-Genomic Data for ESR1 Links
Protein
ESR1
UniPROBE Accession Number
UP01600
Species
Homo sapiens
Domain
NR LBD, NR_C4
Swiss-Prot
P03372
Name and Synonyms
Name: Estrogen receptor.
Synonyms:ER-alpha, Estradiol receptor, Nuclear receptor subfamily 3 group A member 2
IHOP
None Available
NCBI RefSeq
NP_000116.2
Description
Nuclear hormone receptor that is involved in regulation of eukaryotic gene expression, cellular proliferation, and differetiation in target tissues.
JASPAR
MA0112.1
-PBM Motif Data for ESR1_anti-GST
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
AAGGTCAT E.S. 0.493
ATGACCTT E.S. 0.493
Downloads
Download the zip of all ESR1_anti-GST PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for ESR1_1A12
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
GATGACCC E.S. 0.495
GGGTCATC E.S. 0.495
Downloads
Download the zip of all ESR1_1A12 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Download Data for ESR1
Downloads
Download the zip of all ESR1 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-ESR1 Datasets
Clone Clone Type Last Modified Save View
ESR1 Full length clone 2021-07-02 search save
ESR1 Insert Sequence
1    MTMTLHTKAS GMALLHQIQG NELEPLNRPQ LKIPLERPLG EVYLDSSKPA
51   VYNYPEGAAY EFNAAAAANA QVYGQTGLPY GPGSEAAAFG SNGLGGFPPL
101  NSVSPSPLML LHPPPQLSPF LQPHGQQVPY YLENEPSGYT VREAGPPAFY
151  RPNSDNRRQG GRERLASTND KGSMAMESAK ETRYCAVCND YASGYHYGVW
201  SCEGCKAFFK RSIQGHNDYM CPATNQCTID KNRRKSCQAC RLRKCYEVGM
251  MKGGIRKDRR GGRMLKHKRQ RDDGEGRGEV GSAGDMRAAN LWPSPLMIKR
301  SKKNSLALSL TADQMVSALL DAEPPILYSE YDPTRPFSEA SMMGLLTNLA
351  DRELVHMINW AKRVPGFVDL TLHDQVHLLE CAWLEILMIG LVWRSMEHPG
401  KLLFAPNLLL DRNQGKCVEG MVEIFDMLLA TSSRFRMMNL QGEEFVCLKS
451  IILLNSGVYT FLSSTLKSLE EKDHIHRVLD KITDTLIHLM AKAGLTLQQQ
501  HQRLAQLLLI LSHIRHMSNK GMEHLYSMKC KNVVPLYDLL LEMLDAHRLH
551  APTSRGGASV EETDQSHLAT AGSTSSHSLQ KYYITGEAEG FPATV


References
Data are analyzed by array design with AMADID # 030236 in Lai et al. 2020


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