-Genomic Data Links
Protein
Osr2
UniPROBE Accession Number
UP00052
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
odd-skipped related 2 (Drosophila)
Protein odd-skipped-related 2
Description
odd-skipped related 2 (Drosophila) (Osr2), mRNA
-PBM Motif Data for Osr2
Primary Motif (Seed-And-Wobble)
Image Not Available.  We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
ACAGTAGC E.S. 0.498
GCTACTGT E.S. 0.498
Secondary Motif (Seed-And-Wobble)
Image Not Available.  We apologize for the inconvenience.
Secondary PWM
View       Save
Top Kmer
GCTACCTA E.S. 0.431
TAGGTAGC E.S. 0.431
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH1727)
Image Not Available.  We apologize for the inconvenience.
PWM
View
Consensus
NGCTWCYGNN
NNCRGWAGCN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1727)
Image Not Available.  We apologize for the inconvenience.
PWM
View
Consensus
NNCRGWAGCN
NGCTWCYGNN
Downloads
Download the zip of all Osr2 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Osr2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=52&sourceDB=uniprobe

-Osr2 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1727 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1727 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH1727 insert sequence
1    RKPSRGRLPS KTKKEFICKF CGRHFTKSYN LLIHERTHTD ERPYTCDICH
51   KAFRRQDHLR DHRYIHSKEK PFKCQECGKG FCQSRTLAVH KTLHMQTSSP
101  TAASSAAKC

DNA Binding Domains (Pfam) for clone 1727
Region 16..38
1   FICKFCGRHF TKSYNLLIHE RTH

Region 44..66
1   YTCDICHKAF RRQDHLRDHR YIH

Region 72..94
1   FKCQECGKGF CQSRTLAVHK TLH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta