-Genomic Data Links
Protein
Tcfap2e
UniPROBE Accession Number
UP00028
Species
Mus musculus
Domain
AP-2
Name and Synonyms
transcription factor AP-2, epsilon
AI505200, AP-2e
Description
None Available
-PBM Motif Data for Tcfap2e
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
GCCT.AGGC E.S. 0.498
GCCT.AGGC E.S. 0.498
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
C..GAAAAAA E.S. 0.425
TTTTTTC..G E.S. 0.425
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH3713)
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PWM
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Consensus
NGCCYBVGGS
SCCBVRGGCN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3713)
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PWM
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Consensus
HGCCBBVGGS
SCCBVVGGCD
Downloads
Download the zip of all Tcfap2e PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Tcfap2e in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=28&sourceDB=uniprobe

-Tcfap2e Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3713 #1 AMADID #016060 IVT DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3713 #1 AMADID #015681 IVT DNA binding domain only 2016-03-24 save search
Clone pTH3713 insert sequence
1    TLALSKDSLV GGISNPSEVF CSVPGRLSLL SSTSKYKVTV GEVQRRLSPP
51   ECLNASLLGG VLRRAKSKNG SRCLRERLEK IGLNLPAGRR KAANVTLLTS
101  LVEGEAVHLA RDFGYVCETE FPAKAAAEYL CRQHADPGEL HSRKSMLLAA
151  KQICKEFADL MAQDRSPLGN SRPALILEPG VQSCLTHFSL ITHGFGGPAI
201  CAALTAFQNY LLESLKGLEK MFLSGAGGGH GESKASEK

DNA Binding Domains (Pfam) for clone 3713
Region 16..223
1    PSEVFCSVPG RLSLLSSTSK YKVTVGEVQR RLSPPECLNA SLLGGVLRRA
51   KSKNGSRCLR ERLEKIGLNL PAGRRKAANV TLLTSLVEGE AVHLARDFGY
101  VCETEFPAKA AAEYLCRQHA DPGELHSRKS MLLAAKQICK EFADLMAQDR
151  SPLGNSRPAL ILEPGVQSCL THFSLITHGF GGPAICAALT AFQNYLLESL
201  KGLEKMFL
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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