-Genomic Data Links
Protein
Mafb
UniPROBE Accession Number
UP00045
Species
Mus musculus
Domain
BRLZ
Name and Synonyms
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
kr, Kreisler, Krml, Krml1, Maf1, Segmentation protein KR, Transcription factor MAF1, Transcription factor MafB, V-maf musculoaponeurotic fibrosarcoma oncogene homolog B
Description
Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) (Mafb), mRNA
-PBM Motif Data for Mafb
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
A..TGCTGAC E.S. 0.495
GTCAGCA..T E.S. 0.495
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
TTGCA.AAA E.S. 0.445
TTT.TGCAA E.S. 0.445
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2914)
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PWM
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Consensus
NNNNVDVNHN
NDNBHBNNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2914)
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PWM
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Consensus
WDNYGMTKAB
VTMAKCRNHW
Downloads
Download the zip of all Mafb PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Mafb in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=45&sourceDB=uniprobe

-Mafb Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2914 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2914 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2914 insert sequence
1    ATAAATAAGG NGSVEDRFSD DQLVSMSVRE LNRHLRGFTK DEVIRLKQKR
51   RTLKNRGYAQ SCRYKRVQQK HHLENEKTQL IQQVEQLKQE VSRLARERDA
101  YKVKCEKLAN SGFREAGSTS DSPSS

DNA Binding Domains (Pfam) for clone 2914
Region 16..110
1   DRFSDDQLVS MSVRELNRHL RGFTKDEVIR LKQKRRTLKN RGYAQSCRYK
51  RVQQKHHLEN EKTQLIQQVE QLKQEVSRLA RERDAYKVKC EKLAN
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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