-Genomic Data Links
Protein
Zfp161
UniPROBE Accession Number
UP00065
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
zinc finger protein 161
ZF5, Zfp-161, Zfp5, Zfp-5, Zinc finger protein 161, Zinc finger protein 5
Description
Mus musculus zinc finger protein 161
-PBM Motif Data for Zfp161
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
G.GCGCGC.C E.S. 0.499
G.GCGCGC.C E.S. 0.499
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
CGCGCA..GC E.S. 0.480
GC..TGCGCG E.S. 0.480
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2858)
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PWM
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Consensus
NNNCGYGCNN
NNGCRCGNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2858)
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PWM
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Consensus
NNNCDCGNNN
NNNCGHGNNN
Downloads
Download the zip of all Zfp161 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Zfp161 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=65&sourceDB=uniprobe

-Zfp161 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2858 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2858 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2858 insert sequence
1    DMKFEYLLYG HHREQIACQA CGKTFSDEGR LRKHEKLHTA DRPFVCEMCT
51   KGFTTQAHLK EHLKIHTGYK PYSCEVCGKS FIRAPDLKKH ERVHSNERPF
101  ACHMCDKAFK HKSHLKDHER RHRGEKPFVC GSCTKAFAKA SDLKRHENNM
151  HSERKQVTPS AIQSET

DNA Binding Domains (Pfam) for clone 2858
Region 16..38
1   IACQACGKTF SDEGRLRKHE KLH

Region 44..66
1   FVCEMCTKGF TTQAHLKEHL KIH

Region 72..94
1   YSCEVCGKSF IRAPDLKKHE RVH

Region 100..122
1   FACHMCDKAF KHKSHLKDHE RRH

Region 128..151
1   FVCGSCTKAF AKASDLKRHE NNMH
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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