-Genomic Data Links
Protein
Nr2f2
UniPROBE Accession Number
UP00009
Species
Mus musculus
Domain
ZnF_C4
Name and Synonyms
nuclear receptor subfamily 2, group F, member 2
2700033K02Rik, 9430015G03Rik, Apolipoprotein AI regulatory protein 1, Aporp1, Arp1, Arp-1, ARP-1, COUP-TF2, COUPTFB, COUP-TFII, COUP-TF II, COUP transcription factor 2, SVP40, Tcfcoup2, Tfcoup2
Description
Mus musculus nuclear receptor subfamily 2, group F, member 2 (Nr2f2), transcript variant 1, mRNA.
-PBM Motif Data for Nr2f2
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
AAAGGTCA E.S. 0.496
TGACCTTT E.S. 0.496
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
CCGGGTCA E.S. 0.493
TGACCCGG E.S. 0.493
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH2192)
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PWM
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Consensus
NRRGGTCANN
NNTGACCYYN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2192)
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PWM
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Consensus
NNTGACCYYN
NRRGGTCANN
Downloads
Download the zip of all Nr2f2 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Nr2f2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=9&sourceDB=uniprobe

-Nr2f2 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2192 #1 AMADID #016060 E. coli DNA binding domain only 2016-03-24 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH2192 #1 AMADID #015681 E. coli DNA binding domain only 2016-03-24 save search
Clone pTH2192 insert sequence
1    QTAAGGQGGP GGPGSDKQQQ QQHIECVVCG DKSSGKHYGQ FTCEGCKSFF
51   KRSVRRNLSY TCRANRNCPI DQHHRNQCQY CRLKKCLKVG MRREAVQRGR
101  MPPTQPTH

DNA Binding Domains (Pfam) for clone 2192
Region 24..99
1   IECVVCGDKS SGKHYGQFTC EGCKSFFKRS VRRNLSYTCR ANRNCPIDQH
51  HRNQCQYCRL KKCLKVGMRR EAVQRG
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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