-Genomic Data for USF1 Links
Protein
USF1
UniPROBE Accession Number
UP01613
Species
Homo sapiens
Domain
bHLH
Swiss-Prot
P22415
Name and Synonyms
Name: Upstream stimulatory factor 1.
Synonyms:Class B basic helix-loop-helix protein 11 bHLHb11, Major late transcripton factor 1
IHOP
None Available
NCBI RefSeq
NP_001263302.1
Description
Binds symmetrical DNA sequence(E-boxes) (5\'-CACGTG-3\') that is in viral and cellular promoters.
JASPAR
MA0093.1
-PBM Motif Data for USF1_anti-GST
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
CCACGTG..C E.S. 0.499
G..CACGTGG E.S. 0.499
Downloads
Download the zip of all USF1_anti-GST PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-PBM Motif Data for USF1_1B8
PBM-Derived DNA Binding Site Motif (Seed-And-Wobble)
Image Not Available. We apologize for the inconvenience.
PWM
Save
Top Kmer
ACCACGTG E.S. 0.499
CACGTGGT E.S. 0.499
Downloads
Download the zip of all USF1_1B8 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Download Data for USF1
Downloads
Download the zip of all USF1 PBM files, or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
-USF1 Datasets
Clone Clone Type Last Modified Save View
USF1 Full length clone 2021-07-02 search save
USF1 Insert Sequence
1    MKGQQKTAET EEGTVQIQEG AVATGEDPTS VAIASIQSAA TFPDPNVKYV
51   FRTENGGQVM YRVIQVSEGQ LDGQTEGTGA ISGYPATQSM TQAVIQGAFT
101  SDDAVDTEGT AAETHYTYFP STAVGDGAGG TTSGSTAAVV TTQGSEALLG
151  QATPPGTGQF FVMMSPQEVL QGGSQRSIAP RTHPYSPKSE APRTTRDEKR
201  RAQHNEVERR RRDKINNWIV QLSKIIPDCS MESTKSGQSK GGILSKACDY
251  IQELRQSNHR LSEELQGLDQ LQLDNDVLRQ QVEDLKNKNL LLRAQLRHHG
301  LEVVIKNDSN


References
Data are analyzed by array design with AMADID # 030236 in Lai et al. 2020


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