|
|
| -Genomic Data |
Links |
- Protein
- Tcf3
|
- UniPROBE Accession Number
- UP00058
|
- Species
- Mus musculus
|
- Domain
- HMG_box
|
- Uniprot
-
Q9Z1J1
|
- Name and Synonyms
-
transcription factor 3
HMG box transcription factor 3, mTCF-3, Tcf-3, TCF-3, Tcf7l1, Transcription factor 7-like 1
|
- IHOP
-
125386
|
- RefSeq
-
NP_033358
|
- Description
- None Available
|
- JASPAR
-
N/A
|
| -PBM Motif Data for Tcf3 |
- Primary Motif (Seed-And-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
A.ATCAAAG E.S. 0.495
CTTTGAT.T E.S. 0.495
|
- Secondary Motif (Seed-And-Wobble)
-
|
- Secondary PWM
-
View
Save
|
- Top Kmer
-
C.AAAAAAA E.S. 0.406
TTTTTTT.G E.S. 0.406
|
-
Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3787)
-
|
- PWM
-
View
|
- Consensus
-
NHHWNNNNNN
NNNNNNWDDN
|
-
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3787)
-
|
- PWM
-
View
|
- Consensus
-
NNNNNNWHDN
NHDWNNNNNN
|
- Downloads
-
Download the
zip
of all Tcf3 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Tcf3
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=58&sourceDB=uniprobe
|
| -Tcf3 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH3787 |
#1 |
AMADID #016060 |
IVT |
DNA binding domain only |
2016-03-24 |
|
|
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH3787 |
#1 |
AMADID #015681 |
IVT |
DNA binding domain only |
2016-03-24 |
|
|
- Clone pTH3787 insert sequence
- 1 AKSPVTVKKE EEKKPHVKKP LNAFMLYMKE MRAKVVAECT LKESAAINQI
51 LGRKWHNLSR EEQAKYYELA RKERQLHAQL YPTWSARDNY GKKKKRKREK
101 Q
- DNA Binding Domains (Pfam) for clone 3787
-
Region 17..85
1 VKKPLNAFML YMKEMRAKVV AECTLKESAA INQILGRKWH NLSREEQAKY
51 YELARKERQL HAQLYPTWS
-
|
- References
-
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
|
|