Protein Details

-Genomic Data				Links
Protein Irf5	UniPROBE Accession Number UP00040	Species Mus musculus	Domain IRF	Uniprot P56477
Name and Synonyms interferon regulatory factor 5 AW491843, Interferon regulatory factor 5, IRF-5, mirf5				IHOP 126496
				RefSeq NP_036187
Description None Available				JASPAR N/A

-PBM Motif Data for Irf5
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer A.CGAAACC E.S. 0.498 GGTTTCG.T E.S. 0.498
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer A.CGAGAAT E.S. 0.479 ATTCTCG.T E.S. 0.479
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3874)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3874)				Consensus YWCGRRYNVN NBNRYYCGWR
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3874)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3874)				Consensus NNNHGADASH DSTHTCDNNN
Downloads Download the zip of all Irf5 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Irf5 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=40&sourceDB=uniprobe

-Irf5 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3874	#1	AMADID #016060	IVT	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3874	#1	AMADID #015681	IVT	DNA binding domain only	2014-08-13
Clone pTH3874 insert sequence `1 NHSAPGIPPP PRRVRLKPWL VAQVNSCQYP GLQWVNGEKK LFYIPWRHAT 51 RHGPSQDGDN TIFKAWAKET GKYTEGVDEA DPAKWKANLR CALNKSRDFQ 101 LFYDGPRDMP PQPYKIYEVC SNGPAPTESQ PTDDYVL` DNA Binding Domains (Pfam) for clone 3874 Region 13..122 `1 RVRLKPWLVA QVNSCQYPGL QWVNGEKKLF YIPWRHATRH GPSQDGDNTI 51 FKAWAKETGK YTEGVDEADP AKWKANLRCA LNKSRDFQLF YDGPRDMPPQ 101 PYKIYEVCSN`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`