-Genomic Data Links
Protein
Pou3f3
UniPROBE Accession Number
UP00211
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
P31361
Name and Synonyms
POU domain, class 3, transcription factor 3
Brain-1, Brain-specific homeobox/POU domain protein 1, Brn1, Brn-1, Brn-1 protein, Otf8, Skin1
IHOP
123680
Description
None Available
RefSeq
NP_032926
Pou3f3 DNA binding domain
1   RKKRTSIEVS VKGALESHFL KCPKPSAQEI TNLADSLQLE KEVVRVWFCN
51  RRQKEKR
JASPAR
None Available
-PBM Motif Data for Pou3f3
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
ATGCATAA (E.S. 0.49749)
TTATGCAT (E.S. 0.49749)
Primary Motif  (BEEML-PBM)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View
Consensus
NNNDVWWDNN
NNHWWBHNNN
Downloads
Download the zip of all Pou3f3 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou3f3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=211&sourceDB=uniprobe
-Pou3f3 Datasets
Clone ID Expression Expression Method Save View
pTH3235 #1 E. coli save search
Clone pTH3235 insert sequence
1    GGAGPGLNSH DPHSDEDTPT SDDLEQFAKQ FKQRRIKLGF TQADVGLALG
51   TLYGNVFSQT TICRFEALQL SFKNMCKLKP LLNKWLEEAD SSTGSPTSID
101  KIAAQGRKRK KRTSIEVSVK GALESHFLKC PKPSAQEITN LADSLQLEKE
151  AVRVWFCNRR QKEKRMTPPG IQQQTPDDVY SQVGT
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta