Rph1-avgv9v11-0.35bgdsub_lteq600.txt_200 Significant Conditions: condindex ind/rep TFexpr area activator/repressor 2. Cell Cycle: Expression in response to Cln3p (set 2)(1) 3 repressed -0.6 0.129669529499627 0.0778017176997762 0.0209133823219668 4. Cell Cycle: Expression in response to Clb2p (set 2, 30 min)(1) 5 induced -0.25 0.147774925317401 -0.0369437313293502 5. Expression during the cell cycle (alpha factor arrest and release)(1) 6 induced 0.19 0.107502800597461 0.0204255321135176 5. Expression during the cell cycle (alpha factor arrest and release)(2) 7 induced 0.11 0.11041215459298 0.0121453370052278 5. Expression during the cell cycle (alpha factor arrest and release)(3) 8 induced -0.24 0.112262415982076 -0.0269429798356982 5. Expression during the cell cycle (alpha factor arrest and release)(8) 13 repressed 0 0.102923823749066 0 5. Expression during the cell cycle (alpha factor arrest and release)(9) 14 repressed 0.13 0.107291355489171 -0.0139478762135922 5. Expression during the cell cycle (alpha factor arrest and release)(12) 17 repressed 0.2 0.100458831217326 -0.0200917662434652 5. Expression during the cell cycle (alpha factor arrest and release)(16) 21 repressed 0.2 0.108396191187453 -0.0216792382374906 6. Expression during the cell cycle (cdc15 arrest and release)(2) 25 repressed 0.01 0.103027912621359 -0.00103027912621359 6. Expression during the cell cycle (cdc15 arrest and release)(3) 26 repressed -0.17 0.106722367438387 0.0181428024645258 6. Expression during the cell cycle (cdc15 arrest and release)(9) 32 induced 0.28 0.127527539208364 0.0357077109783419 6. Expression during the cell cycle (cdc15 arrest and release)(12) 35 repressed 0.56 0.104366131441374 -0.0584450336071694 6. Expression during the cell cycle (cdc15 arrest and release)(14) 37 repressed -0.06 0.0993171209858103 0.00595902725914862 6. Expression during the cell cycle (cdc15 arrest and release)(21) 44 induced 0.71 0.103196882001494 0.0732697862210607 6. Expression during the cell cycle (cdc15 arrest and release)(24) 47 repressed -0.74 0.0999971994025392 0.073997927557879 7. Expression during the cell Cycle (cdc28)(1) 48 induced 0.8 0.144206030619866 0.115364824495893 7. Expression during the cell Cycle (cdc28)(2) 49 induced 0.33 0.0977604555638536 0.0322609503360717 7. Expression during the cell Cycle (cdc28)(3) 50 repressed -0.41 0.128850821508589 0.0528288368185215 7. Expression during the cell Cycle (cdc28)(5) 52 repressed 0.01 0.100314600448096 -0.00100314600448096 7. Expression during the cell Cycle (cdc28)(10) 57 induced -0.59 0.119546303211352 -0.0705323188946977 7. Expression during the cell Cycle (cdc28)(11) 58 induced -0.32 0.0972997572815534 -0.0311359223300971 8. Expression during the cell cycle (cell size selection and release)(1) 65 induced -0.01 0.130896191187453 -0.00130896191187453 8. Expression during the cell cycle (cell size selection and release)(2) 66 induced 0.28 0.111793315907394 0.0313021284540703 8. Expression during the cell cycle (cell size selection and release)(5) 69 repressed 0.01 0.146699962658701 -0.00146699962658701 8. Expression during the cell cycle (cell size selection and release)(6) 70 repressed -0.05 0.181953883495146 0.0090976941747573 8. Expression during the cell cycle (cell size selection and release)(7) 71 repressed -0.08 0.159710604929052 0.0127768483943242 8. Expression during the cell cycle (cell size selection and release)(10) 74 repressed 0.1 0.123729929051531 -0.0123729929051531 8. Expression during the cell cycle (cell size selection and release)(11) 75 repressed -0.31 0.13957570948469 0.0432684699402539 8. Expression during the cell cycle (cell size selection and release)(12) 76 induced 0.01 0.144267643764003 0.00144267643764003 8. Expression during the cell cycle (cell size selection and release)(13) 77 induced -0.06 0.140729555638536 -0.00844377333831216 8. Expression during the cell cycle (cell size selection and release)(14) 78 induced 0.52 0.118236090365945 0.0614827669902914 9. Sporulation: time course: t0,t0.5,t2,t5,t7,t9,t11.5(7) 85 bimodal -0.411 0.0981301344286781 -0.0403314852501867 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(1) 86 induced -0.595 0.100470500373413 -0.0597799477221807 10. Sporulation: Ectopic expression of Ndt80; deletion of Ndt80: early, mid,(3) 88 repressed -0.731 0.117549477221807 0.0859286678491409 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(4) 92 induced -0.494 0.164193427931292 -0.0811115533980582 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(5) 93 induced -0.622 0.123946041822255 -0.0770944380134426 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(6) 94 induced -0.234 0.17691140776699 -0.0413972694174757 11. Expression during diauxic shift: 9h,11h,13h,15h,17h,19h,21h(7) 95 induced -0.304 0.176336351755041 -0.0536062509335325 12. Expression in tup1-deleted cells(1) 96 induced -0.474 0.148074122479462 -0.070187134055265 16. parental strain versus evolved strain 1(1) 100 repressed -0.64 0.104567307692308 0.0669230769230771 18. parental strain versus evolved strain 3(1) 102 repressed -0.45 0.171551530993279 0.0771981889469756 25. Fink: Expression in diploid ste7/ste7 deletion mutant(1) 109 repressed 0 0.103688386855863 0 27. Young: Expression in rpb1 mutant(1) 111 repressed -0.563 0.0963601568334578 0.0542507682972367 30. Young: Expression in med6 mutant(1) 114 repressed 0 0.0994921583271098 0 31. Young: Expression in srb10 mutant(1) 115 induced 0.373 0.132832337565347 0.0495464619118744 33. Young: Expression in taf145 mutant(1) 117 induced 0 0.129889843166542 0 36. Young: Expression in kin28 mutant(1) 120 repressed 0 0.097090646004481 0 43. Young: Expression in fcp1 deletion mutant(1) 133 repressed -0.496 0.112353435399552 0.0557273039581778 45. Expression in snf2 mutant cells in minimal medium(1) 135 repressed 0.064 0.114649458551158 -0.00733756534727411 47. Expression in swi1 mutant cells in minimal medium(1) 137 repressed -0.263 0.118758868558626 0.0312335824309186 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(2) 139 induced -0.018 0.100752427184466 -0.00181354368932039 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(3) 140 induced 0.041 0.1026428304705 0.0042083560492905 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(4) 141 induced 0.107 0.130839245705751 0.0139997992905154 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(5) 142 induced 0.112 0.126497386109037 0.0141677072442121 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(6) 143 induced 0.052 0.144653659447349 0.00752199029126215 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(7) 144 induced 0.032 0.119961258401792 0.00383876026885734 48. Expression in response to 0.15,0.5,1.5,5,15.8,50,158,500 nM alpha-factor(8) 145 induced 0.1 0.101453043315907 0.0101453043315907 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(2) 147 induced 0.076 0.0997526138909634 0.00758119865571322 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(3) 148 induced 0.064 0.132922423450336 0.0085070351008215 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(5) 150 induced 0.159 0.0992830470500373 0.0157860044809559 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(6) 151 induced 0.23 0.148558625840179 0.0341684839432412 49. Expression in response to 50 nM alpha-factor: 0,15,30,45,60,90,120 min(7) 152 induced 0.308 0.13053211351755 0.0402038909634054 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(1) 153 induced 0.175 0.113180078416729 0.0198065137229276 50. Expression in response to 50 nM alpha-factor in bni1 deletion mutant: 60,90,120 min(3) 155 induced 0.086 0.108747199402539 0.00935225914861835 51. Expression in response to 50 nM alpha-factor in kss1 deletion mutant 30 min(1) 156 induced 0.137 0.13061286407767 0.0178939623786408 52. Expression in response to 50 nM alpha-factor in fus3 deletion mutant 30 min(1) 157 induced -0.004 0.116995892457058 -0.000467983569828232 55. Expression in response to overproduction of Ste11p(1) 160 bimodal 0.199 0.107565814040329 0.0214055969940255 56. Expression in response to overproduction of Ste12p(1) 161 repressed -0.188 0.118747199402539 0.0223244734876773 57. Expression in response to alpha-factor in far1 deletion mutant cells(1) 162 induced 0.001 0.0989549103808813 0.0000989549103808813 61. Expression in response to alpha-factor in rst1 rst2 double deletion mutant cells(1) 166 induced 0.465 0.109037994772218 0.0507026675690814 63. Expression in response to alpha-factor in fus3 loss-of-function mutant cells(1) 168 induced -0.055 0.123129667662435 -0.00677213172143392 71. Expression in bni1 deletion mutant cells(1) 176 induced 0.02 0.154710138162808 0.00309420276325616 72. Expression in response to overproduction of activated Bni1p(1) 177 repressed 0.089 0.10817354368932 -0.00962744538834948 73. Expression in response to overproduction of activated Pkc1p(1) 178 induced 0.352 0.137669902912621 0.0484598058252426 74. Expression in response to overproduction of activated Rho1p(1) 179 induced 0.38 0.12995145631068 0.0493815533980584 75. Expression in fus3 deletion mutant cells treated with alpha-factor compared to wild-type cells treated with alpha-factor(1) 180 repressed -0.114 0.100738890963406 0.0114842335698283 77. Expression in tec1 deletion mutant cells(1) 183 induced -0.063 0.111813386855863 -0.00704424337191937 79. Expression in fus3 deletion mutant cells(1) 185 induced 0.07 0.138824682598954 0.00971772778192678 80. Expression in fus3 tec1 double deletion mutant cells(1) 186 repressed 0.068 0.156460044809559 -0.01063928304705 82. Expression in response to alpha-factor in fus3 deletion mutant cells(1) 188 repressed -0.083 0.111949682598954 0.00929182365571318 83. Expression in response to alpha-factor in fus3 tec1 double deletion mutant cells(1) 189 repressed -0.056 0.11308859223301 0.00633296116504856 84. Expression in rst1 rst2 tec1 triple deletion mutant cells(1) 190 induced -0.049 0.155781366691561 -0.00763328696788649 94. Expression in response to 1ug/mL FK506(1) 200 induced -0.01 0.10307645631068 -0.0010307645631068 95. Expression in response to 50ug/mL FK506(1) 201 induced -0.013 0.0960348207617625 -0.00124845266990291 96. Heat-shock induced expression in med2 deleted cells(1) 202 repressed 0.074 0.124540235250187 -0.00921597740851384 97. Church: mating type a GLUCOSE 30 C vs. mating type a GALACTOSE 30 C(1) 203 repressed 0 0.0994072068707991 0 98. Church: mating type A glucose 30 C vs. mating type ALPHA glactose 30 C(1) 204 repressed 0 0.12048497012696 0 99. Church: mating type a glucose 30 C vs. mating type a glactose 30 C FOLLOWED BY 30 C HEAT SHOCK(1) 205 induced 0 0.107362303958178 0 100. Young: Expression in spt20 deletion mutant(1) 206 repressed 0 0.116724234503361 0 102. Young: Expression in taf25_2 deletion mutant(1) 208 induced 0 0.108558159073936 0 105. Young: Expression in taf90 deletion mutant(1) 211 induced 0 0.10627427184466 0 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(2) 214 induced 0.23 0.15101288274832 0.0347329630321136 Heat shock unpublished data. From Eisen article: heat:0,10,20,40,80,160; dtt:15,30,60,120; cold:0,20,40,160(8) 220 repressed -0.71 0.0957202203136669 0.0679613564227035 110. Rosetta 2000: Expression in ade2 (haploid) deletion mutant (1) 229 induced 0.435 0.129149551904406 0.0561800550784166 111. Rosetta 2000: Expression in aep2 deletion mutant (1) 230 induced 0.498 0.119561239731143 0.0595414973861092 112. Rosetta 2000: Expression in afg3 (haploid) deletion mutant (1) 231 induced 0.375 0.126124439880508 0.0472966649551905 113. Rosetta 2000: Expression in ald5 deletion mutant (1) 232 repressed 0.033 0.10222787528006 -0.00337351988424198 114. Rosetta 2000: Expression in anp1 deletion mutant (1) 233 induced 0.242 0.0970654406273338 0.0234898366318148 117. Rosetta 2000: Expression in ard1 deletion mutant (1) 236 repressed -0.126 0.106653752800597 0.0134383728528752 123. Rosetta 2000: Expression in bim1 (**15) deletion mutant (1) 242 induced -0.179 0.127593353248693 -0.022839210231516 124. Rosetta 2000: Expression in bni1 (haploid) deletion mutant (1) 243 induced 0.066 0.130189040328603 0.0085924766616878 127. Rosetta 2000: Expression in bub3 (**2,8,13) deletion mutant (1) 246 induced 0.123 0.103106796116505 0.0126821359223301 130. Rosetta 2000: Expression in cat8 deletion mutant (1) 249 induced -0.116 0.133261762509335 -0.0154583644510829 133. Rosetta 2000: Expression in cin5 deletion mutant (1) 252 repressed 0.07 0.0963013442867812 -0.00674109410007468 134. Rosetta 2000: Expression in cka2 deletion mutant (1) 253 bimodal -0.057 0.168438666915609 -0.00960100401418971 135. Rosetta 2000: Expression in ckb2 deletion mutant (1) 254 induced 0.007 0.143767737117252 0.00100637415982076 139. Rosetta 2000: Expression in cmk2 deletion mutant (1) 258 induced -0.116 0.11228855489171 -0.0130254723674384 145. Rosetta 2000: Expression in cyt1 deletion mutant (1) 264 induced 0.465 0.102816934279313 0.0478098744398806 146. Rosetta 2000: Expression in dfr1 deletion mutant (1) 265 induced -0.179 0.114969193427931 -0.0205794856235996 148. Rosetta 2000: Expression in dig1, dig2 deletion mutant (1) 267 induced -0.615 0.113981516056759 -0.0700986323749068 151. Rosetta 2000: Expression in dot4 deletion mutant (1) 270 repressed -0.176 0.0964002987303958 0.0169664525765497 154. Rosetta 2000: Expression in ecm10 deletion mutant (1) 273 induced -0.027 0.152421116504854 -0.00411537014563106 158. Rosetta 2000: Expression in ecm34 deletion mutant (1) 277 induced -0.13 0.119316654219567 -0.0155111650485437 159. Rosetta 2000: Expression in eft2 deletion mutant (1) 278 repressed -0.04 0.135800037341299 0.00543200149365196 165. Rosetta 2000: Expression in erg6 deletion mutant (1) 284 bimodal 0.086 0.105420556385362 0.00906616784914113 168. Rosetta 2000: Expression in far1 (haploid) deletion mutant (1) 287 induced -0.149 0.117709111277072 -0.0175386575802837 169. Rosetta 2000: Expression in fks1 (haploid) deletion mutant (1) 288 induced 0.256 0.112834204630321 0.0288855563853622 170. Rosetta 2000: Expression in fpr1 deletion mutant (1) 289 induced 0.458 0.114643857356236 0.0525068866691561 173. Rosetta 2000: Expression in fus3 (haploid) deletion mutant (1) 292 induced 0.233 0.138824682598954 0.0323461510455563 175. Rosetta 2000: Expression in gal83 deletion mutant (1) 294 repressed -0.073 0.122482729648992 0.00894123926437642 176. Rosetta 2000: Expression in gas1 deletion mutant (1) 295 induced 0.392 0.11359503360717 0.0445292531740106 180. Rosetta 2000: Expression in gpa2 deletion mutant (1) 299 induced -0.046 0.138182412247946 -0.00635639096340552 187. Rosetta 2000: Expression in his1 deletion mutant (1) 306 induced -0.017 0.101103435399552 -0.00171875840179238 188. Rosetta 2000: Expression in hmg1(haploid) deletion mutant (1) 307 repressed 0.16 0.123351848394324 -0.0197362957430918 192. Rosetta 2000: Expression in hst3 deletion mutant (1) 311 induced -0.385 0.0999911314413742 -0.0384965856049291 195. Rosetta 2000: Expression in isw1 deletion mutant (1) 314 induced -0.023 0.140125560119492 -0.00322288788274832 196. Rosetta 2000: Expression in isw1, isw2 deletion mutant (1) 315 induced -0.12 0.118658047050037 -0.0142389656460044 199. Rosetta 2000: Expression in kim4 deletion mutant (1) 318 induced -0.176 0.128003640776699 -0.022528640776699 200. Rosetta 2000: Expression in kin3 deletion mutant (1) 319 induced -0.043 0.115799570575056 -0.00497938153472741 202. Rosetta 2000: Expression in kss1 (haploid) deletion mutant (1) 321 repressed -0.02 0.105571321882002 0.00211142643764004 207. Rosetta 2000: Expression in med2 (haploid) deletion mutant (1) 326 repressed -0.708 0.126498786407767 0.089561140776699 212. Rosetta 2000: Expression in npr2 deletion mutant (1) 331 repressed 0.103 0.107534540702016 -0.0110760576923076 214. Rosetta 2000: Expression in nta1 deletion mutant (1) 333 induced 0.256 0.0996149178491411 0.0255014189693801 220. Rosetta 2000: Expression in pep12 deletion mutant (1) 339 induced -0.017 0.145260922330097 -0.00246943567961165 224. Rosetta 2000: Expression in pex12 deletion mutant (1) 343 repressed 0.06 0.113333177744586 -0.00679999066467516 229. Rosetta 2000: Expression in qcr2 (haploid) deletion mutant (1) 348 induced 0.731 0.128204350261389 0.0937173800410754 237. Rosetta 2000: Expression in rip1 deletion mutant (1) 356 induced 0.548 0.102254947722181 0.0560357113517552 240. Rosetta 2000: Expression in rnr1 (haploid **9) deletion mutant (1) 359 induced 0.14 0.0989899178491412 0.0138585884988798 241. Rosetta 2000: Expression in rpd3 (haploid) deletion mutant (1) 360 repressed 0.89 0.103450336071695 -0.0920707991038086 244. Rosetta 2000: Expression in rpl27a (**4) deletion mutant (1) 363 repressed 0.329 0.0971746639283047 -0.0319704644324122 248. Rosetta 2000: Expression in rps24a (**9) deletion mutant (1) 367 repressed 0.083 0.101213125466766 -0.00840068941374158 249. Rosetta 2000: Expression in rps24a (haploid) deletion mutant (1) 368 repressed 0.246 0.119892643764003 -0.0294935903659447 250. Rosetta 2000: Expression in rps27b (**11) deletion mutant (1) 369 repressed 0.166 0.163925970873786 -0.0272117111650485 252. Rosetta 2000: Expression in rtg1 deletion mutant (1) 371 induced 0.133 0.177511202389843 0.0236089899178491 253. Rosetta 2000: Expression in rts1 deletion mutant (1) 372 induced 0.193 0.139919716206124 0.0270045052277819 254. Rosetta 2000: Expression in rvs161 (haploid) deletion mutant (1) 373 induced 0.076 0.152126120238984 0.0115615851381628 257. Rosetta 2000: Expression in sap30 deletion mutant (1) 376 induced 0.153 0.0991322815533981 0.0151672390776699 259. Rosetta 2000: Expression in sbp1 deletion mutant (1) 378 induced -0.169 0.177032766990291 -0.0299185376213592 260. Rosetta 2000: Expression in scs7 deletion mutant (1) 379 induced 0.239 0.142543409260642 0.0340678748132934 263. Rosetta 2000: Expression in she4 deletion mutant (1) 382 induced 0.634 0.134814227035101 0.085472219940254 268. Rosetta 2000: Expression in sir4 deletion mutant (1) 387 repressed 0.179 0.168481142643764 -0.0301581245332338 271. Rosetta 2000: Expression in ssn6 (haploid) deletion mutant (1) 390 induced -0.093 0.132999439880508 -0.0123689479088872 279. Rosetta 2000: Expression in ste24 (haploid) deletion mutant (1) 398 repressed 0.013 0.136280339805825 -0.00177164441747572 285. Rosetta 2000: Expression in swi6 (haploid) deletion mutant (1) 404 induced 0.538 0.150407020164302 0.0809189768483945 286. Rosetta 2000: Expression in tec1 (haploid) deletion mutant (1) 405 induced 0.219 0.110489637789395 0.0241972306758775 290. Rosetta 2000: Expression in tup1 (haploid) deletion mutant (1) 409 induced 0.186 0.173714525765497 0.0323109017923824 295. Rosetta 2000: Expression in vac8 deletion mutant (1) 414 induced 0.209 0.147450989544436 0.0308172568147871 298. Rosetta 2000: Expression in vps8 deletion mutant (1) 417 induced -0.116 0.132157393577297 -0.0153302576549665 305. Rosetta 2000: Expression in yar014c deletion mutant (1) 424 induced -0.1 0.102868278566094 -0.0102868278566094 309. Rosetta 2000: Expression in yel008w deletion mutant (1) 428 repressed -0.226 0.0956917475728155 0.0216263349514563 310. Rosetta 2000: Expression in yel010w deletion mutant (1) 429 repressed 0.017 0.110527912621359 -0.0018789745145631 312. Rosetta 2000: Expression in yel028w deletion mutant (1) 431 repressed 0.013 0.102548076923077 -0.001333125 313. Rosetta 2000: Expression in yel033w deletion mutant (1) 432 repressed 0.691 0.104386669156087 -0.0721311883868561 314. Rosetta 2000: Expression in yel044w deletion mutant (1) 433 induced 0.286 0.123265963405527 0.0352540655339807 320. Rosetta 2000: Expression in yer030w deletion mutant (1) 439 repressed -0.146 0.114002987303958 0.0166444361463779 325. Rosetta 2000: Expression in yer050c deletion mutant (1) 444 induced 0.585 0.121972087378641 0.071353671116505 332. Rosetta 2000: Expression in cells with CMD1 under tet promoter(1) 451 induced 0.106 0.146359690067214 0.0155141271471247 338. Rosetta 2000: Expression in yhr022c deletion mutant (1) 457 induced -0.007 0.103440533980583 -0.000724083737864081 339. Rosetta 2000: Expression in yhr031c deletion mutant (1) 458 induced 0.007 0.162936893203883 0.00114055825242718 340. Rosetta 2000: Expression in yhr034c deletion mutant (1) 459 repressed -0.063 0.107672703510082 0.00678338032113517 353. Rosetta 2000: Expression in ymr014w deletion mutant (1) 472 repressed 0.462 0.0985530246452577 -0.0455314973861091 354. Rosetta 2000: Expression in ymr025w deletion mutant (1) 473 induced 0 0.103387322628827 0 368. Rosetta 2000: Expression in ymr237w deletion mutant (1) 487 repressed 0.023 0.100448095593727 -0.00231030619865572 373. Rosetta 2000: Expression in ymr293c deletion mutant (1) 492 induced 0.535 0.109860903659447 0.0587755834578042 375. Rosetta 2000: Expression in yor006c deletion mutant (1) 494 repressed 0.156 0.10813713592233 -0.0168693932038835 379. Rosetta 2000: Expression in yor051c (**14) deletion mutant (1) 498 repressed 0.093 0.103404592979836 -0.00961662714712475 381. Rosetta 2000: Expression in yor078w deletion mutant (1) 500 repressed 0.272 0.115207244212099 -0.0313363704256909 382. Rosetta 