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| -Genomic Data |
Links |
- Protein
- Bhlhb2
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- UniPROBE Accession Number
- UP00050
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- Species
- Mus musculus
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- Domain
- HLH
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- Uniprot
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O35185
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- Name and Synonyms
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basic helix-loop-helix domain containing, class B2
bHLHB2, C130042M06Rik, Class B basic helix-loop-helix protein 2, Clast5, CR8, cytokine response gene 8, Dec1, DEC1, E47 interaction protein 1, eip1 (E47 interaction protein 1), eipl, Sharp2, Stimulated with retinoic acid 13, Stra13, Stra14
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- IHOP
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124929
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- RefSeq
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NP_035628
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- Description
- Mus musculus basic helix-loop-helix domain containing, class B2
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- JASPAR
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N/A
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| -PBM Motif Data for Bhlhb2 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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TCACGTGA E.S. 0.499
TCACGTGA E.S. 0.499
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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T.CACGTG.A E.S. 0.496
T.CACGTG.A E.S. 0.496
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH1274)
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- PWM
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View
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- Consensus
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NKCACGHGNN
NNCDCGTGMN
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH4971)
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- PWM
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View
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- Consensus
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NNCACGTGMN
NKCACGTGNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH4971)
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- PWM
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View
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- Consensus
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NCACGTGMBN
NVKCACGTGN
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- Downloads
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Download the
zip
of all Bhlhb2 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Bhlhb2
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=50&sourceDB=uniprobe
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| -Bhlhb2 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1274 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1274 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH4971 |
#1 |
AMADID #016060 |
E. coli |
Full length clone |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH4971 |
#1 |
AMADID #015681 |
E. coli |
Full length clone |
2016-03-24 |
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- Clone pTH1274 insert sequence
- 1 KSRRGIKRSE DSKETYKLPH RLIEKKRRDR INECIAQLKD LLPEHLKLTT
51 LGHLEKAVVL ELTLKHVKAL TNLIDQQQQK IIALQSGLQA G
- DNA Binding Domains (Pfam) for clone 1274
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Region 16..71
1 YKLPHRLIEK KRRDRINECI AQLKDLLPEH LKLTTLGHLE KAVVLELTLK
51 HVKALT
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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- Clone pTH4971 insert sequence
- 1 MERIPSAQPP PACLPKAPGL EHGDLPGMYP AHMYQVYKSR RGIKRSEDSK
51 ETYKLPHRLI EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT
101 LKHVKALTNL IDQQQQKIIA LQSGLQAGEL SGRNVETGQE MFCSGFQTCA
151 REVLQYLAKH ENTRDLKSSQ LVTHLHRVVS ELLQGGTSRK PSDPAPKVMD
201 FKEKPSSPAK GSEGPGKNCV PVIQRTFAHS SGEQSGSDTD TDSGYGGESE
251 KGDLRSEQPC FKSDHGRRFT MGERIGAIKQ ESEEPPTKKN RMQLSDDEGH
301 FTSSDLISSP FLGPHPHQPP FCLPFYLIPP SATAYLPMLE KCWYPTSVPV
351 LYPGLNASAA ALSSFMNPDK ISAPLLMPQR LPSPLPAHPS VDSSVLLQAL
401 KPIPPLNLET KD
- DNA Binding Domains (Pfam) for clone 4971
- Not Available
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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