-Genomic Data Links
Protein
Lef1
UniPROBE Accession Number
UP00067
Species
Mus musculus
Domain
HMG_box
Name and Synonyms
lymphoid enhancer binding factor 1
3000002B05, AI451430, Lef-1, LEF-1, Lymphoid enhancer-binding factor 1, lymphoid enhancer factor 1
Description
None Available
-PBM Motif Data for Lef1
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CTTTGATC E.S. 0.498
GATCAAAG E.S. 0.498
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
ATCAATCA E.S. 0.476
TGATTGAT E.S. 0.476
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH3504)
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PWM
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Consensus
BBTTTGAWSN
NSWTCAAAVV
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3504)
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PWM
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Consensus
NNHDWNWNNN
NNNWNWHDNN
Downloads
Download the zip of all Lef1 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Lef1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=67&sourceDB=uniprobe

-Lef1 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3504 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3504 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH3504 insert sequence
1    KPQHEQRKEQ EPKRPHIKKP LNAFMLYMKE MRANVVAECT LKESAAINQI
51   LGRRWHALSR EEQAKYYELA RKERQLHMQL YPGWSARDNY GKKKKRKREK
101  L

DNA Binding Domains (Pfam) for clone 3504
Region 17..85
1   IKKPLNAFML YMKEMRANVV AECTLKESAA INQILGRRWH ALSREEQAKY
51  YELARKERQL HMQLYPGWS
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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