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| -Genomic Data |
Links |
- Protein
- Sfpi1
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- UniPROBE Accession Number
- UP00085
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- Species
- Mus musculus
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- Domain
- ETS
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- Uniprot
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P17433
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- Name and Synonyms
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SFFV proviral integration 1
31 kDa transforming protein, Dis1, Dis-1, PU.1, SFFV proviral integration 1 protein, Sfpi-1, Spi1, Spi-1, Tcfpu1, Tfpu.1, Transcription factor PU.1
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- IHOP
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124558
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- RefSeq
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NP_035485
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- Description
- Mus musculus SFFV proviral integration 1 (Sfpi1), mRNA
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- JASPAR
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N/A
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| -PBM Motif Data for Sfpi1 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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A.G.GGAAGT E.S. 0.492
ACTTCC.C.T E.S. 0.492
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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AATT..GGAA E.S. 0.467
TTCC..AATT E.S. 0.467
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH1034)
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- PWM
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View
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- Consensus
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NNNVGGAAVH
DBTTCCBNNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1034)
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- PWM
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View
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- Consensus
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NNNVGGAAVH
DBTTCCBNNN
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- Downloads
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Download the
zip
of all Sfpi1 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Sfpi1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=85&sourceDB=uniprobe
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| -Sfpi1 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1034 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1034 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1034 |
#2 |
AMADID #016060 |
IVT |
DNA binding domain only |
2016-03-24 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1034 |
#2 |
AMADID #015681 |
IVT |
DNA binding domain only |
2016-03-24 |
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- Clone pTH1034 insert sequence
- 1 EPGPGLLHGE TGSKKKIRLY QFLLDLLRSG DMKDSIWWVD KDKGTFQFSS
51 KHKEALAHRW GIQKGNRKKM TYQKMARALR NYGKTGEVKK VKKKLTYQFS
101 GEVLGRGGLA ERRLPPH
- DNA Binding Domains (Pfam) for clone 1034
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Region 16..102
1 KIRLYQFLLD LLRSGDMKDS IWWVDKDKGT FQFSSKHKEA LAHRWGIQKG
51 NRKKMTYQKM ARALRNYGKT GEVKKVKKKL TYQFSGE
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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