 0.332 0.126440441 0.041978226 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced -0.282 0.111425037 -0.031421861 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced -0.123 0.096667756 -0.011890134 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.169 0.099778753 -0.016862609 344. Rosetta 2000: Expression in yjl107c (haploid) deletion mutant (1) 463 repressed 0.332 0.102582151 -0.034057274 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced -0.033 0.128426064 -0.00423806 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced -0.036 0.152945295 -0.005506031 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.156 0.103424197 0.016134175 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 induced 0.625 0.106520724 0.066575453 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced -0.16 0.10353342 -0.016565347 389. Rosetta 2000: Expression in cells with HMG2 under tet promoter(1) 508 induced 0.528 0.126608943 0.066849522 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced -0.08 0.158422797 -0.012673824 399. Rosetta 2000: Expression in response to FR901,228(1) 518 repressed -0.671 0.108312173 0.072677468 401. Rosetta 2000: Expression in response to HU(1) 520 induced 0.485 0.105213312 0.051028456 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 0 0.1060941 0 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.518 0.10523525 0.05451186 404. Rosetta 2000: Expression in response to MMS(1) 523 induced 1.189 0.099940721 0.118829517 406. Rosetta 2000: Expression in response to Terbinafine(1) 525 induced 0.233 0.106186987 0.024741568 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0 0.1034368 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(2) 528 repressed 0 0.096484317 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0 0.126126307 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(7) 533 induced 0 0.104101475 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(11) 537 repressed 0 0.102641897 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 induced 0 0.111501587 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 repressed 0 0.112865011 0 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(8) 547 induced 0 0.140921397 0 Expression in PDR1-3 mutant(1) 555 repressed 0.043 0.100219847 -0.004309453 Starvation in SK1 alpha alpha cells: 2h,4h,6h,8h(2) 565 repressed 0 0.095781833 0 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(4) 574 repressed 0 0.100052745 0 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced -0.34 0.116920743 -0.039753053 PHO81c vs WT exp2(1) 584 induced -0.074 0.103317774 -0.007645515 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced -1.875 0.103486744 -0.194037645 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced 0 0.155049944 0 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.959 0.148749066 -0.142650355 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced -1.057 0.102497666 -0.108340033 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced -0.384 0.103375653 -0.039696251 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced 0 0.140533981 0 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced -3.083 0.099318988 -0.30620044 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0 0.131342886 0 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced 0 0.108153006 0 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced -1.301 0.110927465 -0.144316631 465. Expression in rpd3 deletion(1) 622 repressed -0.821 0.102203603 0.083909158 467. Expression in sin3 deletion(1) 624 repressed -0.811 0.099477689 0.080676405 468. Expression in sin33 deletion(1) 625 repressed -0.482 0.135323469 0.065225912 469. Expression in hda1 deletion(1) 626 induced -0.342 0.156863798 -0.053647419 470. Expression in hda1 deletion(1) 627 induced 0.099 0.132572349 0.013124663 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced -1.22 0.104117345 -0.127023161 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -1.704 0.107047704 -0.182409287 479. Expression in diploid cells in response to rapamycin (100nM) for: 15min,30min,90min,120min(2) 644 induced -2.15 0.1104691 -0.237508565 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0 0.096755508 0 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 0 0.111650952 0 485. Expression in response to peroxide: 10,20,40,60,120 min(1) 671 induced 0 0.105258588 0 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced 0 0.106724235 0 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 induced 0 0.099924384 0 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced 0 0.118657114 0 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced 0 0.109564507 0 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced -0.94 0.1398441 -0.131453454 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0 0.126309279 0 