-Genomic Data Links
Protein
Mybl1
UniPROBE Accession Number
UP00081
Species
Mus musculus
Domain
SANT
Name and Synonyms
myeloblastosis oncogene-like 1
Amyb, A-myb, A-Myb, MGC123416, Myb-related protein A
Description
myeloblastosis oncogene-like 1 (Mybl1), mRNA
-PBM Motif Data for Mybl1
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
AACCGTTA E.S. 0.496
TAACGGTT E.S. 0.496
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
CCAACTG.C E.S. 0.493
G.CAGTTGG E.S. 0.493
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH1717)
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PWM
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Consensus
GTKDACGDNN
NNHCGTHMAC
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1717)
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PWM
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Consensus
NNDDCVGTTD
HAACBGHHNN
Downloads
Download the zip of all Mybl1 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Mybl1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=81&sourceDB=uniprobe

-Mybl1 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1717 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH1717 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH1717 insert sequence
1    HDYEVPQQKG LKKLWNRVKW TRDEDDKLKK LVEQHGTDDW TLIASHLQNR
51   SDFQCQHRWQ KVLNPELIKG PWTKEEDQRV IELVQKYGPK RWSLIAKHLK
101  GRIGKQCRER WHNHLNPEVK KSSWTEEEDR IIYEAHKRLG NRWAEIAKLL
151  PGRTDNSIKN HWNSTMRRKV EQEGYLQDGI KSE

DNA Binding Domains (Pfam) for clone 1717
Region 17..63
1   RVKWTRDEDD KLKKLVEQHG TDDWTLIASH LQNRSDFQCQ HRWQKVL

Region 69..115
1   KGPWTKEEDQ RVIELVQKYG PKRWSLIAKH LKGRIGKQCR ERWHNHL

Region 121..166
1   KSSWTEEEDR IIYEAHKRLG NRWAEIAKLL PGRTDNSIKN HWNSTM
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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