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| -Genomic Data for Spdef |
Links |
- Protein
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- UniPROBE Accession Number
- UP00406
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- Species
- Mus musculus
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- Domain
- ETS
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- Swiss-Prot
- Q9WTP3
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- Name and Synonyms
- Name: SAM pointed domain containing ets transcription factor.
Synonyms:Pdef, PDEF, Prostate-derived Ets factor, Prostate epithelium-specific Ets transcription factor, Prostate-specific Ets, Pse, SAM pointed domain-containing Ets transcription factor
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- IHOP
- 127351
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- NCBI RefSeq
- NP_038919
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- Description
- Mus musculus prostate specific ets transcription factor (Pse-pending), mRNA
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- JASPAR
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N/A
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| -PBM Motif Data for Spdef |
- PBM-Derived DNA Binding Site Motif
(Seed-And-Wobble)
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- PWM
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Save
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- Top Kmer
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ATCCGGAT E.S. 0.495
ATCCGGAT E.S. 0.495
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- PBM-Derived DNA Binding Site Motif
(BEEML-PBM)
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- PWM
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Save
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- Consensus
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DNVMGGAHNH
DNDTCCKBNH
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- Downloads
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Download the
zip
of all Spdef PBM files
or view the downloads directory for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
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| -Spdef Datasets |
| Gene |
Clone Type |
Last Modified |
Save |
View |
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Spdef |
DNA binding domain only |
2014-08-13 |
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- Spdef Insert Sequence
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1 EGWTDGEVDS SCSGQPIHLW QFLKELLLKP HSYGRFIRWL NKEKGIFKIE
51 DSAQVARLWG VRKNRPAMNY DKLSRSIRQY YKKGIIRKPD ISQRLVYQFV
101 HPV
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- References
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Data are analyzed by array design with AMADID # 015681 in Wei et al., EMBO J 2010
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