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced -0.32 0.13292009 -0.042534429 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced 0 0.1189073 0 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.27 0.109755881 0.029634088 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed -0.25 0.130677278 0.032669319 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed 0 0.136478249 0 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.76 0.111146845 0.084471602 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 induced -0.67 0.098417662 -0.065939834 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced -0.27 0.122267084 -0.033012113 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced -0.86 0.132695108 -0.114117793 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced -0.62 0.120608196 -0.074777082 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced -0.64 0.121989358 -0.078073189 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced -0.56 0.124311987 -0.069614712 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced -0.45 0.109807226 -0.049413251 515. Brown enviromental changes :29C to 33C - 30 minutes(1) 713 repressed 0.66 0.097956031 -0.06465098 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced -0.94 0.12349888 -0.116088947 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced -1.29 0.100238984 -0.12930829 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 bimodal 0.2 0.097552745 0.019510549 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed 0.32 0.118401792 -0.037888574 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced -0.51 0.121447909 -0.061938434 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced -0.3 0.116774645 -0.035032394 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced -0.27 0.10711165 -0.028920146 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced -0.15 0.107347367 -0.016102105 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.16 0.113988984 0.018238237 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced -0.54 0.1034382 -0.055856628 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.4 0.119466019 0.047786408 535. Brown enviromental changes :1 mM Menadione (30 min) redo(1) 733 induced -0.23 0.110605863 -0.025439348 536. Brown enviromental changes :1mM Menadione (40 min) redo(1) 734 induced -0.2 0.104744212 -0.020948842 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced -0.23 0.101706497 -0.023392494 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 induced 0 0.111179052 0 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -1.09 0.103225822 0.112516145 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed -0.84 0.10442121 0.087713816 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -1.09 0.103203417 -0.112491724 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.29 0.133359317 -0.038674202 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced 0 0.133257095 0 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced 0 0.12473441 0 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced 0 0.125503174 0 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced 0 0.126651419 0 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced -0.03 0.0990632 -0.002971896 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced -0.25 0.096664022 -0.024166005 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced -0.04 0.130800037 -0.005232001 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.28 0.100833645 -0.02823342 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced -0.47 0.104856703 -0.04928265 579. Brown enviromental changes :aa starv 1 h(1) 777 induced -0.11 0.099244305 -0.010916874 581. Brown enviromental changes :aa starv 4 h(1) 779 induced -1 0.096947349 -0.096947349 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.92 0.112072442 0.103106647 585. Brown enviromental changes :Nitrogen Depletion 2 h(1) 783 repressed 0 0.119804892 0 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed 0 0.14167149 0 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 induced 0 0.101461912 0 590. Brown enviromental changes :Nitrogen Depletion 2 d(1) 788 induced 0 0.095914395 0 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.1 0.12913835 0.012913835 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 1.12 0.137631628 0.154147423 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 1.76 0.147579817 0.259740478 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 0.57 0.11695155 0.066662383 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 0.18 0.125066281 0.022511931 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 1.02 0.126509522 0.129039712 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 1.09 0.131633215 0.143480204 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 2.38 0.120097087 0.285831068 