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| -Genomic Data |
Links |
- Protein
- Isgf3g
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- UniPROBE Accession Number
- UP00074
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- Species
- Mus musculus
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- Domain
- IRF
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- Uniprot
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Q61179
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- Name and Synonyms
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interferon dependent positive acting transcription factor 3 gamma
IFN-alpha-responsive transcription factor subunit, Interferon-stimulated gene factor 3 gamma, Irf-9, ISGF-3 gamma, ISGF3 p48 subunit, p48, Transcriptional regulator ISGF3 gamma subunit
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- IHOP
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122172
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- RefSeq
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NP_032420
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- Description
- Mus musculus interferon dependent positive acting transcription factor 3 gamma (Isgf3g), mRNA
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- JASPAR
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N/A
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| -PBM Motif Data for Isgf3g |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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AA.CGAAAC E.S. 0.497
GTTTCG.TT E.S. 0.497
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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AAAACA..AC E.S. 0.414
GT..TGTTTT E.S. 0.414
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH2853)
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- PWM
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View
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- Consensus
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DBTTTCNNNN
NNNNGAAAVH
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2853)
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- PWM
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View
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- Consensus
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NHNNRAAANH
DNTTTYNNDN
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- Downloads
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Download the
zip
of all Isgf3g PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Isgf3g
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=74&sourceDB=uniprobe
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| -Isgf3g Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2853 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH2853 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH2853 insert sequence
- 1 ASGKVRCTRK LRSWIVEQVE SGHFPGVCWD DAAKTMFRIP WKHAGKQDFR
51 EDQDAAIFKA WALFKEKHKD GDIGHPAVWK TRLRCALNKS SEFEEVPERG
101 RMDVAEPYKV YRILPAGTLP NQPRNQKSPC K
- DNA Binding Domains (Pfam) for clone 2853
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Region 9..116
1 RKLRSWIVEQ VESGHFPGVC WDDAAKTMFR IPWKHAGKQD FREDQDAAIF
51 KAWALFKEKH KDGDIGHPAV WKTRLRCALN KSSEFEEVPE RGRMDVAEPY
101 KVYRILPA
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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