Downloads

This page hosts bulk downloads for all transcription factors in the UniPROBE database, organized by publication, and for the SQL tables holding PBM data or factor annotations. These files can be quite large, so please be prepared for significant download times. Please note that any files which contain PBM probe sequences are protected by an academic research use license, which will require confirmation prior to file download. Additionally, the various papers and datasets covered in this database have employed a variety of universal array designs created using various deBruijn sequences. Users interested in the 60-mer probe sequences should download the probe sequences associated with the particular datasets or papers of interest.

If you wish to download individual files for certain transcriptions factors, you can find them most easily using the browse page, which provides an interface for text-based searches. The site's public directory index also makes all database files easily accessible.

All Data

By Publication:

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SQL Data: (Download)

Note: if you want to make use of the database SQL dump, you may need our functions to map k-mers uniquely to and from integers, which is the form in which they are stored in the database. This file will provide you with the algorithm in the form of two different language implementations. Here is a UML diagram illustrating the relationships between the various tables in the database.

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