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.69 0.115581591 -0.079751298 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.04 0.154158887 0.006166355 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced -0.1 0.147116785 -0.014711678 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 0.11 0.127415049 0.014015655 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 0.38 0.155592326 0.059125084 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 1.13 0.145180639 0.164054122 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 0.9 0.141777913 0.127600121 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 0 0.154851102 0 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 1.04 0.114831964 0.119425243 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 1.11 0.113481143 0.125964068 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced -0.2 0.105881721 -0.021176344 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.12 0.109728342 0.013167401 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 induced 0.46 0.103165142 0.047455965 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced -1.74 0.105350541 -0.183309942 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced -0.67 0.127684373 -0.08554853 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.03 0.107587752 0.003227633 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced -0.25 0.101109503 -0.025277376 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.51 0.120528846 0.061469712 638. Brown enviromental changes :glucose car-1(1) 829 repressed -0.21 0.108432599 0.022770846 640. Brown enviromental changes :raffinose car-1(1) 831 repressed 0.71 0.097265683 -0.069058635 641. Brown enviromental changes :sucrose car-1(1) 832 repressed -0.24 0.096869866 0.023248768 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced -0.74 0.102481329 -0.075836184 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed 0 0.118433999 0 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed 0.38 0.126116972 -0.047924449 646. Brown enviromental changes :YP mannose vs reference pool car-2(1) 837 repressed 0 0.097289022 0 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed 0.23 0.108590833 -0.024975892 650. Brown enviromental changes :21 deg growth ct-1(1) 841 repressed -0.42 0.095770631 0.040223665 661. Brown enviromental changes :steady state 36 dec C ct-2(1) 852 induced -0.14 0.114096341 -0.015973488 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 0.444 0.129804425 0.057633165 678. Expression in gcr1 mutant YPGL+glucose versus gcr1 mutant YPGL(1) 866 bimodal 0.202 0.119799291 0.024199457 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 bimodal -0.911 0.133524085 -0.121640442 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 repressed -0.556 0.105213312 0.058498602 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 induced -0.4 0.110428958 -0.044171583 Addition of 1M NaCl (90) 917 induced 0.7 0.131718167 0.092202717 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -1.444 0.130268857 -0.18810823 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed 1.076 0.116519791 -0.125375295 DES459 (mec1-) + 0.02% MMS - 60 min 930 repressed 1.651 0.136180919 -0.224834697 DES459 (mec1-) + 0.02% MMS - 90 min 931 repressed 1.946 0.102958364 -0.200356977 wt_plus_gamma_5_min 936 induced 0 0.116408701 0 wt_plus_gamma_10_min 937 induced 0 0.119344193 0 wt_plus_gamma_20_min 938 induced -0.786 0.09798637 -0.077017287 wt_plus_gamma_30_min 939 induced 0 0.097276419 0 mec1_plus_gamma_10_min 949 induced 0 0.098457804 0 mec1_plus_gamma_20_min 950 repressed 0 0.099192494 0 mec1_plus_gamma_30_min 951 repressed 0 0.125579724 0 mec1_plus_gamma_45_min 952 repressed 0 0.116327483 0 mec1_plus_gamma_60_min 953 repressed -0.312 0.126409634 0.039439806 wt-gal 973 induced 0 0.095761763 0 gal1+gal 975 bimodal 0.412 0.100506908 0.041408846 gal3+gal 977 induced -0.1 0.145574589 -0.014557459 gal4+gal 978 induced -0.585 0.112331031 -0.065713653 gal7+gal 981 induced -0.053 0.144712939 -0.007669786 gal10+gal 982 induced -0.116 0.132767924 -0.015401079 gal1-gal 984 induced 0.063 0.103694455 0.006532751 gal2-gal 985 induced 0.296 0.122192401 0.036168951 gal3-gal 986 induced 0.551 0.115456964 0.063616787 gal4-gal 987 induced -0.97 0.113163275 -0.109768377 gal5-gal 988 induced 0.721 0.110475635 0.079652933 gal6-gal 989 induced 0.997 0.112314694 0.11197775 gal7-gal 990 repressed 0.887 0.121442308 -0.107719327 gal10-gal 991 induced -0.468 0.123025112 -0.057575752 gal1gal10+gal 993 induced 0.349 0.133366785 0.046545008 gal2gal80-gal 994 repressed 0.465 0.114764283 -0.053365392 gal4gal80-gal 995 repressed 0.615 0.100905993 -0.062057186 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced 0 0.123703323 0 YAL038W 1010 induced -0.018796 0.117566748 -0.002209785 YBL020W 1013 induced -0.07116 0.129008588 -0.009180251 YBL040C 1014 induced 0.11306 0.100084018 0.011315499 YBR088C 1018 induced 0.077756 0.146221994 0.011369637 YBR142W 1019 induced 0.10454 0.103346247 0.010803817 YBR192W 1022 induced -0.3632 0.099643857 -0.036190649 YBR243C 1026 induced -0.41658 0.104994399 -0.043738567 YDL031W 1031 induced 0.17388 0.115848114 0.02014367 YDL047W 1032 induced -0.06466 0.108944175 -0.00704433 YDL055C 1033 induced 0.13937 0.107908887 0.015039262 YDL132W 1037 induced -0.026975 0.119880975 -0.003233789 YDR047W 1039 induced 0.12989 0.103027913 0.013382296 YDR141C 1042 induced 0.34116 0.116069361 0.039598223 YDR489W 1047 induced 0.06694 0.122777259 0.00821871 YER023W 1049 induced 0.0050931 0.09732823 0.000495702 YGL116W 1055 induced -0.0023301 0.097317494 -0.000226759 YGR048W 1057 induced 0.23533 0.098379854 0.023151731 YGR175C 1062 induced 0.15372 0.121467513 0.018671986 YHR090C 1068 induced 0.032258 0.10586165 0.003414885 YHR118C 1069 induced -0.35619 0.108865758 -0.038776894 YJL081C 1082 induced -0.13868 0.128139937 -0.017770446 YJL091C 1083 induced 0.0419 0.101176251 0.004239285 YJL194W 1084 induced 0.24242 0.115512043 0.028002429 YKL052C 1089 induced 0.11235 0.110956404 0.012465952 YKR079C 1094 induced -0.12345 0.12442401 -0.015360144 YKR086W 1095 induced -0.15751 0.112476662 -0.017716199 YLL003W 1096 induced -0.11559 0.113577296 -0.0131284 YLR076C 1101 induced -0.18245 0.122212939 -0.022297751 YLR086W 1102 induced 0.009255 0.115136296 0.001065586 YLR101C 1103 induced 0.21589 0.103888163 0.022428415 YLR163C 1105 induced 0.22691 0.123267364 0.027970597 YLR459W 1117 induced 0.30815 0.123548824 0.03807157 YMR001C 1121 induced 0.046389 0.108912901 0.005052361 YMR043W 1122 induced -0.14142 0.113507748 -0.016052266 YMR079W 1124 induced 0.089451 0.11693848 0.010460264 YMR239C 1128 induced 0.12199 0.102178865 0.0124648 YNL131W 1131 induced -0.03261 0.096134709 -0.003134953 YNL150W 1132 induced -0.13018 0.103315441 -0.013449604 YNL158W 1133 induced 0.34501 0.111128641 0.038340492 YNL272C 1136 induced 0.1403 0.102777726 0.014419715 YNR035C 1138 induced -0.029801 0.116083364 -0.0034594 YNR043W 1139 induced -0.1282 0.116465646 -0.014930896 YOR236W 1158 induced -0.07688 0.099839432 -0.007675656 YOR261C 1160 induced 0.01773 0.095842046 0.001699279 YOR335C 1164 induced -0.096395 0.109818895 -0.010585992 YOR372C 1165 induced -0.1813 0.104381068 -0.018924288 YPL010W 1166 induced 0.099319 0.11913835 0.011832702 YPL063W 1167 induced 0.052687 0.121346621 0.006393389 YPL228W 1172 induced 0.065405 0.103316374 0.006757407 YPL243W 1174 induced -0.04602 0.114959858 -0.005290453 YPR105C 1176 induced 0.10414 0.101301344 0.010549522 YPR169W 1178 induced -0.32249 0.110226848 -0.035547056 YPR178W 1179 induced 0.69058 0.113182879 0.078161833 YPR180W 1180 induced 0.11513 0.120335138 0.013854184 YBR029C 1182 induced -0.092942 0.122664302 -0.011400666 YFR037C 1190 induced 0.024785 0.111446509 0.002762202 YGL073W 1191 induced 0.14797 0.106317681 0.015731827 YGL122C 1192 induced -0.31899 0.101083364 -0.032244582 YGR198W 1196 induced -0.14948 0.137272685 -0.020519521 YJL097W 1202 induced 0.043841 0.12501587 0.005480821 YKL033W 1204 induced -0.059443 0.103741131 -0.006166684 YMR235C 1212 induced -0.15429 0.103639843 -0.015990591 YNL258C 1216 induced 0.39735 0.101991692 0.040526399 YOR077W 1220 induced 0.27638 0.099471621 0.027491967 YPL075W 1221 induced -0.01451 0.11442401 -0.001660292 ADR1OE+ 1224 induced -0.0107685 0.09589059 -0.001032598 ECM22OE+ 1230 induced 0.046535 0.116514656 0.00542201 GAT3OE+ 1231 induced 0.703737 0.115961072 0.081606097 GAT4OE+ 1232 induced NaN 0.16528286 0 GIS1OE+ 1234 induced 0.38775 0.105462099 0.040892929 GZF3OE+ 1236 induced -0.192204 0.11123413 -0.021379645 HAC1OE+ 1237 repressed 0.258205 0.100543316 -0.025960787 HMS1OE+ 1239 induced -0.383754 0.119261109 -0.045766928 MGA1OE+ 1245 induced 0.054371 0.143210885 0.007786519 MIG1OE+ 1246 induced -0.0229135 0.101490851 -0.002325511 MOT3OE+ 1247 induced 0.004896 0.130731423 0.000640061 MSN2OE+ 1248 induced -0.016006 0.107853809 -0.001726308 RFX1OE+ 1253 induced -0.025583 0.150133962 -0.003840877 RME1OE+ 1255 induced NaN 0.109488891 0 ROX1OE+ 1256 induced NaN 0.154665795 0 SOK2OE+ 1261 induced 0.349986 0.130999813 0.045848101 STP2OE+ 1265 induced 0.035524 0.113113798 0.004018255 SUT1OE+ 1267 repressed NaN 0.149955657 0 SWI4OE+ 1268 induced -0.180337 0.140013069 -0.025249537 UPC2OE+ 1270 induced 0.0608135 0.160918129 0.009785995 XBP1OE+ 1271 induced -0.1788035 0.112200336 -0.020061813 YHP1OE+ 1273 induced -0.040355 0.125743092 -0.005074362 YOX1OE+ 1274 induced -0.444241 0.146900672 -0.065259301 YPR015COE+ 1275 induced 0.0303965 0.097354836 0.002959246 WT/cst6+ 1282 induced 0.320205 0.10926531 0.034987299 WT/rgm1+ 1305 repressed NaN 0.116580937 0 WT/sok2+ 1312 induced -0.0376865 0.10207991 -0.003847035