|
|
| -Genomic Data for UME6 |
Links |
- Protein
- UME6
|
- UniPROBE Accession Number
- UP00334
|
- Species
- Saccharomyces cerevisiae
|
- Domain
- Zn2Cys6
|
- Uniprot
- P39001
|
- Synonyms
- CAR80, CARGR1, Negative transcriptional regulator of IME2, NIM2, RIM16, Transcriptional regulator UME6, YD8142.04C, YDR207C
|
- IHOP
- 32212
|
- RefSeq
- NP_010493
|
- Description
- Key transcriptional regulator of early meiotic genes, binds URS1 upstream regulatory sequence, couples metabolic responses to nutritional cues with initiation and progression of meiosis, forms comp...
|
- SGD
-
YDR207C
|
| -PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
GGCGGCTA E.S. 0.495
TAGCCGCC E.S. 0.495
|
- Primary Motif (BEEML-PBM) (AMADID # 015681)
-
|
- Primary PWM
-
View
|
- Consensus
-
NWNSCGCBNN
NNVGCGSNWN
|
- Primary Motif (BEEML-PBM) (AMADID # 016060)
-
|
- Primary PWM
-
View
|
- Consensus
-
NWNSCGCBNN
NNVGCGSNWN
|
- Downloads
-
Download the
zip
of all Ume6 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Ume6
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID334&sourceDB=uniprobe
|
| -Annotations |
- Target Gene Functional Category Enrichment
-
1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
-
2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
|
- Conditional Specificity
-
1) Specific conditions (view)
-
2) Condition categories (view)
|
| -UME6 Datasets |
| Clone ID |
Clone Type |
Last Modified |
Save |
View |
|
y1100
|
DNA binding domain only |
2016-03-24 |
|
|
- Insert sequence
- 1 KGKNVKPKAK SKAKQSSKKR PNNTTSKSKA NNSQESNNAT SSTSQGTRSR
51 TGCWICRLRK KKCTEERPHC FNCERLKLDC HYDAFKPDFV SDPKKKQMKL
101 EEIKKKTKEA KRRAMKKK
|
|