Protein Details

-Genomic Data				Links
Protein Irf6	UniPROBE Accession Number UP00011	Species Mus musculus	Domain IRF	Uniprot Q8C2Z7
Name and Synonyms interferon regulatory factor 6 AI876454, E230028I05Rik, mirf6				IHOP 129015
				RefSeq NP_058547
Description None Available				JASPAR N/A

-PBM Motif Data for Irf6
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer A.CGAAACC E.S. 0.494 GGTTTCG.T E.S. 0.494
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer A.TCTCGGT E.S. 0.465 ACCGAGA.T E.S. 0.465
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3803)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH3803)				Consensus NNNHGAWASB VSTWTCDNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3803)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3803)				Consensus NNHGADACNN NNGTHTCDNN
Downloads Download the zip of all Irf6 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Irf6 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=11&sourceDB=uniprobe

-Irf6 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3803	#1	AMADID #016060	E. coli	DNA binding domain only	2016-03-24
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH3803	#1	AMADID #015681	E. coli	DNA binding domain only	2016-03-24
Clone pTH3803 insert sequence `1 ALHPRRVRLK PWLVAQVDSG LYPGLIWLHR DSKRFQIPWK HATRHSPQQE 51 EENTIFKAWA VETGKYQEGV DDPDPAKWKA QLRCALNKSR EFNLMYDGTK 101 EVPMNPVKIY QVCDIPQTQG SVINPGSTGS AP` DNA Binding Domains (Pfam) for clone 3803 Region 6..117 `1 RVRLKPWLVA QVDSGLYPGL IWLHRDSKRF QIPWKHATRH SPQQEEENTI 51 FKAWAVETGK YQEGVDDPDP AKWKAQLRCA LNKSREFNLM YDGTKEVPMN 101 PVKIYQVCDI PQ`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`