2000: Expression in yor080w (**3) deletion mutant (1) 501 induced 0.036 0.137701643017177 0.00495725914861837 386. Rosetta 2000: Expression in cells with CDC42 under tet promoter(1) 505 induced 0.023 0.102454723674384 0.00235645864451083 387. Rosetta 2000: Expression in cells with ERG11 under tet promoter(1) 506 induced 1.156 0.102403379387603 0.118378306572069 388. Rosetta 2000: Expression in cells with FKS1 under tet promoter(1) 507 induced 0.309 0.16036641150112 0.0495532211538461 391. Rosetta 2000: Expression in cells with KAR2 under tet promoter(1) 510 induced 0.545 0.0995379014189694 0.0542481562733383 392. Rosetta 2000: Expression in cells with PMA1 under tet promoter(1) 511 induced -0.256 0.103232356235997 -0.0264274831964152 394. Rosetta 2000: Expression in cells with YEF3 under tet promoter(1) 513 repressed 0.033 0.121607076176251 -0.00401303351381628 395. Rosetta 2000: Expression in response to 2-deoxy-D-glucose(1) 514 induced 0.953 0.108174943988051 0.103090721620613 397. Rosetta 2000: Expression in response to Cycloheximide white(1) 516 repressed -0.03 0.10841859596714 0.0032525578790142 398. Rosetta 2000: Expression in response to Doxycycline(1) 517 induced 0.133 0.124926250933532 0.0166151913741598 399. Rosetta 2000: Expression in response to FR901,228(1) 518 repressed 0.057 0.0957038834951456 -0.0054551213592233 400. Rosetta 2000: Expression in response to Glucosamine(1) 519 induced 0.389 0.104313853622106 0.0405780890589992 401. Rosetta 2000: Expression in response to HU(1) 520 induced 0.236 0.158353715459298 0.0373714768483943 402. Rosetta 2000: Expression in response to Itraconazole(1) 521 induced 0.581 0.119648991784914 0.069516064227035 403. Rosetta 2000: Expression in response to Lovastatin(1) 522 induced 0.09 0.114090272591486 0.0102681245332337 404. Rosetta 2000: Expression in response to MMS(1) 523 induced 0.309 0.124625653472741 0.038509326923077 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(1) 527 induced 0.09 0.15084858103062 0.0135763722927558 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,210(4) 530 repressed 0.1 0.129007188200149 -0.0129007188200149 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(1) 540 induced 0.12 0.128946508588499 0.0154735810306199 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(3) 542 repressed -0.2 0.0971270537714713 0.0194254107542943 Expression during the cell cycle in fkh1 fkh2 mutant (alpha factor arrest and release): 0,5,30,45,60,75,90,105,120,135,150,165,180(5) 544 repressed -0.56 0.103597367438387 0.0580145257654967 Expression in PDR1-3 mutant(1) 555 repressed -0.252 0.0994174757281553 0.0250532038834951 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(2) 572 induced 0.554 0.117975168035848 0.0653582430918598 Meiosis in W303 a alpha cells: 2h,4h,6h,8h,10h,12h(6) 576 induced 0.236 0.0972288088125467 0.022945998879761 Low-Pi vs High-Pi in WT (NBW7) exp1(1) 577 induced 0.227 0.14408140403286 0.0327064787154592 Low-Pi vs High-Pi in WT (DBY7286)(1) 579 induced 0.433 0.134710138162808 0.0583294898244959 PHO81c vs WT exp2(1) 584 induced 0.014 0.100037808065721 0.00140052931292009 428. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 585 induced -0.773 0.147698842419716 -0.11417120519044 430. Expression in strain PM38 (wild type), glucose versus ethanol: strain was shifted from medium containing dextrose as carbon source, ammonium sulfate as nirogen source, supplemented with leucine and uracil to same medium for 30 min, compared to a shift to a medium with synthetic ethanol instead of glucose for 30 min(1) 587 induced -0.166 0.18173356982823 -0.0301677725914862 431. Expression in strain PM71 (gln3 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 588 induced -0.304 0.166506254667662 -0.0506179014189692 432. Expression in strain MS221 in response to 30 min 50 nM treatment with rapamycin in YPD(1) 589 induced -0.767 0.123956310679612 -0.0950744902912624 433. Expression in strain PH2 (ure2 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 590 induced 0 0.119050597460792 0 434. Expression in strain P40-1A (gln3 ure2 double deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 591 induced -0.192 0.145771564600448 -0.027988140403286 439. Expression in strain Jk9-3da (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 596 induced -0.992 0.155394417475728 -0.154151262135922 440. Expression in strain TS19-4c in response to 30 min 50 nM treatment with rapamycin in YPD(1) 597 induced -0.578 0.129216299477222 -0.0746870210978343 441. Expression in wild type versus strain TS19-4c under steady state conditions in YPD(1) 598 induced 0.643 0.167037901418969 0.107405370612397 442. Expression in strain PM38 (wild type) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 599 induced -0.627 0.109475354742345 -0.0686410474234503 443. Expression in strain YHE710 (mks1 deletion) in response to 30 min 50 nM treatment with rapamycin in YPD(1) 600 induced -0.42 0.115091486183719 -0.048338424197162 452. Expression in response to low 4NQO (2 microgram/ml) for 60 min(1) 609 induced 0.025 0.108803211351755 0.00272008028379388 454. Expression in response to tBuOOH (5mM) for 60 min(1) 611 induced 0.614 0.109409073935773 0.0671771713965646 458. Expression of S arrested cells (with hydroxyurea) in response to 0.1% MMS for 60 min(1) 615 repressed 0.175 0.0983695855115758 -0.0172146774645258 460. Expression of stationary phase cells in response to 0.1% MMS for 60 min(1) 617 repressed -1.022 0.117100448095594 0.119676657953697 465. Expression in rpd3 deletion(1) 622 induced 0.723 0.102378640776699 0.0740197572815534 469. Expression in hda1 deletion(1) 626 induced 0.077 0.112694641523525 0.00867748739731142 477. Expression in response to trichostatin A (TSA): 15min,30min,60min,120min(1) 634 induced -0.009 0.110712752053771 -0.000996414768483939 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(3) 640 induced 3.99 0.100112957430919 0.399450700149367 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(4) 641 induced 1.035 0.10130927931292 0.104855104088872 478. Expression in haploid cells in response to rapamycin (100nM) for: 0min,15min,30min,60min,120min(5) 642 induced -2.178 0.100380414488424 -0.218628542755787 481. Expression in response to heat shock: 15,30,45,60,120 min(1) 652 induced 0.696 0.139240571321882 0.0969114376400299 482. Expression in response to acid: 10,20,40,60,80,100 min(1) 657 induced -0.344 0.146353622106049 -0.0503456460044808 482. Expression in response to acid: 10,20,40,60,80,100 min(2) 658 induced 0.329 0.174099141150112 0.0572786174383868 482. Expression in response to acid: 10,20,40,60,80,100 min(3) 659 induced 0.004 0.121623412994772 0.000486493651979088 482. Expression in response to acid: 10,20,40,60,80,100 min(4) 660 induced 0.414 0.104126213592233 0.0431082524271845 482. Expression in response to acid: 10,20,40,60,80,100 min(5) 661 induced 1.156 0.115030339805825 0.132975072815534 483. Expression in response to alkali: 10,20,40,60,80,100 min(1) 663 induced -0.248 0.132502800597461 -0.0328606945481703 