-Genomic Data Links
Protein
Sox14
UniPROBE Accession Number
UP00004
Species
Mus musculus
Domain
HMG_box
Name and Synonyms
SRY-box containing gene 14
Sox-14, Transcription factor SOX-14
Description
Mus musculus SRY-box containing gene 14, mRNA
-PBM Motif Data for Sox14
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
ATTATAAT E.S. 0.484
ATTATAAT E.S. 0.484
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
A.ACAATGG E.S. 0.478
CCATTGT.T E.S. 0.478
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2677)
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PWM
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Consensus
WTTVTNNNNN
NNNNNABAAW
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2677)
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PWM
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Consensus
WTTVWNNNNN
NNNNNWBAAW
Downloads
Download the zip of all Sox14 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Sox14 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=4&sourceDB=uniprobe

-Sox14 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2677 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2677 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2677 insert sequence
1    PAPARLAGTM SKPSDHIKRP MNAFMVWSRG QRRKMAQENP KMHNSEISKR
51   LGAEWKLLSE AEKRPYIDEA KRLRAQHMKE HPDYKYRPRR KPKNLLKKDR
101  Y

DNA Binding Domains (Pfam) for clone 2677
Region 17..85
1   IKRPMNAFMV WSRGQRRKMA QENPKMHNSE ISKRLGAEWK LLSEAEKRPY
51  IDEAKRLRAQ HMKEHPDYK
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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