Protein Details

-Genomic Data for GSM1				Links
Protein GSM1	UniPROBE Accession Number UP00301	Species Saccharomyces cerevisiae	Domain Zn2Cys6	Uniprot Not Available
Synonyms J0824, Putative 70.4 kDa transcriptional regulatory protein in IME2-MEF2 intergenic region				IHOP 33608
				RefSeq NP_012432
Description Putative zinc cluster protein of unknown function; computationally predicted involvement in oxidative phosphorylation, based on patterns of expression and sequence analysis				SGD YJL103C

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer AA.CTCCGG E.S. 0.496 CCGGAG.TT E.S. 0.496
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus NCGGVVNNNN NNNNBBCCGN
Primary Motif (BEEML-PBM) (AMADID # 016060)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 016060)				Consensus NNCGGNVNNN NNNBNCCGNN
Downloads Download the zip of all Gsm1 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Gsm1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID301&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-GSM1 Datasets
Clone ID	Clone Type	Last Modified	Save	View
y1016	Full length clone	2014-07-16
Insert sequence 1 MTKKLPSELK QTRKSIQTAC EFCHTKHIQC DVGRPCQNCL KRNIGKFCRD 51 KKRKSRKRIE KHGTQPYLNL GKRLVIHDVP SKTVSPSSVH LQRDFLSSDQ 101 EKPGKTPAHN TNIQYTYNIN DNFQSAGSIP RITNFNTNNR QTVLENTSNN 151 ISASQAVHLM NDPIIPTVRK STLNLKSHFL EQHKAMQQPL ATNCLVATSN 201 VPVHSGMDDS NKSDDDVDDE TNIHFDSMWC NDEYMKLKDI VDISTPFLPN 251 NSQIFSLQES EYPNPSASTR GNSSLHLTNL LNSTKSVNDQ KDSSIGHSTS 301 TFNTYDEVVS RPFISLDMLH LNRGANANTH PSHNAKLESE CDSSSHSDAD 351 LEKHDTDFIS PSKFRELVKT PQDLYDNKCL IKPHNYKLAY TKLLTTLRKK 401 FLEGAEIDKS ASVKDEHSTQ KHNLRYDLEV IIRSILERYA PIFISLTSNM 451 IEEDLLLQEV TLQRALLDLE NMAKLVSCTP MCIWRRSGEI CFVSNEFYSL 501 TGFNKNLLLD RTSFIFEYLD HKSVSNYFQI FNELLAFGYN DINKRKKLLM 551 LNACSSTSSK ITEGFSFTTD GKAIFTKCNL LLSNGLYLKC ACCWTVKRDS 601 FNIPILVMGQ LLPIFEMD