-Genomic Data Links
Protein
Pou4f3
UniPROBE Accession Number
UP00118
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
P63955
Name and Synonyms
POU domain, class 4, transcription factor 3
Brain-specific homeobox/POU domain protein 3C, Brn3.1, Brn-3.1, Brn3c, Brn-3c, Brn-3C, ddl, dreidel
IHOP
123685
Description
None Available
RefSeq
NP_620395
Pou4f3 DNA binding domain
1   KRKRTSIAAP EKRSLEAYFA IQPRPSSEKI AAIAEKLDLK KNVVRVWFCN
51  QRQKQKR
JASPAR
None Available
-PBM Motif Data for Pou4f3
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
ATTAATGA (E.S. 0.49890)
TCATTAAT (E.S. 0.49890)
Primary Motif  (BEEML-PBM)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View
Consensus
NNHATWHNNN
NNNDWATDNN
Downloads
Download the zip of all Pou4f3 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou4f3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=118&sourceDB=uniprobe
-Pou4f3 Datasets
Clone ID Expression Expression Method Save View
pTH2791 #1 E. coli save search
Clone pTH2791 insert sequence
1    PHAVAPHSAM PACLSDVESD PRELEAFAER FKQRRIKLGV TQADVGAALA
51   NLKIPGVGSL SQSTICRFES LTLSHNNMIA LKPVLQAWLE EAEAAYREKN
101  SKPELFNGSE RKRKRTSIAA PEKRSLEAYF AIQPRPSSEK IAAIAEKLDL
151  KKNVVRVWFC NQRQKQKRMK YSAVD
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta