-Genomic Data Links
Protein
Hoxb7
UniPROBE Accession Number
UP00206
Species
Mus musculus
Domain
Homeobox
Uniprot
P09024
Name and Synonyms
homeo box B7
AI325018, Homeobox protein Hox-B7, Hox-2.3, Hoxb-7, MH-22B, MUB1
IHOP
121741
Description
None Available
RefSeq
NP_034590
Hoxb7 DNA binding domain
1   KRGRQTYTRY QTLELEKEFH YNRYLTRRRR IEIAHTLCLT ERQIKIWFQN
51  RRMKWKK
JASPAR
None Available
-PBM Motif Data for Hoxb7
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
A.TAATTA.T (E.S. 0.49517)
A.TAATTA.T (E.S. 0.49517)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNWAYNDNN
NNHNRTWNNN
Downloads
Download the zip of all Hoxb7 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Hoxb7 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=206&sourceDB=uniprobe
-Hoxb7 Datasets
Clone ID Expression Expression Method Save View
pTH3953 #1 IVT save search
Clone pTH3953 insert sequence
1   SNFRIYPWMR SSGPDRKRGR QTYTRYQTLE LEKEFHYNRY LTRRRRIEIA
51  HTLCLTERQI KIWFQNRRMK WKKENKTSGP GTTGQDKAEG EEE
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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