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| -Genomic Data |
Links |
- Protein
- Smad3
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- UniPROBE Accession Number
- UP00000
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- Species
- Mus musculus
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- Domain
- DWA
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- Uniprot
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Q8BUN5
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- Name and Synonyms
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MAD homolog 3 (Drosophila)
AU022421, Mad3, Madh3, mMad3, Mothers against decapentaplegic homolog 3, Mothers against DPP homolog 3, Smad 3, SMAD 3
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- IHOP
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122640
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- RefSeq
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NP_058049
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- Description
- None Available
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- JASPAR
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N/A
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| -PBM Motif Data for Smad3 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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A.CCAGACA E.S. 0.493
TGTCTGG.T E.S. 0.493
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CCCGCCA..C E.S. 0.480
G..TGGCGGG E.S. 0.480
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3805)
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- PWM
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View
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- Consensus
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NHGTCTVNNN
NNNBAGACDN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3805)
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- PWM
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View
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- Consensus
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NNCMAANNNN
NNNNTTKGNN
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- Downloads
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Download the
zip
of all Smad3 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Smad3
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=0&sourceDB=uniprobe
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| -Smad3 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3805 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3805 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2016-03-24 |
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- Clone pTH3805 insert sequence
- 1 IVKRLLGWKK GEQNGQEEKW CEKAVKSLVK KLKKTGQLDE LEKAITTQNV
51 NTKCITIPRS LDGRLQVSHR KGLPHVIYCR LWRWPDLHSH HELRAMELCE
101 FAFNMKKDEV CVNPYHYQRV ETPVLPPVLV PRHTEIPAE
- DNA Binding Domains (Pfam) for clone 3805
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Region 18..121
1 EKWCEKAVKS LVKKLKKTGQ LDELEKAITT QNVNTKCITI PRSLDGRLQV
51 SHRKGLPHVI YCRLWRWPDL HSHHELRAME LCEFAFNMKK DEVCVNPYHY
101 QRVE
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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