-Genomic Data Links
Protein
Tcf7l2
UniPROBE Accession Number
UP00083
Species
Mus musculus
Domain
HMG_box
Name and Synonyms
transcription factor 7-like 2, T-cell specific, HMG-box
transcription factor 7-like 2, T-cell specific, HMG-box
Description
None Available
-PBM Motif Data for Tcf7l2
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CTTTGATC E.S. 0.497
GATCAAAG E.S. 0.497
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
ATCAATCA E.S. 0.469
TGATTGAT E.S. 0.469
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH3461)
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PWM
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Consensus
NSWTCAAAVN
NBTTTGAWSN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3461)
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PWM
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Consensus
NNWWNAADNN
NNHTTNWWNN
Downloads
Download the zip of all Tcf7l2 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Tcf7l2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=83&sourceDB=uniprobe

-Tcf7l2 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3461 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH3461 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH3461 insert sequence
1    SKHQDSKKEE EKKKPHIKKP LNAFMLYMKE MRAKVVAECT LKESAAINQI
51   LGRRWHALSR EEQAKYYELA RKERQLHMQL YPGWSARDNY GKKKKRKRDK
101  Q

DNA Binding Domains (Pfam) for clone 3461
Region 17..85
1   IKKPLNAFML YMKEMRAKVV AECTLKESAA INQILGRRWH ALSREEQAKY
51  YELARKERQL HMQLYPGWS
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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