-Genomic Data Links
Protein
Dobox4
UniPROBE Accession Number
UP00232
Species
Mus musculus
Domain
Homeobox
Uniprot
None Available
Name and Synonyms
None Available
None Available
IHOP
None Available
Description
EST CN720839: E0811A05-5 NIA Mouse four-cell-Embryo cDNA library (Long) Mus musculus cDNA clone NIA:E0811A05 IMAGE:30906628 5-, mRNA sequence
RefSeq
None Available
Dobox4 DNA binding domain
1   RKKRNMPSIE QKLVLKEHFD ESKYLNKEQC KSLAQKLGMK EKQIKTHFKN
51  KRARERR
JASPAR
None Available
-PBM Motif Data for Dobox4
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
AGATACCC (E.S. 0.49716)
GGGTATCT (E.S. 0.49716)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NDDABMYNNN
NNNRKVTHHN
Downloads
Download the zip of all Dobox4 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Dobox4 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=232&sourceDB=uniprobe
-Dobox4 Datasets
Clone ID Expression Expression Method Save View
pTH3956 #1 E. coli save search
Clone pTH3956 insert sequence
1   EVPSGSQDSP NDPGTQRKKR NMPSIEQKLV LKEHFDESKY LNKEQCKSLA
51  QKLGMKEKQI KTHFKNKRAR ERRKKSQQPP GKIGSKPHCR PTN
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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