-Genomic Data for POU5F1 Links
Protein
POU5F1
UniPROBE Accession Number
UP01610
Species
Homo sapiens
Domain
Homeobox
Swiss-Prot
Q01860
Name and Synonyms
Name: POU domain, class 5, transcription factor 1.
Synonyms:Octamer-binding protein Oct-3, Octamer-binding protein Oct-4, Octamer-binding transcription factor 3 OTF-3
IHOP
None Available
NCBI RefSeq
NP_002692.2
Description
Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development.
JASPAR
MA1115.1
-PBM Motif Data for POU5F1_anti-GST_rep1
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
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Top Kmer
TATGCATA E.S. 0.498
TATGCATA E.S. 0.498
Downloads
Download the zip of all POU5F1_anti-GST_rep1 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for POU5F1_anti-GST_rep2
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
TATGCATA E.S. 0.491
TATGCATA E.S. 0.491
Downloads
Download the zip of all POU5F1_anti-GST_rep2 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for POU5F1_1A4
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
TATGCATA E.S. 0.496
TATGCATA E.S. 0.496
Downloads
Download the zip of all POU5F1_1A4 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for POU5F1_1D2
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
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PWM
Save
Top Kmer
TATGCATA E.S. 0.485
TATGCATA E.S. 0.485
Downloads
Download the zip of all POU5F1_1D2 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Download Data for POU5F1
Downloads
Download the zip of all POU5F1 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-POU5F1 Datasets
Clone Clone Type Last Modified Save View
POU5F1 Full length clone 2021-07-02 search save
POU5F1 Insert Sequence
1    MAGHLASDFA FSPPPGGGGD GPGGPEPGWV DPRTWLSFQG PPGGPGIGPG
51   VGPGSEVWGI PPCPPPYEFC GGMAYCGPQV GVGLVPQGGL ETSQPEGEAG
101  VGVESNSDGA SPEPCTVTPG AVKLEKEKLE QNPEESQDIK ALQKELEQFA
151  KLLKQKRITL GYTQADVGLT LGVLFGKVFS QTTICRFEAL QLSFKNMCKL
201  RPLLQKWVEE ADNNENLQEI CKAETLVQAR KRKRTSIENR VRGNLENLFL
251  QCPKPTLQQI SHIAQQLGLE KDVVRVWFCN RRQKGKRSSS DYAQREDFEA
301  AGSPFSGGPV SFPLAPGPHF GTPGYGSPHF TALYSSVPFP EGEAFPPVSV
351  TTLGSPMHSN


References
Data are analyzed by array design with AMADID # 030236 in Lai et al. 2020


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