-Genomic Data Links
Protein
Srf
UniPROBE Accession Number
UP00077
Species
Mus musculus
Domain
MADS
Name and Synonyms
serum response factor
AW049942, AW240594
Description
None Available
-PBM Motif Data for Srf
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CC.TATA.GG E.S. 0.499
CC.TATA.GG E.S. 0.499
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
T..AAAAAAA E.S. 0.457
TTTTTTT..A E.S. 0.457
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH3509)
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PWM
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Consensus
NNNNNNNNNN
NNNNNNNNNN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3509)
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PWM
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Consensus
NNNNNNNNNN
NNNNNNNNNN
Downloads
Download the zip of all Srf PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Srf in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=77&sourceDB=uniprobe

-Srf Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3509 #1 AMADID #016060 IVT DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3509 #1 AMADID #015681 IVT DNA binding domain only 2016-03-24 save search
Clone pTH3509 insert sequence
1    PVSGAVSGAK PGKKTRGRVK IKMEFIDNKL RRYTTFSKRK TGIMKKAYEL
51   STLTGTQVLL LVASETGHVY TFATRKLQPM ITSETGKALI QTCLNSPDSP
101  PRSDP

DNA Binding Domains (Pfam) for clone 3509
Region 24..74
1   EFIDNKLRRY TTFSKRKTGI MKKAYELSTL TGTQVLLLVA SETGHVYTFA
51  T
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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