-Genomic Data Links
Protein
Pou2f3
UniPROBE Accession Number
UP00179
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
P31362
Name and Synonyms
POU domain, class 2, transcription factor 3
Epoc1, Epoc-1, Oct11, Oct-11, Oct-11a, Octamer-binding transcription factor 11, Otf11, Otf-11, Skin, Skin-1a, Skn-1a, Skn-li
IHOP
123676
Description
None Available
RefSeq
NP_035269
Pou2f3 DNA binding domain
1   RKKRTSIETN IRLTLEKRFQ DNPKPSSEEI SMIAEQLSME KEVVRVWFCN
51  RRQKEKR
JASPAR
None Available
-PBM Motif Data for Pou2f3
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
ATGCAAAT (E.S. 0.49853)
ATTTGCAT (E.S. 0.49853)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNWWATKHNN
NNDMATWWNN
Downloads
Download the zip of all Pou2f3 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou2f3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=179&sourceDB=uniprobe
-Pou2f3 Datasets
Clone ID Expression Expression Method Save View
pTH3986 #1 E. coli save search
Clone pTH3986 insert sequence
1    QHLPGPKHLP GPGGNDEPTD LEELEKFAKT FKQRRIKLGF TQGDVGLAMG
51   KLYGNDFSQT TISRFEALNL SFKNMCKLKP LLEKWLNDAE SSPSDPSAST
101  PSSYPTLSEV FGRKRKKRTS IETNIRLTLE KRFQDNPKPS SEEISMIAEQ
151  LSMEKEVVRV WFCNRRQKEK RINCPVATPV KPPIYNSRLV S
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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