483. Expression in response to alkali: 10,20,40,60,80,100 min(2) 664 induced -0.25 0.11655573188947 -0.0291389329723675 483. Expression in response to alkali: 10,20,40,60,80,100 min(3) 665 induced 0.377 0.0976250933532487 0.0368046601941748 483. Expression in response to alkali: 10,20,40,60,80,100 min(4) 666 induced -0.416 0.116817587752054 -0.0485961165048545 483. Expression in response to alkali: 10,20,40,60,80,100 min(6) 668 induced -0.042 0.0963648244958925 -0.00404732262882748 485. Expression in response to peroxide: 10,20,40,60,120 min(2) 672 induced -0.338 0.122468259895444 -0.0413942718446601 485. Expression in response to peroxide: 10,20,40,60,120 min(3) 673 induced -0.164 0.113747666168783 -0.0186546172516804 485. Expression in response to peroxide: 10,20,40,60,120 min(4) 674 induced 0.144 0.10505787901419 0.0151283345780434 485. Expression in response to peroxide: 10,20,40,60,120 min(5) 675 induced -0.023 0.100994212098581 -0.00232286687826736 486. Expression in response to NaCl: 15 30 45 60 120 min(2) 677 induced 0.671 0.171801717699776 0.11527895257655 486. Expression in response to NaCl: 15 30 45 60 120 min(3) 678 induced 0.873 0.188600168035848 0.164647946695295 486. Expression in response to NaCl: 15 30 45 60 120 min(4) 679 induced 0.398 0.182277352501867 0.0725463862957431 486. Expression in response to NaCl: 15 30 45 60 120 min(5) 680 induced -0.369 0.188963312173264 -0.0697274621919344 487. Expression in response to sorbitol: 15 30 45 90 120 min(1) 681 induced -0.406 0.159968726661688 -0.0649473030246453 487. Expression in response to sorbitol: 15 30 45 90 120 min(2) 682 induced 0.952 0.182087378640777 0.17334718446602 487. Expression in response to sorbitol: 15 30 45 90 120 min(3) 683 induced 1.028 0.150704817027633 0.154924551904407 487. Expression in response to sorbitol: 15 30 45 90 120 min(5) 685 induced 0.192 0.101535660941001 0.0194948469006722 488. Brown enviromental changes :Heat Shock 05 minutes hs-1(1) 686 induced -0.22 0.190568988050784 -0.0419251773711725 489. Brown enviromental changes :Heat Shock 10 minutes hs-1(1) 687 induced -0.84 0.190228715459298 -0.15979212098581 490. Brown enviromental changes :Heat Shock 15 minutes hs-1(1) 688 induced 0 0.205078416728902 0 491. Brown enviromental changes :Heat Shock 20 minutes hs-1(1) 689 induced 0.31 0.204258775205377 0.0633202203136669 492. Brown enviromental changes :Heat Shock 30 minutes hs-1(1) 690 induced -0.1 0.205238517550411 -0.0205238517550411 493. Brown enviromental changes :Heat Shock 40 minutes hs-1(1) 691 induced -0.45 0.174932318894698 -0.0787195435026141 494. Brown enviromental changes :Heat Shock 60 minutes hs-1(1) 692 induced -0.04 0.141235530246453 -0.00564942120985812 495. Brown enviromental changes :Heat Shock 80 minutes hs-1(1) 693 induced -0.94 0.159226568334578 -0.149672974234503 496. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 694 repressed -0.09 0.185274458551158 0.0166747012696042 497. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 695 repressed 0.01 0.188195948469007 -0.00188195948469007 498. Brown enviromental changes :Heat Shock 000 minutes hs-2(1) 696 repressed 0.08 0.198235623599701 -0.0158588498879761 500. Brown enviromental changes :Heat Shock 015 minutes hs-2(1) 698 induced 0.71 0.165634802091113 0.11760070948469 501. Brown enviromental changes :Heat Shock 030inutes hs-2(1) 699 induced 0.43 0.102561613144137 0.0441014936519789 502. Brown enviromental changes :Heat Shock 060 minutes hs-2(1) 700 repressed -0.14 0.146910474234503 0.0205674663928304 504. Brown enviromental changes :37C to 25C shock - 30 min(1) 702 repressed 0.38 0.104826829723674 -0.0398341952949961 505. Brown enviromental changes :37C to 25C shock - 45 min(1) 703 repressed 0.24 0.101233663181479 -0.024296079163555 507. Brown enviromental changes :37C to 25C shock - 90 min(1) 705 repressed -0.3 0.111964619118745 0.0335893857356235 508. Brown enviromental changes :heat shock 17 to 37, 20 minutes(1) 706 induced 0.14 0.216582337565347 0.0303215272591486 509. Brown enviromental changes :heat shock 21 to 37, 20 minutes(1) 707 induced 0.16 0.205189507094847 0.0328303211351755 510. Brown enviromental changes :heat shock 25 to 37, 20 minutes(1) 708 induced 0.16 0.203758868558626 0.0326014189693802 511. Brown enviromental changes :heat shock 29 to 37, 20 minutes(1) 709 induced 0.96 0.186700896191187 0.17923286034354 512. Brown enviromental changes :heat shock 33 to 37, 20 minutes(1) 710 induced 0.86 0.191665888722928 0.164832664301718 513. Brown enviromental changes :29C to 33C - 5 minutes(1) 711 induced 0.43 0.0962140589992532 0.0413720453696789 514. Brown enviromental changes :29C to 33C - 15 minutes(1) 712 induced 0.25 0.202341766243465 0.0505854415608663 517. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 5 minutes(1) 715 induced 0.28 0.199176157580284 0.0557693241224795 518. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 15 minutes(1) 716 induced 1.03 0.163339712471994 0.168239903846154 519. Brown enviromental changes :29C +1M sorbitol to 33C + 1M sorbitol - 30 minutes(1) 717 repressed 0.58 0.118633775205377 -0.0688075896191187 520. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 5 minutes(1) 718 induced 0.78 0.147307225541449 0.11489963592233 521. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 15 minutes(1) 719 induced 1.4 0.138501213592233 0.193901699029126 522. Brown enviromental changes :29C +1M sorbitol to 33C + *NO sorbitol - 30 minutes(1) 720 repressed 1.21 0.117486930545183 -0.142159185959671 525. Brown enviromental changes :constant 0.32 mM H2O2 (30 min) redo(1) 723 induced -0.45 0.119335791635549 -0.0537011062359971 527. Brown enviromental changes :constant 0.32 mM H2O2 (50 min) redo(1) 725 induced 0 0.151130041075429 0 528. Brown enviromental changes :constant 0.32 mM H2O2 (60 min) redo(1) 726 induced 0.16 0.143695388349515 0.0229912621359224 529. Brown enviromental changes :constant 0.32 mM H2O2 (80 min) redo(1) 727 induced 0.19 0.134997666168783 0.0256495565720688 530. Brown enviromental changes :constant 0.32 mM H2O2 (100 min) redo(1) 728 induced 0.51 0.136417569081404 0.069572960231516 531. Brown enviromental changes :constant 0.32 mM H2O2 (120 min) redo(1) 729 induced 0.15 0.0990580657206871 0.0148587098581031 532. Brown enviromental changes :constant 0.32 mM H2O2 (160 min) redo(1) 730 induced 0.4 0.115506908140403 0.0462027632561612 539. Brown enviromental changes :1 mM Menadione (105 min) redo(1) 737 induced -0.18 0.116856329350261 -0.021034139283047 540. Brown enviromental changes :1 mM Menadione (120 min)redo(1) 738 induced 0.06 0.124950522778193 0.00749703136669158 546. Brown enviromental changes :2.5mM DTT 060 min dtt-1(1) 744 induced -0.45 0.0999071135175504 -0.0449582010828977 548. Brown enviromental changes :2.5mM DTT 120 min dtt-1(1) 746 induced -0.54 0.0991112770724421 -0.0535200896191187 549. Brown enviromental changes :2.5mM DTT 180 min dtt-1(1) 747 induced 0 0.112018764002987 0 550. Brown enviromental changes :dtt 000 min dtt-2(1) 748 bimodal -0.25 0.105610530246453 -0.0264026325616133 551. Brown enviromental changes :dtt 015 min dtt-2(1) 749 repressed -0.07 0.138821882001494 0.00971753174010458 552. Brown enviromental changes :dtt 030 min dtt-2(1) 750 repressed -0.36 0.112689040328603 0.0405680545182971 554. Brown enviromental changes :dtt 120 min dtt-2(1) 752 induced 0.19 0.110699215832711 0.0210328510082151 555. Brown enviromental changes :dtt 240 min dtt-2(1) 753 induced 0.56 0.185514376400299 0.103888050784167 556. Brown enviromental changes :dtt 480 min dtt-2(1) 754 induced -0.03 0.114754947722181 -0.00344264843166543 557. Brown enviromental changes :1.5 mM diamide (5 min)(1) 755 induced -0.3 0.122603622106049 -0.0367810866318147 558. Brown enviromental changes :1.5 mM diamide (10 min)(1) 756 induced -0.62 0.159663461538462 -0.0989913461538464 559. Brown enviromental changes :1.5 mM diamide (20 min)(1) 757 induced -0.36 0.186915141896938 -0.0672894510828977 560. Brown enviromental changes :1.5 mM diamide (30 min)(1) 758 induced -0.36 0.170543315907394 -0.0613955937266618 561. Brown enviromental changes :1.5 mM diamide (40 min)(1) 759 induced -0.36 0.167812733383122 -0.0604125840179239 562. Brown enviromental changes :1.5 mM diamide (50 min)(1) 760 induced -0.4 0.142847274085138 -0.0571389096340552 563. Brown enviromental changes :1.5 mM diamide (60 min)(1) 761 induced 0.21 0.11755787901419 0.0246871545929799 564. Brown enviromental changes :1.5 mM diamide (90 min)(1) 762 induced -0.22 0.0974010455563854 -0.0214282300224048 565. Brown enviromental changes :1M sorbitol - 5 min(1) 763 induced 0 0.156980955937267 0 566. Brown enviromental changes :1M sorbitol - 15 min(1) 764 induced 0.31 0.196073095593727 0.0607826596340554 567. Brown enviromental changes :1M sorbitol - 30 min(1) 765 induced 0 0.18149925317401 0 568. Brown enviromental changes :1M sorbitol - 45 min (1) 766 induced -0.22 0.206396097834205 -0.0454071415235251 570. Brown enviromental changes :1M sorbitol - 90 min(1) 768 induced -0.15 0.11428071321882 -0.017142106982823 571. Brown enviromental changes :1M sorbitol - 120 min(1) 769 induced -0.1 0.118011109036594 -0.0118011109036594 573. Brown enviromental changes :Hypo-osmotic shock - 15 min(1) 771 repressed 0.66 0.147075242718447 -0.097069660194175 574. Brown enviromental changes :Hypo-osmotic shock - 30 min(1) 772 repressed 0.41 0.109271377893951 -0.0448012649365199 575. Brown enviromental changes :Hypo-osmotic shock - 45 min(1) 773 repressed 0.5 0.117844473487677 -0.0589222367438385 576. Brown enviromental changes :Hypo-osmotic shock - 60 min(1) 774 repressed 0.12 0.118637976101568 -0.0142365571321882 578. Brown enviromental changes :aa starv 0.5 h(1) 776 induced 0.39 0.134545836445108 0.0524728762135921 580. Brown enviromental changes :aa starv 2 h(1) 778 induced 0.46 0.10636715832711 0.0489288928304706 582. Brown enviromental changes :aa starv 6 h(1) 780 induced 0.49 0.111393297236744 0.0545827156460046 583. Brown enviromental changes :Nitrogen Depletion 30 min.(1) 781 induced 0.31 0.116339619118745 0.036065281926811 584. Brown enviromental changes :Nitrogen Depletion 1 h(1) 782 induced -0.29 0.115616131441374 -0.0335286781179985 586. Brown enviromental changes :Nitrogen Depletion 4 h(1) 784 repressed -0.01 0.103541355489171 0.00103541355489171 587. Brown enviromental changes :Nitrogen Depletion 8 h(1) 785 induced 1.16 0.151741504854369 0.176020145631068 588. Brown enviromental changes :Nitrogen Depletion 12 h(1) 786 induced 1.58 0.185683812546677 0.29338042382375 589. Brown enviromental changes :Nitrogen Depletion 1 d(1) 787 induced 2.06 0.182684839432412 0.376330769230769 590. Brown enviromental changes :Nitrogen Depletion 2 d(1) 788 induced 1.76 0.162153192681105 0.285389619118745 591. Brown enviromental changes :Nitrogen Depletion 3 d(1) 789 induced 1.98 0.140512509335325 0.278214768483944 592. Brown enviromental changes :Nitrogen Depletion 5 d(1) 790 induced 1.69 0.145283327109783 0.245528822815533 603. Brown enviromental changes :YPD 6 h ypd-2(1) 794 induced 0.96 0.187534073935773 0.180032710978342 604. Brown enviromental changes :YPD 8 h ypd-2(1) 795 induced 0.42 0.151947815533981 0.063818082524272 605. Brown enviromental changes :YPD 10 h ypd-2(1) 796 induced 0.58 0.155925597460792 0.0904368465272593 606. Brown enviromental changes :YPD 12 h ypd-2(1) 797 induced 1.14 0.19271284540702 0.219692643764003 607. Brown enviromental changes :YPD 1 d ypd-2(1) 798 induced 1.4 0.200902259148618 0.281263162808065 608. Brown enviromental changes :YPD 2 d ypd-2(1) 799 induced 1.73 0.159667195668409 0.276224248506348 609. Brown enviromental changes :YPD 3 d ypd-2(1) 800 induced 1.87 0.156991224794623 0.293573590365945 610. Brown enviromental changes :YPD 5 d ypd-2(1) 801 induced 0.81 0.145178771471247 0.11759480489171 612. Brown enviromental changes :YPD stationary phase 4 h ypd-1(1) 803 induced 0.11 0.103802277819268 0.0114182505601195 613. Brown enviromental changes :YPD stationary phase 8 h ypd-1(1) 804 induced -0.14 0.158738330843913 -0.0222233663181478 614. Brown enviromental changes :YPD stationary phase 12 h ypd-1(1) 805 induced 0.62 0.172269417475728 0.106807038834951 615. Brown enviromental changes :YPD stationary phase 1 d ypd-1(1) 806 induced 0.63 0.186193521284541 0.117301918409261 616. Brown enviromental changes :YPD stationary phase 2 d ypd-1(1) 807 induced 1.51 0.227694641523525 0.343818908700523 617. Brown enviromental changes :YPD stationary phase 3 d ypd-1(1) 808 induced 2.06 0.228287901418969 0.470273076923076 618. Brown enviromental changes :YPD stationary phase 5 d ypd-1(1) 809 induced 0.85 0.16618932038835 0.141260922330097 619. Brown enviromental changes :YPD stationary phase 7 d ypd-1(1) 810 induced 1.18 0.171951082897685 0.202902277819268 620. Brown enviromental changes :YPD stationary phase 13 d ypd-1(1) 811 induced 0.72 0.170421023151606 0.122703136669156 621. Brown enviromental changes :YPD stationary phase 22 d ypd-1(1) 812 induced 1.42 0.154484690067214 0.219368259895444 622. Brown enviromental changes :YPD stationary phase 28 d ypd-1(1) 813 induced 1.47 0.160412621359223 0.235806553398058 623. Brown enviromental changes :DBY7286 37degree heat - 20 min(1) 814 induced 0.38 0.204003920836445 0.0775214899178491 624. Brown enviromental changes :DBYmsn2-4- 37degree heat - 20 min(1) 815 induced 0.16 0.100852315160568 0.0161363704256909 626. Brown enviromental changes :DBYyap1- 37degree heat - 20 min (redo)(1) 817 induced 0.36 0.179504761015683 0.0646217139656459 627. Brown enviromental changes :DBYyap1 + 37degree heat (repeat)(1) 818 induced 0.86 0.164754947722181 0.141689255041076 628. Brown enviromental changes :DBY7286 + 0.3 mM H2O2 (20 min)(1) 819 induced 0.18 0.10855069081404 0.0195391243465272 631. Brown enviromental changes :DBYyap1- + 0.3 mM H2O2 (20 min)(1) 822 induced 0.32 0.163027445855116 0.0521687826736371 632. Brown enviromental changes :DBYyap1 + 0.32 mM H2O2 (20 min)(1) 823 induced 0.88 0.176257935026139 0.155106982823002 633. Brown enviromental changes :MSN2 overexpression (repeat)(1) 824 induced 0.3 0.146658887229276 0.0439976661687828 634. Brown enviromental changes :MSN4 overexpression(1) 825 induced -0.18 0.154278846153846 -0.0277701923076923 636. Brown enviromental changes :ethanol car-1(1) 827 induced 0.38 0.104520631067961 0.0397178398058252 637. Brown enviromental changes :galactose car-1(1) 828 induced -0.36 0.110054144884242 -0.0396194921583271 638. Brown enviromental changes :glucose car-1(1) 829 repressed 0.55 0.106587938760269 -0.0586233663181479 640. Brown enviromental changes :raffinose car-1(1) 831 repressed 0.37 0.111810586258402 -0.0413699169156087 641. Brown enviromental changes :sucrose car-1(1) 832 repressed 0.46 0.112059839432412 -0.0515475261389095 642. Brown enviromental changes :YP ethanol vs reference pool car-2(1) 833 induced 0.36 0.137924757281553 0.0496529126213591 643. Brown enviromental changes :YP fructose vs reference pool car-2(1) 834 repressed 0.46 0.11965786034354 -0.0550426157580284 644. Brown enviromental changes :YP galactose vs reference pool car-2(1) 835 induced -0.15 0.11054144884242 -0.016581217326363 645. Brown enviromental changes :YP glucose vs reference pool car-2(1) 836 repressed -0.3 0.119993932038835 0.0359981796116505 648. Brown enviromental changes :YP sucrose vs reference pool car-2(1) 839 repressed 0.08 0.131016616878267 -0.0104813293502614 653. Brown enviromental changes :37 deg growth ct-1(1) 844 induced 0.01 0.107661501120239 0.00107661501120239 654. Brown enviromental changes :steady state 15 dec C ct-2(1) 845 induced 0.38 0.107151792382375 0.0407176811053025 656. Brown enviromental changes :steady state 21 dec C ct-2(1) 847 repressed 0.08 0.114570575056012 -0.00916564600448096 657. Brown enviromental changes :steady state 25 dec C ct-2(1) 848 repressed 0.19 0.123036314413742 -0.023376899738611 658. Brown enviromental changes :steady state 29 dec C ct-2(1) 849 repressed 0.03 0.110583457804332 -0.00331750373412996 660. Brown enviromental changes :steady state 36 dec C ct-2(1) 851 induced -0.12 0.0988265496639283 -0.0118591859596714 669. Expression in Rho0 containing rtg3 deletion vs Rho0(1) 857 induced 0 0.110344006721434 0 672. Expression in response to carbonyl cyanide m-chlorophenylhydrazone (CCCP) 90min(1) 860 induced 0 0.0993581964152352 0 677. Expression in gcr1 mutant YPGL+glucose versus GCR1 YPGL+glucose(1) 865 induced 1.022 0.177994772218073 0.181910657206871 679. Expression in GCR1 YPGL+glucose versus GCR1 YPGL(1) 867 repressed -0.623 0.178240758028379 0.11104399225168 680. Expression in GCR1 YPD versus GCR1 YPGL(1) 868 bimodal -0.918 0.162863144137416 -0.149508366318148 (Rich Media 2% Glucose YPD-185588) wt 5mM aF, 30 min. 875 induced 0.38 0.102745052277819 0.0390431198655712 (Rich Media 2% Glucose YPD-185769) wt 5mM aF, 30 min. 876 induced 0.56 0.108981982823002 0.0610299103808811 (Rich Media 2% Glucose YPD-185009) kss1 5mM aF, 30 min. 883 induced -0.21 0.112785660941001 -0.0236849887976102 Addition of 1M NaCl (90) 917 induced 1.88 0.152771657953697 0.28721071695295 Addition of .5M NaCl in gpd1gpd2 deletion mutant (60) 918 induced -0.013 0.135230582524272 -0.00175799757281554 DES460 + 0.02% MMS - 60 min 923 induced 0 0.113627707244212 0 DES460 + 0.02% MMS - 90 min 924 induced 0 0.129502893950709 0 DES460 + 0.02% MMS - 120 min 925 induced 0 0.113904499626587 0 DES459 (mec1-) + 0.02% MMS - 45 min 929 repressed -0.248 0.0977842606422703 0.024250496639283 wt_plus_gamma_5_min 936 induced -0.236 0.156370425690814 -0.0369034204630321 wt_plus_gamma_10_min 937 induced 0.1 0.189131348020911 0.0189131348020911 wt_plus_gamma_20_min 938 induced 0 0.131087098581031 0 wt_plus_gamma_30_min 939 induced 0.022 0.120525112023898 0.00265155246452576 wt_plus_gamma_45_min 940 induced 0.524 0.117651699029126 0.061649490291262 wt_plus_gamma_90_min 942 induced 0.186 0.098380787901419 0.0182988265496639 DES460 (wt) - mock irradiation - 5 min 944 induced -0.028 0.171988424197162 -0.00481567587752054 mec1_plus_gamma_5_min 948 induced 0.004 0.177956030619866 0.000711824122479464 mec1_plus_gamma_10_min 949 induced 0.233 0.140652539208364 0.0327720416355488 mec1_plus_gamma_20_min 950 repressed 0.023 0.118990384615385 -0.00273677884615385 mec1_plus_gamma_30_min 951 repressed -0.117 0.129938386855863 0.015202791262136 mec1_plus_gamma_60_min 953 repressed -0.143 0.116585604929052 0.0166717415048544 mec1_plus_gamma_90_min 954 repressed -0.105 0.0997628827483196 0.0104751026885736 DES459 (mec1) - mock irradiation - 5 min 956 induced -0.357 0.133251493651979 -0.0475707832337565 DES460 (wild type) + heat 20 min 960 induced 0.85 0.167527539208364 0.142398408327109 DES459 (mec1) + heat 20 min 961 induced 0.524 0.19622572815534 0.102822281553398 MHY1 (dun1) + heat 20 min 962 induced 0.575 0.177079443614638 0.101820680078417 DES460 + 0.02% MMS - 5 min 966 repressed 0.441 0.106501120238984 -0.0469669940253919 gal1+gal 975 repressed 0.292 0.157729182225541 -0.046056921209858 gal4+gal 978 induced -0.462 0.115734690067214 -0.0534694268110529 gal6+gal 980 induced -0.189 0.117955563853622 -0.0222936015683346 gal10+gal 982 induced 0.007 0.149719473487677 0.00104803631441374 gal2-gal 985 induced 0.831 0.121060959671397 0.100601657486931 gal3-gal 986 induced 0.382 0.14247572815534 0.0544257281553399 gal4-gal 987 induced -0.06 0.139620519044063 -0.00837723114264378 gal10-gal 991 induced 0.395 0.163303771471247 0.0645049897311426 gal1gal10+gal 993 repressed -0.12 0.121643950709485 0.0145972740851382 gal2gal80-gal 994 repressed 0.256 0.130889189693801 -0.0335076325616131 sfp1::GALSFP1 t=10min GAL vs. t=0 RAFF (YT00270) 1001 induced -0.01 0.113965646004481 -0.00113965646004481 YAL038W 1010 induced -0.15787 0.132529406273338 -0.0209224173683719 YBL020W 1013 induced 0.19018 0.116591672890217 0.0221734043502615 YBL040C 1014 induced 0.048662 0.0967914488424197 0.00471006548356983 YBL084C 1015 induced 0.1239 0.104772218073189 0.0129812778192681 YBR088C 1018 induced 0.15935 0.118210418222554 0.018836830143764 YBR142W 1019 induced 0.0802 0.130340272591486 0.0104532898618372 YBR143C 1020 induced -0.11036 0.10150998879761 -0.0112026423637042 YBR193C 1023 repressed -0.18538 0.131264936519791 0.0243338939320389 YCR013C 1028 induced -0.030026 0.127005227781927 -0.00381345896938014 YDL047W 1032 induced 0.030481 0.11946788648245 0.00364150064787156 YDL055C 1033 induced 0.34648 0.0974472554144884 0.0337635250560119 YDL064W 1035 induced 0.23433 0.119698935772965 0.0280490516196789 YDR047W 1039 induced -0.046199 0.135073749066468 -0.00624027213312175 YDR091C 1041 induced 0.05548 0.0981478715459298 0.00544524391336819 YDR141C 1042 induced 0.13222 0.121789581777446 0.0161030185026139 YDR489W 1047 induced 0.072769 0.171931011949216 0.0125112478085325 YER172C 1050 induced -0.029291 0.111984690067214 -0.00328014355675877 YFL005W 1051 induced 0.14521 0.118098861090366 0.017149135618932 YFL024C 1052 induced 0.056902 0.140523711725168 0.00799608024458551 YGR048W 1057 bimodal 0.18566 0.129777352501867 0.0240944632654966 YGR060W 1058 induced 0.092738 0.107072442120986 0.009929684137416 YGR280C 1064 induced -0.052605 0.110391150112024 -0.00580712645164302 YHR118C 1069 induced -0.02267 0.112521004480956 -0.00255085117158327 YIL106W 1073 induced -0.034183 0.112443521284541 -0.00384365688806947 YJL039C 1079 repressed 0.16333 0.113483009708738 -0.0185351799757282 YJL072C 1081 induced -0.086032 0.136215926064227 -0.0117189285511576 YJL081C 1082 induced 0.086104 0.172421116504854 0.014846147815534 YJL091C 1083 induced -0.017108 0.114293782673637 -0.00195533803398058 YJL194W 1084 induced -0.19743 0.107224607916355 -0.021169354340926 YJR002W 1085 repressed -0.042882 0.100898991784914 0.00432675056572068 YKL052C 1089 induced 0.11691 0.120690814040329 0.0141099630694549 YKR079C 1094 induced 0.095689 0.181161781179985 0.0173351896793316 YKR086W 1095 induced -0.0096031 0.131043689320388 -0.00125842565291262 YLL003W 1096 induced -0.022969 0.135822442120986 -0.00311970567307693 YLR060W 1100 repressed -0.05788 0.1029821695295 0.00596060797236746 YLR076C 1101 induced -0.11134 0.130610063480209 -0.0145421244678865 YLR086W 1102 induced 0.062435 0.160085884988798 0.0099949622292756 YLR101C 1103 induced 0.0033277 0.157248879761016 0.000523277097180733 YLR163C 1105 induced 0.18981 0.11399785287528 0.0216379324542569 YLR196W 1106 induced 0.17306 0.137681105302465 0.0238270920836446 YLR291C 1109 induced 0.19526 0.101965552651232 0.0199097938106796 YLR359W 1112 induced 0.075213 0.155353808812547 0.0116846260222181 YLR378C 1113 induced 0.28272 0.115332337565347 0.0326067584764749 YLR424W 1114 induced 0.021166 0.102695108289768 0.00217364466206123 YLR440C 1115 induced 0.26571 0.126809185959671 0.0336944688013442 YLR459W 1117 induced 0.17783 0.121914675130695 0.0216800866784915 YML031W 1118 induced 0.029183 0.169663461538462 0.00495128879807694 YML046W 1119 induced -0.029012 0.133125466766243 -0.00386223604182224 YML130C 1120 induced 0.34566 0.110147964899179 0.0380737455470502 YMR001C 1121 induced 0.035413 0.132200802837939 0.00468162703089993 YMR076C 1123 induced 0.057739 0.145062546676624 0.00837576638256159 YMR079W 1124 induced 0.38647 0.108221620612397 0.0418244097180731 YMR200W 1126 induced 0.044631 0.140340272591486 0.00626352670603061 YMR239C 1128 induced 0.040002 0.123472274085138 0.00493913790795369 YNL150W 1132 induced -0.06881 0.111974421209858 -0.00770495992345033 YNL158W 1133 induced 0.11087 0.114291915608663 0.0126715446835325 YNL182C 1134 induced 0.10508 0.115230115758028 0.0121083805638536 YNL272C 1136 induced 0.051248 0.1093642643764 0.00560469982076175 YNR035C 1138 induced 0.2467 0.118286034353996 0.0291811646751308 YNR043W 1139 induced 0.074663 0.108412994772218 0.00809443942867811 YNR053C 1140 induced 0.053052 0.102724514563107 0.00544974094660195 YOR204W 1155 induced -0.074546 0.151275205377147 -0.0112769614600448 YOR232W 1157 induced 0.02381 0.102128454070202 0.00243167849141151 YOR236W 1158 induced 0.013075 0.116167382374907 0.00151888852455191 YOR261C 1160 induced 0.25001 0.126578136669156 0.0316457999486557 YOR335C 1164 induced 0.03355 0.165458364451083 0.00555112812733384 YPL063W 1167 induced -0.060697 0.13299570575056 -0.00807244035194174 YPL076W 1168 induced 0.040799 0.104436613144137 0.00426090937966765 YPL231W 1173 induced 0.22503 0.130349141150112 0.0293324672330097 YPL243W 1174 induced -0.098375 0.148580563853622 -0.0146166129691001 YPR144C 1177 repressed 0.011204 0.105043876026886 -0.00117691158700523 YPR169W 1178 induced 0.090822 0.139707337565347 0.0126884998123599 YPR178W 1179 induced 0.10337 0.119325522778193 0.0123346792895818 YPR180W 1180 induced 0.0048776 0.115400952203137 0.000562879684466021 YDR054C 1183 induced 0.11266 0.109435212845407 0.0123289710791636 YDR527W 1187 repressed -0.1034 0.125214245705751 0.0129471530059747 YFR037C 1190 induced 0.14967 0.142614824495892 0.0213451607823002 YGL073W 1191 induced -0.01557 0.102510268857356 -0.00159608488610903 YGR090W 1194 repressed -0.019797 0.102833737864078 0.00203579950849515 YGR198W 1196 induced 0.097103 0.151896938013443 0.0147496483719194 YHR205W 1201 induced 0.033585 0.167721247199403 0.00563291808719195 YJL097W 1202 induced 0.090788 0.160467233009709 0.0145684991504855 YKL033W 1204 induced 0.046628 0.147002427184466 0.00685442917475728 YKL082C 1205 induced 0.15674 0.11979789021658 0.0187771213125467 YLR008C 1208 induced 0.22697 0.11082430918596 0.0251537934559373 YLR106C 1209 induced 0.062572 0.11731142643764 0.00734041057505601 YLR229C 1211 induced 0.34835 0.12064787154593 0.0420276860530247 YMR235C 1212 induced 0.26869 0.0982743651979089 0.0264053391850261 YNL149C 1213 induced -0.091137 0.10423497012696 -0.00949966247246075 YNL222W 1214 induced 0.010361 0.107383308439134 0.00111259845873787 YNL245C 1215 induced 0.20607 0.134824029126214 0.0277831876820389 YOR077W 1220 induced 0.0098897 0.103754667662435 0.00102610253678118 YPL075W 1221 induced -0.096837 0.110348207617625 -0.010685789381068 CUP2OE+ 1229 repressed -0.011098 0.123462938760269 0.00137019169436147 GAT3OE+ 1231 induced -0.25573 0.100345407020164 -0.0256613309372665 GAT4OE+ 1232 induced -0.0325025 0.138346713965646 -0.00449661407066841 GIS1OE+ 1234 induced 0.0492465 0.166959484690067 0.00822217026278938 HAC1OE+ 1237 repressed -0.051554 0.110335604929052 0.00568824177651235 HAP4OE+ 1238 repressed 0.007592 0.112578416728902 -0.000854695339805824 MBP1OE+ 1242 induced 0.1066965 0.128601568334578 0.0137213372358103 MGA1OE+ 1245 induced 0.1313005 0.107141056758775 0.0140676743229555 MIG1OE+ 1246 induced 0.1100815 0.172360903659447 0.0189737468161874 MOT3OE+ 1247 induced 0.213284 0.114439880507842 0.0244081954742346 MSN2OE+ 1248 induced 0.259016 0.13738144137416 0.0355839914189694 MSN4OE+ 1249 induced 0.201925 0.133854555638536 0.0270285811473114 RFX1OE+ 1253 induced 0.0404235 0.119234036594473 0.00481985707827668 ROX1OE+ 1256 repressed 0.0997495 0.113110063480209 -0.0112826722771191 SFP1OE+ 1258 induced 0.253705 0.155458364451083 0.039440564353062 SIP4OE+ 1259 induced -0.0860675 0.112653099327857 -0.00969577062640033 SOK2OE+ 1261 induced 0.245985 0.0966266803584765 0.0237687139679798 SPS18OE+ 1262 induced 0.0921165 0.120941467513069 0.0111407046921676 SWI4OE+ 1268 induced 0.0220585 0.117466859596714 0.00259114272241412 TOS8OE+ 1269 induced 0.3021925 0.118298637042569 0.0357489608744865 UPC2OE+ 1270 induced 0.171805 0.137140123226288 0.0235613588708924 XBP1OE+ 1271 induced 0.158699 0.0977809932785661 0.0155177458523152 YHP1OE+ 1273 induced 0.197214 0.13482356235997 0.0265890940272591 YPR015COE+ 1275 induced 0.154506 0.0996671956684093 0.0153991797339432 ZAP1OE+ 1277 induced -0.0204275 0.10767643764003 -0.00219956042989171 WT/cst6+ 1282 induced 0.0895355 0.129381534727409 0.0115842404025859 WT/gis1+ 1288 induced 0.045718 0.112141523525019 0.00512688617251682 WT/msn4+ 1301 repressed -0.0310965 0.108377520537715 0.00337016156740105 WT/rox1+ 1307 induced -0.501018 0.124119678864825 -0.0621861932654969 WT/sok2+ 1312 induced -0.0092885 0.188705190440627 -0.00175278816140776 WT/sps18+ 1313 induced -0.1426395 0.0994851568334578 -0.014190513028146 WT/zap1+ 1328 repressed 0.0469735 0.105807972367438 -0.00497017079000185