|
|
| -Genomic Data |
Links |
- Protein
- Tcfe2a
|
- UniPROBE Accession Number
- UP00046
|
- Species
- Mus musculus
|
- Domain
- HLH
|
- Uniprot
-
P15806
|
- Name and Synonyms
-
transcription factor E2a
A1, AA408400, Alf2, ALF2, AW209082, E12, E12/E47, E2A, E47, Immunoglobulin enhancer-binding factor E12/E47, Me2, ME2, Pan1, Pan2, Tcf3, TCF3, TCF-3, Transcription factor 3, Transcription factor A1, Transcription factor E2-alpha, VDIR
|
- IHOP
-
125393
|
- RefSeq
-
NP_035678
|
- Description
- None Available
|
- JASPAR
-
N/A
|
| -PBM Motif Data for Tcfe2a |
- Primary Motif (Seed-And-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
ACAGGTGC E.S. 0.497
GCACCTGT E.S. 0.497
|
- Secondary Motif (Seed-And-Wobble)
-
|
- Secondary PWM
-
View
Save
|
- Top Kmer
-
CAGATGTC E.S. 0.492
GACATCTG E.S. 0.492
|
-
Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3865)
-
|
- PWM
-
View
|
- Consensus
-
NVCACCTGBN
NVCAGGTGBN
|
-
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3865)
-
|
- PWM
-
View
|
- Consensus
-
NVCAGGTGBN
NVCACCTGBN
|
- Downloads
-
Download the
zip
of all Tcfe2a PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Tcfe2a
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=46&sourceDB=uniprobe
|
| -Tcfe2a Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH3865 |
#1 |
AMADID #016060 |
IVT |
DNA binding domain only |
2016-03-24 |
|
|
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH3865 |
#1 |
AMADID #015681 |
IVT |
DNA binding domain only |
2016-03-24 |
|
|
- Clone pTH3865 insert sequence
- 1 HPEEGLTSGA SLLHNHASLP SQPSSLPDLS QRPPDSYSGL GRAGTTAGAS
51 EIKREEKEDE EIASVADAEE DKKDLKVPRT RTSSTDEVLS LEEKDLRDRE
101 RRMANNARER VRVRDINEAF RELGRMCQLH LKSDKAQTKL LILQQAVQVI
151 LGLEQQVRER NLNPKAACLK RREEEKVSGV VGDPQLPLSA AHPGLGEAHN
201 PAGHL
- DNA Binding Domains (Pfam) for clone 3865
-
Region 101..154
1 RRMANNARER VRVRDINEAF RELGRMCQLH LKSDKAQTKL LILQQAVQVI
51 LGLE
-
|
- References
-
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
|
|