-Genomic Data Links
Protein
Zbtb12
UniPROBE Accession Number
UP00019
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
zinc finger and BTB domain containing 12
Bat9, Bat-9, BC020447, G10, NG35
Description
Mus musculus zinc finger and BTB domain containing 12
-PBM Motif Data for Zbtb12
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
GTTCTAGA E.S. 0.499
TCTAGAAC E.S. 0.499
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
C.TTAGAAC E.S. 0.461
GTTCTAA.G E.S. 0.461
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2932)
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PWM
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Consensus
BYTAGWACVY
RBGTWCTARV
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2932)
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PWM
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Consensus
GTTCTAGRNN
NNYCTAGAAC
Downloads
Download the zip of all Zbtb12 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Zbtb12 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=19&sourceDB=uniprobe

-Zbtb12 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2932 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2932 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2932 insert sequence
1    GPLPGGFSSG NPLKNIKCTK CPEVFQGVEK LVFHMRAQHF IFMCPRCGKQ
51   FNHSSNLNRH MNVHRGVKSH SCGICGKCFT QKSTLHDHLN LHSGARPYRC
101  SYCDVRFAHK PAIRRHLKEQ HGKTTAENVL EAGLAE

DNA Binding Domains (Pfam) for clone 2932
Region 42..64
1   FMCPRCGKQF NHSSNLNRHM NVH

Region 70..92
1   HSCGICGKCF TQKSTLHDHL NLH

Region 98..121
1   YRCSYCDVRF AHKPAIRRHL KEQH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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